PDB Chemical Component PAI

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PAI

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
P1	O1P	1.644	1.498
P1	O2P	1.616	1.612
P1	O3P	1.720	1.644
P1	O4P	1.623	1.612
O2P	HO2P	0.950	0.981
O3P	C6	1.516	1.404
C6	C5	1.622	1.530
C6	HC61	1.114	1.094
C6	HC62	1.115	1.096
C5	O1	1.438	1.433
C5	C4	1.613	1.542
C5	HC5	1.116	1.097
O1	HO1	0.950	0.967
C4	O4	1.446	1.432
C4	C3	1.670	1.541
C4	HC4	1.114	1.096
O4	HO4	0.950	0.967
C3	O3	1.459	1.434
C3	C2	1.619	1.542
C3	HC3	1.115	1.095
O3	HO3	0.950	0.968
C2	O2	1.417	1.434
C2	C1	1.589	1.533
C2	HC2	1.115	1.097
O2	HO2	0.949	0.968
C1	N1	1.506	1.460
C1	HC11	1.114	1.095
C1	HC12	1.115	1.096
N1	C7	1.529	1.466
N1	C9	1.524	1.465
C7	C8	1.556	1.526
C7	HC71	1.115	1.096
C7	HC72	1.114	1.096
C8	O5	1.290	1.423
C8	O6	1.245	1.422
C8	HC8	1.115	1.097
O5	HO5	0.951	0.972
O6	HO6	0.951	0.972
C9	P2	1.775	1.785
C9	HC91	1.115	1.096
C9	HC92	1.115	1.096
P2	O5P	1.618	1.500
P2	O6P	1.622	1.618
P2	O7P	1.595	1.619
O6P	HO6P	0.949	0.980
O7P	HO7P	0.949	0.981
HO7	O4P	0.950	0.981

Bond Angles for PAI

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1P	P1	O2P	108.2	117.1
O1P	P1	O3P	111.9	106.0
O1P	P1	O4P	108.2	118.0
O2P	P1	O3P	110.2	103.6
O2P	P1	O4P	109.0	105.2
P1	O2P	HO2P	108.2	119.1
O3P	P1	O4P	109.2	105.4
P1	O3P	C6	125.1	115.6
O3P	C6	C5	118.9	111.9
O3P	C6	HC61	108.8	108.1
O3P	C6	HC62	108.8	107.5
C5	C6	HC61	108.8	110.9
C5	C6	HC62	108.8	110.3
C6	C5	O1	106.1	108.7
C6	C5	C4	116.6	115.9
C6	C5	HC5	106.7	108.6
HC61	C6	HC62	101.3	108.1
O1	C5	C4	108.6	108.9
O1	C5	HC5	115.1	104.8
C5	O1	HO1	106.0	106.1
C4	C5	HC5	104.1	109.4
C5	C4	O4	104.2	107.9
C5	C4	C3	120.4	115.0
C5	C4	HC4	105.0	109.2
O4	C4	C3	106.8	108.0
O4	C4	HC4	119.1	106.3
C4	O4	HO4	104.2	106.2
C3	C4	HC4	102.4	110.0
C4	C3	O3	103.2	109.3
C4	C3	C2	118.0	114.2
C4	C3	HC3	106.4	110.8
O3	C3	C2	103.4	106.5
O3	C3	HC3	120.4	106.5
C3	O3	HO3	103.2	106.0
C2	C3	HC3	106.3	109.2
C3	C2	O2	111.7	108.8
C3	C2	C1	118.6	115.8
C3	C2	HC2	99.6	109.8
O2	C2	C1	103.7	107.6
O2	C2	HC2	115.6	105.8
C2	O2	HO2	111.6	106.1
C1	C2	HC2	108.2	108.6
C2	C1	N1	120.1	112.4
C2	C1	HC11	108.5	110.4
C2	C1	HC12	108.4	109.4
N1	C1	HC11	108.4	109.0
