PDB Chemical Component PB2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PB2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CDB |
CDC |
1.373 |
1.380 |
CDB |
CDA |
1.492 |
1.394 |
CDC |
CDD |
1.424 |
1.383 |
CDD |
CDE |
1.453 |
1.384 |
CDE |
CDF |
1.402 |
1.380 |
CDF |
CDA |
1.380 |
1.393 |
CDA |
CCD |
1.529 |
1.484 |
CCD |
CCE |
1.366 |
1.394 |
CCD |
CCC |
1.476 |
1.394 |
CCE |
CCF |
1.430 |
1.380 |
CCF |
CCA |
1.441 |
1.384 |
CCC |
CCB |
1.371 |
1.380 |
CCB |
CCA |
1.442 |
1.383 |
CCA |
CAA |
1.530 |
1.508 |
CAA |
NAB |
1.470 |
1.465 |
NAB |
CAF |
1.327 |
1.369 |
NAB |
CAC |
1.451 |
1.350 |
CAF |
CAE |
1.412 |
1.346 |
CAE |
NAD |
1.389 |
1.341 |
NAD |
CAC |
1.323 |
1.305 |
CDB |
HDB |
1.080 |
1.080 |
CDC |
HDC |
1.080 |
1.080 |
CDD |
HDD |
1.080 |
1.080 |
CDE |
HDE |
1.080 |
1.080 |
CDF |
HDF |
1.080 |
1.081 |
CCE |
HCE |
1.080 |
1.080 |
CCF |
HCF |
1.080 |
1.080 |
CCC |
HCC |
1.080 |
1.079 |
CCB |
HCB |
1.080 |
1.080 |
CAA |
HAA |
1.100 |
1.090 |
CAA |
HAAA |
1.100 |
1.090 |
CAF |
HAF |
1.080 |
1.081 |
CAE |
HAE |
1.080 |
1.080 |
CAC |
HAC |
1.080 |
1.080 |
Bond Angles for PB2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CDC |
CDB |
CDA |
118.8 |
119.9 |
CDB |
CDC |
CDD |
120.2 |
120.1 |
CDC |
CDB |
HDB |
120.6 |
120.1 |
CDB |
CDC |
HDC |
119.9 |
119.9 |
CDB |
CDA |
CDF |
119.6 |
119.7 |
CDB |
CDA |
CCD |
119.7 |
120.2 |
CDA |
CDB |
HDB |
120.6 |
120.0 |
CDC |
CDD |
CDE |
121.7 |
120.3 |
CDD |
CDC |
HDC |
119.9 |
120.0 |
CDC |
CDD |
HDD |
119.2 |
119.9 |
CDD |
CDE |
CDF |
116.9 |
120.1 |
CDE |
CDD |
HDD |
119.1 |
119.8 |
CDD |
CDE |
HDE |
121.5 |
120.0 |
CDE |
CDF |
CDA |
122.7 |
119.9 |
CDF |
CDE |
HDE |
121.5 |
120.0 |
CDE |
CDF |
HDF |
118.6 |
120.1 |
CDF |
CDA |
CCD |
120.5 |
120.1 |
CDA |
CDF |
HDF |
118.7 |
120.0 |
CDA |
CCD |
CCE |
121.6 |
120.2 |
CDA |
CCD |
CCC |
116.7 |
120.1 |
CCE |
CCD |
CCC |
120.5 |
119.7 |
CCD |
CCE |
CCF |
122.6 |
119.9 |
CCD |
CCE |
HCE |
118.7 |
120.0 |
CCD |
CCC |
CCB |
118.0 |
119.9 |
CCD |
CCC |
HCC |
