PDB Chemical Component PAF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PAF

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	C1	1.290	1.220
C1	O2	1.264	1.220
C1	C2	1.567	1.507
C2	O3	1.442	1.429
C2	C3	1.558	1.530
C2	H21	1.115	1.090
O3	HO31	0.950	0.967
C3	C4	1.548	1.531
C3	C5	1.533	1.530
C3	C6	1.518	1.530
C4	H41	1.115	1.090
C4	H42	1.114	1.090
C4	H43	1.115	1.090
C5	H51	1.115	1.091
C5	H52	1.116	1.090
C5	H53	1.115	1.091
C6	O4	1.415	1.429
C6	H61	1.115	1.089
C6	H62	1.115	1.090
O4	HO41	0.949	0.967

Bond Angles for PAF

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	O2	123.1	120.0
O1	C1	C2	117.7	120.0
O2	C1	C2	119.2	120.0
C1	C2	O3	108.5	109.5
C1	C2	C3	113.6	109.5
C1	C2	H21	107.2	109.5
O3	C2	C3	109.2	109.5
O3	C2	H21	111.8	109.4
C2	O3	HO31	108.5	106.8
C3	C2	H21	106.5	109.4
C2	C3	C4	110.8	109.4
C2	C3	C5	111.7	109.4
C2	C3	C6	104.1	109.5
C4	C3	C5	110.6	109.4
C4	C3	C6	109.9	109.5
C3	C4	H41	110.8	109.5
C3	C4	H42	111.7	109.4
C3	C4	H43	111.7	109.5
C5	C3	C6	109.5	109.5
C3	C5	H51	111.7	109.5
C3	C5	H52	111.4	109.5
C3	C5	H53	111.5	109.5
C3	C6	O4	109.6	109.4
C3	C6	H61	112.1	109.5
C3	C6	H62	112.1	109.4
H41	C4	H42	111.7	109.4
H41	C4	H43	111.7	109.5
H42	C4	H43	98.7	109.5
H51	C5	H52	111.3	109.5
H51	C5	H53	111.3	109.4
H52	C5	H53	98.9	109.5
O4	C6	H61	112.2	109.5
O4	C6	H62	112.2	109.4
C6	O4	HO41	109.5	106.8
H61	C6	H62	98.2	109.5