N1	C1	HC12	108.4	108.1
C1	N1	C7	116.9	109.5
C1	N1	C9	111.7	111.7
HC11	C1	HC12	101.6	107.4
C7	N1	C9	111.0	110.1
N1	C7	C8	115.6	111.1
N1	C7	HC71	110.0	108.9
N1	C7	HC72	110.0	109.5
N1	C9	P2	113.3	103.8
N1	C9	HC91	110.8	113.3
N1	C9	HC92	110.8	112.0
C8	C7	HC71	109.9	110.0
C8	C7	HC72	110.0	110.2
C7	C8	O5	120.5	107.7
C7	C8	O6	117.6	109.0
C7	C8	HC8	123.7	110.9
HC71	C7	HC72	100.2	107.1
O5	C8	O6	121.9	110.4
O5	C8	HC8	48.6	109.0
C8	O5	HO5	120.5	107.0
O6	C8	HC8	99.1	109.8
C8	O6	HO6	117.6	107.0
P2	C9	HC91	110.8	112.7
P2	C9	HC92	110.8	107.2
C9	P2	O5P	104.2	116.6
C9	P2	O6P	114.7	104.2
C9	P2	O7P	107.1	102.5
HC91	C9	HC92	99.5	107.8
O5P	P2	O6P	109.6	115.1
O5P	P2	O7P	111.2	114.1
O6P	P2	O7P	109.9	102.7
P2	O6P	HO6P	114.7	118.9
P2	O7P	HO7P	107.1	118.9

Torsion Angles for PAI

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2P	P1	O1P	O3P	238.4	115.0
O2P	P1	O1P	O4P	118.0	232.7
O1P	P1	O2P	HO2P	180.0	57.5
O3P	P1	O1P	O4P	239.6	117.7
O1P	P1	O3P	C6	60.2	300.0
O1P	P1	O2P	O3P	122.6	243.7
O1P	P1	O2P	O4P	242.5	133.3
O3P	P1	O2P	O4P	119.8	249.6
O2P	P1	O3P	C6	180.7	176.2
O1P	P1	O3P	O2P	239.6	123.9
O1P	P1	O3P	O4P	119.8	234.2
O2P	P1	O3P	O4P	240.3	110.3
O3P	P1	O2P	HO2P	57.3	173.8
P1	O3P	C6	C5	191.0	180.0
P1	O3P	C6	HC61	316.2	302.4
P1	O3P	C6	HC62	65.7	58.8
O1P	P1	O4P	O2P	117.5	227.2
O1P	P1	O4P	O3P	237.9	118.0
O2P	P1	O4P	O3P	120.4	250.8
O4P	P1	O2P	HO2P	297.5	284.2
O4P	P1	O3P	C6	300.4	65.8
HO2P	O2P	P1	O3P	57.3	173.8
HO2P	O2P	P1	O4P	297.5	284.2
C6	O3P	P1	O4P	300.4	65.8
C5	C6	O3P	HC61	234.8	237.6
C5	C6	O3P	HC62	125.2	121.2
O3P	C6	C5	O1	188.2	297.8
O3P	C6	C5	C4	309.2	60.8
O3P	C6	C5	HC5	65.0	184.3
HC61	C6	O3P	HC62	250.5	243.6
O3P	C6	C5	HC61	125.2	120.7
O3P	C6	C5	HC62	234.8	240.4
HC61	C6	C5	HC62	109.5	119.7
O1	C5	C6	C4	239.0	237.0
O1	C5	C6	HC5	123.2	113.5
C6	C5	O1	HO1	180.0	202.3
C4	C5	C6	HC5	244.2	236.5
C6	C5	C4	O4	60.5	55.1
C6	C5	C4	C3	180.0	175.7
C6	C5	C4	HC4	294.5	300.0
O3P	C6	HC61	C5	229.1	237.0
O3P	C6	HC61	HC62	114.5	116.0
C5	C6	HC61	HC62	245.5	239.0
HC61	C6	C5	O1	63.0	177.1
HC61	C6	C5	C4	184.0	300.0
HC61	C6	C5	HC5	299.8	63.6
O3P	C6	HC62	C5	130.9	122.2
O3P	C6	HC62	HC61	245.5	243.6
C5	C6	HC62	HC61	114.6	121.4
