PDB Chemical Component PAP

Ideal Model

Chemical Description

Name 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE
Formula C10 H16 N5 O13 P3
Formal charge 0
Molecular weight 507.181 g/mol
Component type NON-POLYMER

Chemical features

Atom count 47
Chiral atom count 5
Chiral atoms PA C4' C3' C2' C1'
Bond count 49
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) adenosine 3'-(dihydrogen phosphate) 5'-(trihydrogen diphosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxy-oxolan-2-yl]methyl phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@H]3O
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]3O
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)OP(=O)(O)O)OP(=O)(O)O)O)N
InChI descriptor InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7(27-29(17,18)19)4(26-10)1-25-31(23,24)28-30(20,21)22/h2-4,6-7,10,16H,1H2,(H,23,24)(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)/t4-,6-,7-,10-/m1/s1
InChIKey descriptor GBBWIZKLHXYJOA-KQYNXXCUSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1AFK
Processing site RCSB