121.0 |
120.1 |
CCE |
CCF |
CCA |
116.3 |
120.1 |
CCF |
CCE |
HCE |
118.7 |
120.1 |
CCE |
CCF |
HCF |
121.9 |
119.9 |
CCF |
CCA |
CCB |
121.1 |
120.3 |
CCF |
CCA |
CAA |
118.6 |
119.8 |
CCA |
CCF |
HCF |
121.9 |
120.0 |
CCC |
CCB |
CCA |
121.0 |
120.1 |
CCB |
CCC |
HCC |
121.0 |
120.1 |
CCC |
CCB |
HCB |
119.5 |
120.0 |
CCB |
CCA |
CAA |
120.3 |
119.9 |
CCA |
CCB |
HCB |
119.5 |
119.9 |
CCA |
CAA |
NAB |
112.3 |
109.4 |
CCA |
CAA |
HAA |
108.5 |
109.4 |
CCA |
CAA |
HAAA |
107.9 |
109.5 |
CAA |
NAB |
CAF |
127.7 |
126.4 |
CAA |
NAB |
CAC |
123.9 |
126.4 |
NAB |
CAA |
HAA |
108.6 |
109.5 |
NAB |
CAA |
HAAA |
107.9 |
109.5 |
CAF |
NAB |
CAC |
108.4 |
107.2 |
NAB |
CAF |
CAE |
106.0 |
106.9 |
NAB |
CAF |
HAF |
127.0 |
126.6 |
NAB |
CAC |
NAD |
108.8 |
108.7 |
NAB |
CAC |
HAC |
125.6 |
125.6 |
CAF |
CAE |
NAD |
110.2 |
108.0 |
CAE |
CAF |
HAF |
127.0 |
126.6 |
CAF |
CAE |
HAE |
124.9 |
126.0 |
CAE |
NAD |
CAC |
106.6 |
109.2 |
NAD |
CAE |
HAE |
124.9 |
126.0 |
NAD |
CAC |
HAC |
125.6 |
125.7 |
HAA |
CAA |
HAAA |
111.7 |
109.5 |
Torsion Angles for PB2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CDC |
CDB |
CDA |
CDF |
357.4 |
0.0 |
CDC |
CDB |
CDA |
CCD |
182.0 |
180.0 |
CDA |
CDB |
CDC |
HDB |
180.0 |
180.2 |
CDB |
CDC |
CDD |
CDE |
357.8 |
0.1 |
CDD |
CDC |
CDB |
HDC |
180.0 |
180.0 |
CDB |
CDC |
CDD |
HDD |
177.8 |
180.0 |
CDA |
CDB |
CDC |
CDD |
2.7 |
360.0 |
CDC |
CDB |
CDA |
HDB |
180.0 |
179.8 |
CDA |
CDB |
CDC |
HDC |
182.6 |
180.0 |
CDE |
CDF |
CDA |
CDB |
2.0 |
0.0 |
CDF |
CDA |
CDB |
CCD |
175.4 |
180.0 |
CDB |
CDA |
CDF |
HDF |
182.0 |
180.1 |
CDB |
CDA |
CCD |
CCE |
234.7 |
180.0 |
CDB |
CDA |
CCD |
CCC |
42.3 |
359.7 |
CDD |
CDC |
CDB |
CDA |
2.7 |
360.0 |
CDD |
CDC |
CDB |
HDB |
182.7 |
179.8 |
CDB |
CDC |
CDD |
HDC |
180.0 |
180.0 |
CDC |
CDD |
CDE |
CDF |
1.5 |
359.9 |
CDE |
CDD |
CDC |
HDD |
180.0 |
180.1 |
CDC |
CDD |
CDE |
HDE |
181.5 |
180.0 |
CDE |
CDD |
CDC |
HDC |
177.8 |
180.1 |
CDC |
CDD |
CDE |
HDD |
180.0 |
179.9 |
CDD |
CDE |