HC62	C6	C5	O1	313.4	57.4
HC62	C6	C5	C4	74.4	180.3
HC62	C6	C5	HC5	190.2	303.9
O1	C5	C6	HC61	63.0	177.1
O1	C5	C6	HC62	313.4	57.4
C6	C5	O1	C4	126.0	127.1
C6	C5	O1	HC5	242.2	244.1
C4	C5	O1	HC5	116.2	117.0
O1	C5	C4	O4	180.1	177.9
O1	C5	C4	C3	299.7	298.6
O1	C5	C4	HC4	54.2	62.8
C4	C5	C6	HC61	184.0	300.0
C4	C5	C6	HC62	74.4	180.3
C6	C5	C4	O1	240.4	237.1
C6	C5	C4	HC5	117.3	123.1
O1	C5	C4	HC5	236.9	245.9
C4	C5	O1	HO1	54.0	75.3
O4	C4	C5	C3	240.4	239.4
O4	C4	C5	HC4	125.9	115.1
C5	C4	O4	HO4	180.0	190.3
C3	C4	C5	HC4	245.5	235.8
C5	C4	C3	O3	202.7	303.0
C5	C4	C3	C2	89.5	183.9
C5	C4	C3	HC3	330.3	60.1
HC5	C5	C6	HC61	299.8	63.6
HC5	C5	C6	HC62	190.2	303.9
C6	C5	HC5	O1	117.4	116.0
C6	C5	HC5	C4	236.1	232.7
O1	C5	HC5	C4	118.7	116.7
HC5	C5	O1	HO1	297.8	318.3
HC5	C5	C4	O4	303.2	292.0
HC5	C5	C4	C3	62.8	52.6
HC5	C5	C4	HC4	177.2	176.9
HO1	O1	C5	C4	54.0	75.3
HO1	O1	C5	HC5	297.8	318.3
O4	C4	C5	HC5	303.2	292.0
C5	C4	O4	C3	128.4	124.9
C5	C4	O4	HC4	243.5	242.9
C3	C4	O4	HC4	115.1	118.0
O4	C4	C3	O3	321.0	63.6
O4	C4	C3	C2	207.8	304.5
O4	C4	C3	HC3	88.6	180.7
C3	C4	C5	HC5	62.8	52.6
C5	C4	C3	O4	241.7	239.4
C5	C4	C3	HC4	115.8	123.8
O4	C4	C3	HC4	234.1	244.4
C3	C4	O4	HO4	51.5	65.4
O3	C3	C4	C2	113.2	119.1
O3	C3	C4	HC3	232.4	242.9
C4	C3	O3	HO3	179.9	222.0
C2	C3	C4	HC3	119.2	123.8
C4	C3	C2	O2	291.3	56.6
C4	C3	C2	C1	170.8	295.3
C4	C3	C2	HC2	53.9	171.9
HC4	C4	C5	HC5	177.2	176.9
C5	C4	HC4	O4	116.1	116.1
C5	C4	HC4	C3	233.5	232.9
O4	C4	HC4	C3	117.4	116.7
HC4	C4	O4	HO4	296.5	307.4
HC4	C4	C3	O3	86.8	179.2
HC4	C4	C3	C2	333.6	60.1
HC4	C4	C3	HC3	214.4	296.3
HO4	O4	C4	C3	51.5	65.4
HO4	O4	C4	HC4	296.5	307.4
O3	C3	C4	HC4	86.8	179.2
C4	C3	O3	C2	236.5	236.2
C4	C3	O3	HC3	118.3	119.8
C2	C3	O3	HC3	241.7	243.6
O3	C3	C2	O2	178.2	295.8
O3	C3	C2	C1	57.8	174.5
O3	C3	C2	HC2	300.9	51.1
C2	C3	C4	HC4	333.6	60.1
C4	C3	C2	O3	113.1	120.7
C4	C3	C2	HC3	240.7	235.3
O3	C3	C2	HC3	127.6	114.6
C2	C3	O3	HO3	303.4	345.9
O2	C2	C3	C1	120.5	121.3
O2	C2	C3	HC2	237.4	244.7
C3	C2	O2	HO2	180.0	64.7
C1	C2	C3	HC2	116.9	123.4
C3	C2	C1	N1	48.0	302.0
C3	C2	C1	HC11	173.3	180.0
C3	C2	C1	HC12	282.8	62.1
HC3	C3	C4	HC4	214.4	296.3
C4	C3	HC3	O3	243.4	241.2
C4	C3	HC3	C2	126.6	126.6