Torsion Angles for PAF

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	O1	C2	179.5	180.0
O1	C1	C2	O3	45.3	5.0
O1	C1	C2	C3	283.7	245.0
O1	C1	C2	H21	166.2	125.0
O1	C1	O2	C2	180.5	180.0
O2	C1	C2	O3	225.8	185.0
O2	C1	C2	C3	104.1	65.0
O2	C1	C2	H21	346.7	305.0
O1	C1	C2	O2	179.5	180.0
O3	C2	C1	C3	121.6	120.0
O3	C2	C1	H21	239.1	240.0
C1	C2	O3	HO31	180.0	299.9
C3	C2	C1	H21	117.4	120.0
C1	C2	C3	C4	301.3	60.0
C1	C2	C3	C5	65.1	300.0
C1	C2	C3	C6	183.2	180.0
C1	C2	O3	C3	235.7	239.9
C1	C2	O3	H21	118.1	120.0
C3	C2	O3	H21	242.4	240.1
O3	C2	C3	C4	180.0	299.9
O3	C2	C3	C5	303.8	180.0
O3	C2	C3	C6	61.9	59.9
C1	C2	C3	O3	121.3	120.0
C1	C2	C3	H21	242.2	240.0
O3	C2	C3	H21	120.9	119.9
C3	C2	O3	HO31	304.3	60.0
C4	C3	C2	C5	236.2	119.9
C4	C3	C2	C6	118.1	240.0
C2	C3	C4	H41	180.0	300.1
C2	C3	C4	H42	305.3	60.0
C2	C3	C4	H43	54.8	180.0
C5	C3	C2	C6	241.9	120.0
C2	C3	C5	H51	180.0	180.0
C2	C3	C5	H52	305.2	299.9
C2	C3	C5	H53	54.7	60.0
C2	C3	C6	O4	59.5	180.0
C2	C3	C6	H61	184.8	300.0
C2	C3	C6	H62	294.2	60.1
C1	C2	H21	O3	241.2	240.0
C1	C2	H21	C3	122.0	120.0
O3	C2	H21	C3	240.8	240.0
H21	C2	O3	HO31	62.0	180.0
H21	C2	C3	C4	59.1	180.0
H21	C2	C3	C5	182.9	60.1
H21	C2	C3	C6	301.0	300.0
HO31	O3	C2	C3	304.3	60.0
HO31	O3	C2	H21	62.0	180.0
C4	C3	C2	H21	59.1	180.0
C2	C3	C4	C5	124.4	240.1
C2	C3	C4	C6	245.5	120.0
C5	C3	C4	C6	121.1	240.0
C4	C3	C5	H51	303.9	60.0
C4	C3	C5	H52	69.2	180.0
C4	C3	C5	H53	178.6	300.0
C4	C3	C6	O4	300.8	300.0
C4	C3	C6	H61	66.1	60.0
C4	C3	C6	H62	175.5	180.1
H41	C4	C3	H42	234.7	240.1
H41	C4	C3	H43	125.2	120.1
H42	C4	C3	H43	250.5	240.0
C5	C3	C2	H21	182.9	60.1
C2	C3	C5	C4	236.1	119.9
C2	C3	C5	C6	114.8	239.9
C4	C3	C5	C6	238.7	120.0
C5	C3	C4	H41	55.5	60.0
C5	C3	C4	H42	180.9	180.0
C5	C3	C4	H43	290.3	299.9
C5	C3	C6	O4	179.1	60.0
C5	C3	C6	H61	304.4	180.0
C5	C3	C6	H62	53.8	300.0
H51	C5	C3	H52	234.8	240.0
H51	C5	C3	H53	125.3	120.0
H52	C5	C3	H53	250.5	240.0
C6	C3	C2	H21	301.0	300.0
C2	C3	C6	C4	118.7	240.0
C2	C3	C6	C5	240.4	120.0
C4	C3	C6	C5	121.7	240.0
C6	C3	C4	H41	294.5	180.0
C6	C3	C4	H42	59.8	300.0
C6	C3	C4	H43	169.3	60.0
C6	C3	C5	H51	65.2	300.0
C6	C3	C5	H52	190.5	60.0
C6	C3	C5	H53	299.9	180.0
O4	C6	C3	H61	234.7	240.0
O4	C6	C3	H62	125.3	119.9
C3	C6	O4	HO41	180.0	180.0
H61	C6	C3	H62	250.6	240.0
H41	C4	C3	C5	55.5	60.0
H41	C4	C3	C6	294.5	180.0
C3	C4	H41	H42	125.3	119.9
C3	C4	H41	H43	234.8	240.0
H42	C4	H41	H43	109.5	120.0
H42	C4	C3	C5	180.9	180.0
H42	C4	C3	C6	59.8	300.0
C3	C4	H42	H41	235.2	240.0
C3	C4	H42	H43	117.6	120.0
H41	C4	H42	H43	242.4	239.9
H43	C4	C3	C5	290.3	299.9
H43	C4	C3	C6	169.3	60.0
C3	C4	H43	H41	124.7	120.0
C3	C4	H43	H42	242.3	240.1
H41	C4	H43	H42	117.6	120.0
H51	C5	C3	C6	65.2	300.0
C3	C5	H51	H52	125.3	120.0
C3	C5	H51	H53	234.7	240.0
H52	C5	H51	H53	109.4	120.0
H52	C5	C3	C6	190.5	60.0
C3	C5	H52	H51	234.5	240.0
C3	C5	H52	H53	117.4	120.0
H51	C5	H52	H53	242.8	240.0
H53	C5	C3	C6	299.9	180.0
C3	C5	H53	H51	125.5	120.0
C3	C5	H53	H52	242.7	240.0
H51	C5	H53	H52	117.2	120.0
C3	C6	O4	H61	125.2	120.0
C3	C6	O4	H62	234.7	240.1
H61	C6	O4	H62	109.5	120.1
C3	C6	H61	O4	236.2	240.0
C3	C6	H61	H62	118.0	120.0
O4	C6	H61	H62	241.8	240.0
H61	C6	O4	HO41	54.8	60.0
C3	C6	H62	O4	123.9	119.9
C3	C6	H62	H61	242.0	240.0
O4	C6	H62	H61	118.1	120.1
H62	C6	O4	HO41	305.3	299.9
HO41	O4	C6	H61	54.8	60.0
HO41	O4	C6	H62	305.3	299.9