CDF |
CDA |
358.5 |
0.0 |
CDF |
CDE |
CDD |
HDE |
180.0 |
179.9 |
CDD |
CDE |
CDF |
HDF |
178.5 |
180.0 |
CDB |
CDA |
CDF |
CDE |
2.0 |
0.0 |
CDF |
CDE |
CDD |
HDD |
181.5 |
180.0 |
CDD |
CDE |
CDF |
HDE |
180.0 |
180.1 |
CDE |
CDF |
CDA |
CCD |
177.4 |
180.0 |
CDA |
CDF |
CDE |
HDF |
180.0 |
180.1 |
CDB |
CDA |
CDF |
CCD |
184.7 |
180.0 |
CDF |
CDA |
CDB |
HDB |
177.4 |
180.2 |
CDA |
CDF |
CDE |
HDE |
178.5 |
180.0 |
CDE |
CDF |
CDA |
HDF |
180.0 |
179.9 |
CDF |
CDA |
CCD |
CCE |
59.4 |
0.0 |
CDF |
CDA |
CCD |
CCC |
226.9 |
179.8 |
CDB |
CDA |
CCD |
CDF |
175.3 |
180.0 |
CCD |
CDA |
CDB |
HDB |
2.0 |
0.2 |
CCD |
CDA |
CDF |
HDF |
357.4 |
0.0 |
CCE |
CCD |
CDA |
CCC |
192.4 |
180.3 |
CDA |
CCD |
CCE |
CCF |
175.7 |
180.0 |
CDA |
CCD |
CCE |
HCE |
355.8 |
360.0 |
CDA |
CCD |
CCC |
CCB |
183.7 |
180.0 |
CDA |
CCD |
CCC |
HCC |
3.7 |
360.0 |
CDA |
CCD |
CCE |
CCC |
167.1 |
179.7 |
CCE |
CCD |
CCC |
CCB |
351.4 |
359.8 |
CCE |
CCD |
CCC |
HCC |
171.4 |
179.7 |
CCD |
CCE |
CCF |
CCA |
356.7 |
0.0 |
CCF |
CCE |
CCD |
HCE |
180.0 |
180.0 |
CCD |
CCE |
CCF |
HCF |
176.7 |
180.0 |
CDA |
CCD |
CCC |
CCE |
192.3 |
180.3 |
CCC |
CCD |
CCE |
CCF |
8.7 |
0.2 |
CCC |
CCD |
CCE |
HCE |
188.7 |
180.2 |
CCD |
CCC |
CCB |
CCA |
3.4 |
360.0 |
CCB |
CCC |
CCD |
HCC |
180.0 |
180.0 |
CCD |
CCC |
CCB |
HCB |
183.4 |
180.0 |
CCF |
CCE |
CCD |
CCC |
8.7 |
0.2 |
CCD |
CCE |
CCF |
HCE |
180.0 |
180.0 |
CCE |
CCF |
CCA |
CCB |
358.0 |
359.7 |
CCE |
CCF |
CCA |
CAA |
176.7 |
179.9 |
CCA |
CCF |
CCE |
HCF |
180.0 |
180.0 |
CCA |
CCF |
CCE |
HCE |
176.7 |
180.1 |
CCE |
CCF |
CCA |
HCF |
180.0 |
180.0 |
CCC |
CCB |
CCA |
CCF |
1.8 |
0.3 |
CCB |
CCA |
CCF |
CAA |
181.3 |
179.7 |
CCF |
CCA |
CCB |
HCB |
181.8 |
180.3 |
CCF |
CCA |
CAA |
NAB |
239.8 |
90.0 |
CCF |
CCA |
CAA |
HAA |
359.8 |
210.0 |
CCF |
CCA |
CAA |
HAAA |
121.0 |
330.0 |
CCD |
CCC |
CCB |
HCC |
180.0 |
180.0 |
CCF |
CCA |
CCB |
CCC |
1.8 |
0.3 |
CCC |
CCB |
CCA |
CAA |
183.1 |
180.1 |
CCA |
CCB |
CCC |
HCB |
180.0 |
180.0 |
