data_P7G
# 
_chem_comp.id                                    P7G 
_chem_comp.name                                  
;7-propyl, guanosine-5'-monophosphate
;
_chem_comp.type                                  "RNA linking" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C13 H22 N5 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               G 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-09-25 
_chem_comp.pdbx_modified_date                    2019-04-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        407.316 
_chem_comp.one_letter_code                       G 
_chem_comp.three_letter_code                     P7G 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6EK0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
P7G "C1'" C1  C 0 1 N N R 244.620 277.948 204.719 -0.243 1.801  -0.408 "C1'" P7G 1  
P7G C2    C2  C 0 1 N N N 241.383 276.878 201.744 -1.106 -2.217 1.406  C2    P7G 2  
P7G "C2'" C3  C 0 1 N N R 245.107 276.539 205.038 -0.005 2.288  1.044  "C2'" P7G 3  
P7G "C3'" C4  C 0 1 N N S 246.604 276.771 205.162 1.516  2.577  1.045  "C3'" P7G 4  
P7G C4    C5  C 0 1 N N N 243.368 277.776 202.553 -1.592 -0.281 0.125  C4    P7G 5  
P7G "C4'" C6  C 0 1 N N R 246.655 278.112 205.861 2.057  1.753  -0.139 "C4'" P7G 6  
P7G C5    C7  C 0 1 N N N 243.654 278.238 201.200 -2.824 -0.795 -0.148 C5    P7G 7  
P7G "C5'" C8  C 0 1 N N N 247.938 278.887 205.717 3.118  0.767  0.355  "C5'" P7G 8  
P7G C6    C9  C 0 1 N N N 242.684 277.972 200.138 -3.171 -2.058 0.381  C6    P7G 9  
P7G C8    C10 C 0 1 N N N 245.430 278.915 202.542 -2.673 1.254  -1.204 C8    P7G 10 
P7G N1    N1  N 0 1 N N N 241.598 277.291 200.493 -2.291 -2.724 1.143  N1    P7G 11 
P7G N2    N2  N 0 1 N N N 240.255 276.193 202.009 -0.231 -2.925 2.190  N2    P7G 12 
P7G N3    N3  N 0 1 N N N 242.234 277.101 202.761 -0.730 -1.008 0.913  N3    P7G 13 
P7G N7    N4  N 0 1 N N N 244.815 278.879 201.246 -3.550 0.099  -0.966 N7    P7G 14 
P7G N9    N5  N 0 1 N N N 244.408 278.167 203.269 -1.433 0.951  -0.478 N9    P7G 15 
P7G "O2'" O1  O 0 1 N N N 244.558 276.157 206.286 -0.750 3.478  1.311  "O2'" P7G 16 
P7G "O3'" O2  O 0 1 N N N 247.307 275.740 205.817 1.761  3.969  0.839  "O3'" P7G 17 
P7G "O4'" O3  O 0 1 N N N 245.583 278.849 205.220 0.946  1.038  -0.705 "O4'" P7G 18 
P7G "O5'" O4  O 0 1 N N N 247.997 279.528 204.455 3.696  0.090  -0.763 "O5'" P7G 19 
P7G O6    O5  O 0 1 N N N 242.860 278.335 198.963 -4.270 -2.542 0.146  O6    P7G 20 
P7G OP1   O6  O 0 1 N N N 248.729 281.124 202.737 5.987  -0.454 0.146  OP1   P7G 21 
P7G OP2   O7  O 0 1 N N N 250.265 280.511 204.738 4.266  -2.300 0.171  OP2   P7G 22 
P7G P     P1  P 0 1 N N N 248.908 280.795 204.184 4.851  -1.022 -0.614 P     P7G 23 
P7G C71   C11 C 0 1 N N N 245.674 279.553 200.263 -4.911 -0.089 -1.476 C71   P7G 24 
P7G C72   C12 C 0 1 N N N 245.007 280.701 199.535 -5.915 0.491  -0.478 C72   P7G 25 
P7G C73   C13 C 0 1 N N N 245.728 280.986 198.243 -7.335 0.295  -1.011 C73   P7G 26 
P7G OP3   O8  O 0 1 N Y N 248.233 281.975 205.028 5.353  -1.474 -2.075 OP3   P7G 27 
P7G H1    H1  H 0 1 N N N 243.664 278.104 205.240 -0.334 2.649  -1.087 H1    P7G 28 
P7G H2    H2  H 0 1 N N N 244.871 275.836 204.225 -0.253 1.507  1.762  H2    P7G 29 
P7G H3    H3  H 0 1 N N N 247.010 276.901 204.148 1.967  2.245  1.981  H3    P7G 30 
P7G H4    H4  H 0 1 N N N 246.432 277.973 206.929 2.489  2.418  -0.887 H4    P7G 31 
P7G H5    H5  H 0 1 N N N 248.789 278.197 205.812 3.895  1.309  0.893  H5    P7G 32 
P7G H6    H6  H 0 1 N N N 247.992 279.647 206.511 2.655  0.038  1.020  H6    P7G 33 
P7G H7    H7  H 0 1 N N N 246.406 278.408 202.555 -2.471 1.363  -2.270 H7    P7G 34 
P7G H8    H8  H 0 1 N N N 239.601 276.004 201.277 0.647  -2.562 2.386  H8    P7G 35 
P7G H9    H9  H 0 1 N N N 240.071 275.873 202.938 -0.489 -3.789 2.547  H9    P7G 36 
P7G H10   H10 H 0 1 N N N 242.017 276.761 203.676 0.151  -0.656 1.117  H10   P7G 37 
P7G H11   H11 H 0 1 N N N 244.849 275.280 206.505 -0.634 3.822  2.208  H11   P7G 38 
P7G H12   H12 H 0 1 N N N 248.231 275.959 205.854 1.390  4.540  1.526  H12   P7G 39 