O3	C3	HC3	C2	243.2	245.4
HC3	C3	O3	HO3	61.7	102.2
HC3	C3	C2	O2	50.6	181.3
HC3	C3	C2	C1	290.1	60.0
HC3	C3	C2	HC2	173.2	296.6
HO3	O3	C3	C2	303.4	345.9
HO3	O3	C3	HC3	61.7	102.2
O2	C2	C3	HC3	50.6	181.3
C3	C2	O2	C1	231.1	233.9
C3	C2	O2	HC2	112.9	117.9
C1	C2	O2	HC2	241.8	244.1
O2	C2	C1	N1	283.6	180.1
O2	C2	C1	HC11	48.8	58.1
O2	C2	C1	HC12	158.3	300.2
C1	C2	C3	HC3	290.1	60.0
C3	C2	C1	O2	124.5	121.9
C3	C2	C1	HC2	247.8	235.9
O2	C2	C1	HC2	123.3	114.0
C1	C2	O2	HO2	308.9	190.8
N1	C1	C2	HC11	234.7	122.0
N1	C1	C2	HC12	125.2	239.9
C2	C1	N1	C7	206.8	297.3
C2	C1	N1	C9	77.5	175.0
HC11	C1	C2	HC12	250.5	118.0
HC2	C2	C3	HC3	173.2	296.6
C3	C2	HC2	O2	240.2	242.8
C3	C2	HC2	C1	124.5	127.5
O2	C2	HC2	C1	244.3	244.7
HC2	C2	O2	HO2	67.1	306.8
HC2	C2	C1	N1	160.3	66.0
HC2	C2	C1	HC11	285.5	304.1
HC2	C2	C1	HC12	35.1	186.1
HO2	O2	C2	C1	308.9	190.8
HO2	O2	C2	HC2	67.1	306.8
N1	C1	C2	HC2	160.3	66.0
C2	C1	N1	HC11	125.3	237.3
C2	C1	N1	HC12	234.8	120.8
HC11	C1	N1	HC12	109.5	243.5
C7	N1	C1	C9	129.3	122.3
C1	N1	C7	C8	90.0	178.7
C1	N1	C7	HC71	215.2	300.0
C1	N1	C7	HC72	324.7	56.7
C1	N1	C9	P2	74.9	297.5
C1	N1	C9	HC91	200.2	60.1
C1	N1	C9	HC92	309.6	182.2
HC11	C1	C2	HC2	285.5	304.1
C2	C1	HC11	N1	228.1	123.9
C2	C1	HC11	HC12	114.1	240.9
N1	C1	HC11	HC12	246.0	116.9
HC11	C1	N1	C7	81.5	60.0
HC11	C1	N1	C9	312.2	297.7
HC12	C1	C2	HC2	35.1	186.1
C2	C1	HC12	N1	131.8	237.3
C2	C1	HC12	HC11	245.9	119.8
N1	C1	HC12	HC11	114.0	242.5
HC12	C1	N1	C7	332.1	176.5
HC12	C1	N1	C9	202.7	54.2
C7	N1	C1	HC11	81.5	60.0
C7	N1	C1	HC12	332.1	176.5
C1	N1	C7	C9	230.4	236.8
C7	N1	C9	P2	302.6	175.6
C7	N1	C9	HC91	67.9	298.1
C7	N1	C9	HC92	177.3	60.3
C8	C7	N1	HC71	234.8	238.7
C8	C7	N1	HC72	125.3	121.9
N1	C7	C8	O5	63.3	300.7
N1	C7	C8	O6	240.9	181.0
N1	C7	C8	HC8	5.3	60.0
HC71	C7	N1	HC72	250.5	243.2
C9	N1	C1	HC11	312.2	297.7
C9	N1	C1	HC12	202.7	54.2
C1	N1	C9	C7	132.3	121.9
C9	N1	C7	C8	219.6	301.9
C9	N1	C7	HC71	344.8	63.2
C9	N1	C7	HC72	94.3	180.0
P2	C9	N1	HC91	234.7	237.5
P2	C9	N1	HC92	125.3	115.3
N1	C9	P2	O5P	91.0	60.0
N1	C9	P2	O6P	210.8	292.1
N1	C9	P2	O7P	333.0	185.4
HC91	C9	N1	HC92	250.6	237.9
C8	C7	N1	C9	219.6	301.9
N1	C7	C8	HC71	125.2	120.6
N1	C7	C8	HC72	234.7	238.4
