PDB Chemical Component PAC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PAC

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.507 1.506
C1 O1 1.285 1.208
C1 O2 1.237 1.342
C2 C1' 1.507 1.507
C2 H21 1.115 1.089
C2 H22 1.114 1.090
C1' C2' 1.390 1.381
C1' C6' 1.376 1.382
C2' C3' 1.371 1.382
C2' H2' 1.102 1.079
C3' C4' 1.367 1.382
C3' H3' 1.104 1.080
C4' C5' 1.381 1.381
C4' H4' 1.104 1.081
C5' C6' 1.372 1.383
C5' H5' 1.103 1.080
C6' H6' 1.102 1.080
O2 HO2 0.949 0.966

Bond Angles for PAC

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 109.2 120.0
C2 C1 O2 124.3 120.1
C1 C2 C1' 108.7 109.5
C1 C2 H21 112.5 109.5
C1 C2 H22 112.5 109.4
O1 C1 O2 126.4 119.9
C1 O2 HO2 124.3 120.1
C1' C2 H21 112.5 109.5
C1' C2 H22 112.5 109.5
C2 C1' C2' 124.0 120.0
C2 C1' C6' 113.5 119.9
H21 C2 H22 98.0 109.5
C2' C1' C6' 122.5 120.1
C1' C2' C3' 121.6 120.0
C1' C2' H2' 120.0 120.0
C1' C6' C5' 116.9 119.9
C1' C6' H6' 121.8 120.0
C3' C2' H2' 118.5 120.0
C2' C3' C4' 114.4 120.0
C2' C3' H3' 123.0 120.0
C4' C3' H3' 122.7 120.0
C3' C4' C5' 125.8 120.0
C3' C4' H4' 116.5 120.0
C5' C4' H4' 117.7 120.0
C4' C5' C6' 119.0 120.0
C4' C5' H5' 120.8 120.0
C6' C5' H5' 120.2 120.0
C5' C6' H6' 121.4 120.0

Torsion Angles for PAC

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O2 182.9 179.9
C2 C1 O2 HO2 180.0 180.1
C1' C2 C1 H21 234.7 240.0
C1' C2 C1 H22 125.2 120.0
C1 C2 C1' C2' 101.0 90.0
C1 C2 C1' C6' 282.7 269.8
H21 C2 C1 H22 250.5 240.0
C2 C1 O1 O2 177.0 180.1
O1 C1 C2 C1' 133.5 360.0
O1 C1 C2 H21 258.7 120.0
O1 C1 C2 H22 8.2 240.0
O1 C1 O2 HO2 356.5 0.2
C2 C1 O2 O1 183.5 179.9
O2 C1 C2 C1' 310.5 180.1
O2 C1 C2 H21 75.8 300.1
O2 C1 C2 H22 185.3 60.1
C1' C2 C1 O1 133.5 360.0
C1' C2 C1 O2 310.5 180.1
C1 C2 C1' H21 125.3 120.0
C1 C2 C1' H22 234.8 240.1
H21 C2 C1' H22 109.5 120.0
C2' C1' C2 C6' 178.3 180.3
C2 C1' C2' C3' 181.9 180.0
C2 C1' C2' H2' 1.9 360.0
C2 C1' C6' C5' 178.6 179.8
C2 C1' C6' H6' 358.6 0.2
H21 C2 C1 O1 258.7 120.0
H21 C2 C1 O2 75.8 300.1
C1 C2 H21 C1' 236.8 240.0
C1 C2 H21 H22 118.4 119.9
C1' C2 H21 H22 241.6 240.0
H21 C2 C1' C2' 335.7 330.0
H21 C2 C1' C6' 157.4 149.7
H22 C2 C1 O1 8.2 240.0
H22 C2 C1 O2 185.3 60.1
C1 C2 H22 C1' 123.1 120.0
C1 C2 H22 H21 241.5 240.0
C1' C2 H22 H21 118.4 120.0
H22 C2 C1' C2' 226.2 210.0
H22 C2 C1' C6' 48.0 29.7
C2' C1' C2 H21 335.7 330.0
C2' C1' C2 H22 226.2 210.0
C2 C1' C2' C6' 181.9 179.7
C2' C1' C6' C5' 0.3 359.6
C2' C1' C6' H6' 180.3 180.0
C3' C2' C1' H2' 180.0 180.0
C1' C2' C3' C4' 359.7 0.0
C1' C2' C3' H3' 179.7 180.0
C6' C1' C2 H21 157.4 149.7
C6' C1' C2 H22 48.0 29.7
C2 C1' C6' C2' 178.3 180.3
C6' C1' C2' C3' 360.0 0.2
C6' C1' C2' H2' 180.0 180.2
C4' C5' C6' C1' 359.7 0.4
C1' C6' C5' H5' 179.6 180.3
C5' C6' C1' H6' 180.0 179.6
C3' C2' C1' C6' 360.0 0.2
C1' C2' C3' H2' 180.0 180.0
C4' C3' C2' H3' 180.0 180.0
C2' C3' C4' C5' 0.3 359.9
C2' C3' C4' H4' 180.3 179.9
H2' C2' C1' C6' 180.0 180.2
C1' C2' H2' C3' 180.0 180.0
H2' C2' C3' C4' 179.7 180.0
H2' C2' C3' H3' 359.7 360.0
C4' C3' C2' H2' 179.7 180.0
C2' C3' C4' H3' 180.0 180.0
C5' C4' C3' H4' 180.0 180.0
C3' C4' C5' C6' 0.0 359.9
C3' C4' C5' H5' 180.0 179.9
H3' C3' C2' H2' 359.7 360.0
C2' C3' H3' C4' 180.0 180.0
H3' C3' C4' C5' 180.3 180.0
H3' C3' C4' H4' 0.3 360.0
C1' C6' C5' C4' 359.7 0.4
C5' C4' C3' H3' 180.3 180.0
C3' C4' C5' H4' 180.0 180.0
C6' C5' C4' H5' 180.0 179.9
C4' C5' C6' H6' 179.7 180.0
H4' C4' C3' H3' 0.3 360.0
C3' C4' H4' C5' 180.0 180.0
H4' C4' C5' C6' 180.0 179.9
H4' C4' C5' H5' 0.0 360.0
C1' C6' C5' H6' 180.0 180.4
C6' C5' C4' H4' 180.0 179.9
C4' C5' C6' H5' 180.0 180.1
H5' C5' C4' H4' 0.0 360.0
C4' C5' H5' C6' 180.0 179.9
H5' C5' C6' H6' 359.7 359.9
C1' C6' H6' C5' 180.0 179.6
H6' C6' C5' H5' 359.7 359.9