CCF |
CCA |
CCB |
CAA |
178.7 |
180.3 |
CCB |
CCA |
CCF |
HCF |
178.0 |
179.7 |
CCA |
CCB |
CCC |
HCC |
183.4 |
180.0 |
CCC |
CCB |
CCA |
HCB |
180.0 |
180.0 |
CCB |
CCA |
CAA |
NAB |
58.5 |
270.3 |
CCB |
CCA |
CAA |
HAA |
178.5 |
30.2 |
CCB |
CCA |
CAA |
HAAA |
299.7 |
150.3 |
CCF |
CCA |
CAA |
CCB |
181.3 |
179.7 |
CAA |
CCA |
CCF |
HCF |
356.7 |
360.0 |
CAA |
CCA |
CCB |
HCB |
3.1 |
0.0 |
CCA |
CAA |
NAB |
CAF |
62.3 |
90.0 |
CCA |
CAA |
NAB |
CAC |
241.9 |
269.6 |
NAB |
CAA |
CCA |
HAA |
240.0 |
240.0 |
NAB |
CAA |
CCA |
HAAA |
118.8 |
120.0 |
HAA |
CAA |
CCA |
HAAA |
238.8 |
240.0 |
CCA |
CAA |
NAB |
HAA |
120.0 |
119.9 |
CCA |
CAA |
NAB |
HAAA |
241.2 |
240.0 |
CAF |
NAB |
CAA |
CAC |
180.5 |
180.4 |
CAA |
NAB |
CAF |
CAE |
178.2 |
180.0 |
CAA |
NAB |
CAF |
HAF |
358.2 |
360.0 |
CAA |
NAB |
CAC |
NAD |
182.1 |
179.8 |
CAA |
NAB |
CAC |
HAC |
2.1 |
0.1 |
HAA |
CAA |
NAB |
HAAA |
121.2 |
120.0 |
CAA |
NAB |
CAF |
CAC |
179.6 |
179.7 |
CAF |
NAB |
CAA |
HAA |
302.3 |
330.0 |
CAF |
NAB |
CAA |
HAAA |
181.1 |
210.0 |
CAF |
NAB |
CAC |
NAD |
1.7 |
359.5 |
CAF |
NAB |
CAC |
HAC |
181.7 |
179.8 |
NAB |
CAF |
CAE |
NAD |
0.7 |
0.0 |
CAE |
CAF |
NAB |
HAF |
180.0 |
180.0 |
NAB |
CAF |
CAE |
HAE |
180.7 |
180.0 |
CAA |
NAB |
CAC |
CAF |
180.4 |
180.3 |
CAC |
NAB |
CAA |
HAA |
121.8 |
149.7 |
CAC |
NAB |
CAA |
HAAA |
0.6 |
29.6 |
CAC |
NAB |
CAF |
CAE |
358.6 |
0.3 |
CAC |
NAB |
CAF |
HAF |
178.6 |
180.3 |
CAE |
NAD |
CAC |
NAB |
358.8 |
0.5 |
NAD |
CAC |
NAB |
HAC |
180.0 |
179.8 |
CAE |
CAF |
NAB |
CAC |
358.6 |
0.3 |
NAB |
CAF |
CAE |
HAF |
180.0 |
180.0 |
CAF |
CAE |
NAD |
CAC |
0.4 |
359.7 |
NAD |
CAE |
CAF |
HAE |
180.0 |
180.0 |
NAB |
CAC |
NAD |
CAE |
358.8 |
0.5 |
NAD |
CAE |
CAF |
HAF |
180.7 |
180.0 |
CAF |
CAE |
NAD |
HAE |
180.0 |
180.0 |
CAE |
NAD |
CAC |
HAC |
178.8 |
180.3 |
NAB |
CAC |
NAD |
HAC |
180.0 |
180.2 |
CAC |
NAD |
CAE |
HAE |
180.4 |
179.7 |
CDC |
CDB |
HDB |
CDA |
180.0 |
180.2 |
HDB |
CDB |
CDC |
CDD |
182.7 |
179.8 |
HDB |
CDB |