HC71	C7	C8	HC72	109.5	117.8
O5	C8	C7	O6	182.4	119.8
O5	C8	C7	HC8	58.0	240.8
C7	C8	O5	HO5	180.0	156.7
O6	C8	C7	HC8	235.6	121.0
C7	C8	O6	HO6	180.0	202.7
HC71	C7	N1	C9	344.8	63.2
N1	C7	HC71	C8	231.6	238.0
N1	C7	HC71	HC72	115.8	118.3
C8	C7	HC71	HC72	244.2	240.3
HC71	C7	C8	O5	298.1	180.1
HC71	C7	C8	O6	115.7	60.3
HC71	C7	C8	HC8	240.1	299.3
HC72	C7	N1	C9	94.3	180.0
N1	C7	HC72	C8	128.4	122.5
N1	C7	HC72	HC71	244.2	242.1
C8	C7	HC72	HC71	115.7	119.6
HC72	C7	C8	O5	188.6	62.3
HC72	C7	C8	O6	6.2	302.5
HC72	C7	C8	HC8	130.6	181.5
O5	C8	C7	HC71	298.1	180.1
O5	C8	C7	HC72	188.6	62.3
C7	C8	O5	O6	177.5	241.1
C7	C8	O5	HC8	250.2	120.4
O6	C8	O5	HC8	72.7	239.3
O5	C8	O6	HO6	357.6	84.6
O6	C8	C7	HC71	115.7	60.3
O6	C8	C7	HC72	6.2	302.5
C7	C8	O6	O5	182.4	118.1
C7	C8	O6	HC8	135.9	238.4
O5	C8	O6	HC8	313.5	120.3
O6	C8	O5	HO5	2.5	275.6
HC8	C8	C7	HC71	240.1	299.3
HC8	C8	C7	HC72	130.6	181.5
C7	C8	HC8	O5	103.0	241.6
C7	C8	HC8	O6	227.8	120.5
O5	C8	HC8	O6	124.8	238.9
HC8	C8	O5	HO5	289.9	36.3
HC8	C8	O6	HO6	44.0	324.3
HO5	O5	C8	O6	2.5	275.6
HO5	O5	C8	HC8	289.9	36.3
HO6	O6	C8	HC8	44.0	324.3
N1	C9	P2	HC91	125.2	122.9
N1	C9	P2	HC92	234.7	241.4
HC91	C9	P2	HC92	109.5	118.4
O5P	P2	C9	O6P	240.2	128.0
O5P	P2	C9	O7P	117.9	234.7
O6P	P2	C9	O7P	237.7	106.7
C9	P2	O6P	HO6P	180.0	179.0
C9	P2	O7P	HO7P	180.0	182.3
N1	C9	HC91	P2	233.4	242.6
N1	C9	HC91	HC92	116.6	124.5
P2	C9	HC91	HC92	243.3	241.9
HC91	C9	P2	O5P	325.8	297.1
HC91	C9	P2	O6P	85.5	169.1
HC91	C9	P2	O7P	207.8	62.4
N1	C9	HC92	P2	126.7	113.2
N1	C9	HC92	HC91	243.4	234.8
P2	C9	HC92	HC91	116.7	121.6
HC92	C9	P2	O5P	216.3	178.7
HC92	C9	P2	O6P	336.1	50.7
HC92	C9	P2	O7P	98.3	304.0
O5P	P2	C9	HC91	325.8	297.1
O5P	P2	C9	HC92	216.3	178.7
C9	P2	O5P	O6P	123.2	237.6
C9	P2	O5P	O7P	244.9	119.3
O6P	P2	O5P	O7P	121.7	241.7
O5P	P2	O6P	HO6P	296.8	50.1
O5P	P2	O7P	HO7P	66.7	309.3
O6P	P2	C9	HC91	85.5	169.1
O6P	P2	C9	HC92	336.1	50.7
C9	P2	O6P	O5P	243.2	128.9
C9	P2	O6P	O7P	120.8	253.4
O5P	P2	O6P	O7P	237.5	124.5
O6P	P2	O7P	HO7P	305.2	74.5
O7P	P2	C9	HC91	207.8	62.4
O7P	P2	C9	HC92	98.3	304.0
C9	P2	O7P	O5P	113.3	233.0
C9	P2	O7P	O6P	234.8	107.8
O5P	P2	O7P	O6P	121.5	234.8
O7P	P2	O6P	HO6P	59.3	285.5
HO6P	O6P	P2	O7P	59.3	285.5