P7G H13   H13 H 0 1 N N N 250.911 280.579 204.045 3.517  -2.724 -0.270 H13   P7G 40 
P7G H14   H14 H 0 1 N N N 245.992 278.810 199.517 -5.013 0.423  -2.433 H14   P7G 41 
P7G H15   H15 H 0 1 N N N 246.557 279.945 200.789 -5.105 -1.153 -1.610 H15   P7G 42 
P7G H16   H16 H 0 1 N N N 245.032 281.598 200.171 -5.812 -0.020 0.479  H16   P7G 43 
P7G H17   H17 H 0 1 N N N 243.962 280.435 199.317 -5.720 1.555  -0.344 H17   P7G 44 
P7G H18   H18 H 0 1 N N N 245.235 281.821 197.724 -7.438 0.807  -1.969 H18   P7G 45 
P7G H19   H19 H 0 1 N N N 246.773 281.254 198.458 -7.529 -0.769 -1.145 H19   P7G 46 
P7G H20   H20 H 0 1 N N N 245.703 280.091 197.604 -8.050 0.708  -0.300 H20   P7G 47 
P7G H21   H21 H 0 1 N N N 247.869 282.621 204.434 6.050  -2.144 -2.061 H21   P7G 48 
P7G H22   H22 H 0 1 N N N 245.545 279.941 202.921 -3.128 2.164  -0.811 H22   P7G 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
P7G C73   C72   SING N N 1  
P7G O6    C6    DOUB N N 2  
P7G C72   C71   SING N N 3  
P7G C6    N1    SING N N 4  
P7G C6    C5    SING N N 5  
P7G C71   N7    SING N N 6  
P7G N1    C2    DOUB N N 7  
P7G C5    N7    SING N N 8  
P7G C5    C4    DOUB N N 9  
P7G N7    C8    SING N N 10 
P7G C2    N2    SING N N 11 
P7G C2    N3    SING N N 12 
P7G C8    N9    SING N N 13 
P7G C4    N3    SING N N 14 
P7G C4    N9    SING N N 15 
P7G OP1   P     DOUB N N 16 
P7G N9    "C1'" SING N N 17 
P7G P     "O5'" SING N N 18 
P7G P     OP2   SING N N 19 
P7G "O5'" "C5'" SING N N 20 
P7G "C1'" "C2'" SING N N 21 
P7G "C1'" "O4'" SING N N 22 
P7G "C2'" "C3'" SING N N 23 
P7G "C2'" "O2'" SING N N 24 
P7G "C3'" "O3'" SING N N 25 
P7G "C3'" "C4'" SING N N 26 
P7G "O4'" "C4'" SING N N 27 
P7G "C5'" "C4'" SING N N 28 
P7G P     OP3   SING N N 29 
P7G "C1'" H1    SING N N 30 
P7G "C2'" H2    SING N N 31 
P7G "C3'" H3    SING N N 32 
P7G "C4'" H4    SING N N 33 
P7G "C5'" H5    SING N N 34 
P7G "C5'" H6    SING N N 35 
P7G C8    H7    SING N N 36 
P7G N2    H8    SING N N 37 
P7G N2    H9    SING N N 38 
P7G N3    H10   SING N N 39 
P7G "O2'" H11   SING N N 40 
P7G "O3'" H12   SING N N 41 
P7G OP2   H13   SING N N 42 
P7G C71   H14   SING N N 43 
P7G C71   H15   SING N N 44 
P7G C72   H16   SING N N 45 
P7G C72   H17   SING N N 46 
P7G C73   H18   SING N N 47 
P7G C73   H19   SING N N 48 
P7G C73   H20   SING N N 49 
P7G OP3   H21   SING N N 50 
P7G C8    H22   SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
P7G InChI            InChI                1.03  "InChI=1S/C13H22N5O8P/c1-2-3-17-5-18(10-7(17)11(21)16-13(14)15-10)12-9(20)8(19)6(26-12)4-25-27(22,23)24/h6,8-9,12,19-20H,2-5H2,1H3,(H2,22,23,24)(H3,14,15,16,21)/t6-,8-,9-,12-/m1/s1" 
P7G InChIKey         InChI                1.03  RYXOSWCCKYWJKM-WOUKDFQISA-N                                                                                                                                                           
P7G SMILES_CANONICAL CACTVS               3.385 "CCCN1CN([C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O)C3=C1C(=O)N=C(N)N3"                                                                                                             
P7G SMILES           CACTVS               3.385 "CCCN1CN([CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O)C3=C1C(=O)N=C(N)N3"                                                                                                                   
P7G SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCN1CN(C2=C1C(=O)N=C(N2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O"                                                                                                             
P7G SMILES           "OpenEye OEToolkits" 2.0.6 "CCCN1CN(C2=C1C(=O)N=C(N2)N)C3C(C(C(O3)COP(=O)(O)O)O)O"                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
P7G "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-7-propyl-3,8-dihydropurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
P7G "Create component"       2017-09-25 EBI  
P7G "Initial release"        2018-01-24 RCSB 
P7G "Modify one letter code" 2019-04-29 EBI  
# 