CDC |
HDC |
2.7 |
359.8 |
HDB |
CDB |
CDA |
CDF |
177.4 |
180.2 |
HDB |
CDB |
CDA |
CCD |
2.0 |
0.2 |
HDC |
CDC |
CDB |
CDA |
182.6 |
180.0 |
CDB |
CDC |
HDC |
CDD |
180.0 |
180.0 |
HDC |
CDC |
CDB |
HDB |
2.7 |
359.8 |
HDC |
CDC |
CDD |
CDE |
177.8 |
180.1 |
HDC |
CDC |
CDD |
HDD |
357.8 |
360.0 |
CDC |
CDD |
HDD |
CDE |
180.0 |
180.1 |
HDD |
CDD |
CDC |
HDC |
357.8 |
360.0 |
HDD |
CDD |
CDE |
CDF |
181.5 |
180.0 |
HDD |
CDD |
CDE |
HDE |
1.5 |
0.1 |
CDD |
CDE |
HDE |
CDF |
180.0 |
179.9 |
HDE |
CDE |
CDD |
HDD |
1.5 |
0.1 |
HDE |
CDE |
CDF |
CDA |
178.5 |
180.0 |
HDE |
CDE |
CDF |
HDF |
358.5 |
359.9 |
CDE |
CDF |
HDF |
CDA |
180.0 |
180.1 |
HDF |
CDF |
CDE |
HDE |
358.5 |
359.9 |
HDF |
CDF |
CDA |
CCD |
357.4 |
0.0 |
HCE |
CCE |
CCD |
CCC |
188.7 |
180.2 |
CCD |
CCE |
HCE |
CCF |
180.0 |
180.0 |
HCE |
CCE |
CCF |
CCA |
176.7 |
180.1 |
HCE |
CCE |
CCF |
HCF |
356.7 |
0.0 |
CCE |
CCF |
HCF |
CCA |
180.0 |
180.0 |
HCF |
CCF |
CCE |
HCE |
356.7 |
0.0 |
HCF |
CCF |
CCA |
CCB |
178.0 |
179.7 |
HCF |
CCF |
CCA |
CAA |
356.7 |
360.0 |
CCD |
CCC |
HCC |
CCB |
180.0 |
180.0 |
HCC |
CCC |
CCB |
CCA |
183.4 |
180.0 |
HCC |
CCC |
CCB |
HCB |
3.4 |
0.0 |
CCC |
CCB |
HCB |
CCA |
180.0 |
180.0 |
HCB |
CCB |
CCC |
HCC |
3.4 |
0.0 |
HCB |
CCB |
CCA |
CAA |
3.1 |
0.0 |
CCA |
CAA |
HAA |
NAB |
237.6 |
240.1 |
CCA |
CAA |
HAA |
HAAA |
118.8 |
120.1 |
HAA |
CAA |
NAB |
CAF |
302.3 |
330.0 |
HAA |
CAA |
NAB |
CAC |
121.8 |
149.7 |
NAB |
CAA |
HAA |
HAAA |
241.2 |
240.0 |
CCA |
CAA |
HAAA |
NAB |
121.6 |
120.0 |
CCA |
CAA |
HAAA |
HAA |
240.8 |
240.0 |
HAAA |
CAA |
NAB |
CAF |
181.1 |
210.0 |
HAAA |
CAA |
NAB |
CAC |
0.6 |
29.6 |
NAB |
CAA |
HAAA |
HAA |
119.2 |
120.0 |
HAF |
CAF |
NAB |
CAC |
178.6 |
180.3 |
NAB |
CAF |
HAF |
CAE |
180.0 |
180.0 |
HAF |
CAF |
CAE |
NAD |
180.7 |
180.0 |
HAF |
CAF |
CAE |
HAE |
0.7 |
360.0 |
CAF |
CAE |
HAE |
NAD |
180.0 |
180.0 |
HAE |
CAE |
CAF |
HAF |
0.7 |
360.0 |
HAE |
CAE |
NAD |
CAC |
180.4 |
179.7 |
NAB |
CAC |
HAC |
NAD |
180.0 |
179.7 |