PDB Chemical Component P6G

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for P6G

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C2 1.428 1.430
O1 H1 0.950 0.967
C2 C3 1.446 1.530
C2 H21 1.100 1.091
C2 H22 1.100 1.089
C3 O4 1.557 1.429
C3 H31 1.100 1.090
C3 H32 1.101 1.091
O4 C5 1.444 1.430
C5 C6 1.429 1.530
C5 H51 1.100 1.090
C5 H52 1.100 1.090
C6 O7 1.530 1.429
C6 H61 1.100 1.090
C6 H62 1.100 1.089
O7 C8 1.449 1.428
C8 C9 1.482 1.530
C8 H81 1.100 1.090
C8 H82 1.100 1.090
C9 O10 1.609 1.429
C9 H91 1.100 1.090
C9 H92 1.100 1.090
O10 C11 1.450 1.429
C11 C12 1.453 1.530
C11 H111 1.101 1.090
C11 H112 1.100 1.090
C12 O13 1.582 1.429
C12 H121 1.100 1.089
C12 H122 1.100 1.090
O13 C14 1.435 1.429
C14 C15 1.445 1.529
C14 H141 1.100 1.090
C14 H142 1.100 1.090
C15 O16 1.569 1.429
C15 H151 1.100 1.090
C15 H152 1.100 1.090
O16 C17 1.436 1.428
C17 C18 1.444 1.530
C17 H171 1.101 1.090
C17 H172 1.100 1.090
C18 O19 1.589 1.429
C18 H181 1.100 1.090
C18 H182 1.100 1.090
O19 H19 0.950 0.967

Bond Angles for P6G

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 O1 H1 109.5 114.0
O1 C2 C3 131.1 109.5
O1 C2 H21 102.8 109.4
O1 C2 H22 102.8 109.5
C3 C2 H21 102.8 109.5
C3 C2 H22 102.8 109.5
C2 C3 O4 114.9 109.5
C2 C3 H31 107.7 109.5
C2 C3 H32 107.7 109.4
H21 C2 H22 115.2 109.5
O4 C3 H31 107.7 109.5
O4 C3 H32 107.7 109.4
C3 O4 C5 113.6 114.0
H31 C3 H32 111.2 109.5
O4 C5 C6 106.8 109.4
O4 C5 H51 110.4 109.5
O4 C5 H52 110.3 109.4
C6 C5 H51 110.3 109.5
C6 C5 H52 110.4 109.5
C5 C6 O7 117.1 109.5
C5 C6 H61 107.0 109.4
C5 C6 H62 107.0 109.5
H51 C5 H52 108.6 109.5
O7 C6 H61 107.0 109.4
O7 C6 H62 107.0 109.5
C6 O7 C8 113.1 114.0
H61 C6 H62 111.8 109.5
O7 C8 C9 111.3 109.5
O7 C8 H81 108.9 109.4
O7 C8 H82 108.9 109.5
C9 C8 H81 108.9 109.4
C9 C8 H82 108.9 109.5
C8 C9 O10 116.1 109.5
C8 C9 H91 107.4 109.5
C8 C9 H92 107.3 109.5
H81 C8 H82 110.1 109.5
O10 C9 H91 107.3 109.5
O10 C9 H92 107.3 109.5
C9 O10 C11 118.2 114.0
H91 C9 H92 111.5 109.4
O10 C11 C12 110.8 109.5
O10 C11 H111 109.0 109.4
O10 C11 H112 109.0 109.5
C12 C11 H111 109.0 109.5
C12 C11 H112 109.0 109.5
C11 C12 O13 116.7 109.5
C11 C12 H121 107.1 109.5
C11 C12 H122 107.1 109.4
H111 C11 H112 109.9 109.4
O13 C12 H121 107.1 109.5
O13 C12 H122 107.1 109.4
C12 O13 C14 117.7 114.0
H121 C12 H122 111.7 109.5
O13 C14 C15 113.2 109.5
O13 C14 H141 108.3 109.4
O13 C14 H142 108.3 109.4
C15 C14 H141 108.2 109.5
C15 C14 H142 108.3 109.5
C14 C15 O16 116.6 109.5
C14 C15 H151 107.2 109.5
C14 C15 H152 107.1 109.5
H141 C14 H142 110.6 109.5
O16 C15 H151 107.1 109.4
O16 C15 H152 107.2 109.4
C15 O16 C17 117.4 114.0
H151 C15 H152 111.7 109.5
O16 C17 C18 108.4 109.5
O16 C17 H171 109.8 109.5
O16 C17 H172 109.8 109.5
C18 C17 H171 109.8 109.4
C18 C17 H172 109.8 109.5
C17 C18 O19 113.3 109.5
C17 C18 H181 108.2 109.5
C17 C18 H182 108.2 109.5
H171 C17 H172 109.1 109.5
O19 C18 H181 108.3 109.5
O19 C18 H182 108.2 109.5
C18 O19 H19 109.5 114.0
H181 C18 H182 110.7 109.5

Torsion Angles for P6G

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C2 O1 H21 240.0 240.0
C3 C2 O1 H22 120.0 120.1
O1 C2 C3 O4 342.4 64.9
O1 C2 C3 H31 102.4 185.0
O1 C2 C3 H32 222.4 305.0
H21 C2 O1 H22 240.0 240.0
H1 O1 C2 C3 180.0 180.0
H1 O1 C2 H21 300.0 300.0
H1 O1 C2 H22 60.0 59.9
C3 C2 O1 H1 180.0 180.0
O1 C2 C3 H21 120.0 120.0
O1 C2 C3 H22 240.0 240.0
H21 C2 C3 H22 120.0 120.0
O4 C3 C2 H31 240.0 239.9
O4 C3 C2 H32 120.0 119.9
C2 C3 O4 C5 151.3 180.0
H31 C3 C2 H32 240.0 240.0
H21 C2 O1 H1 300.0 300.0
O1 C2 H21 C3 222.0 240.0
O1 C2 H21 H22 111.0 120.0
C3 C2 H21 H22 249.0 240.0
H21 C2 C3 O4 222.5 304.9
H21 C2 C3 H31 342.4 65.0
H21 C2 C3 H32 102.4 185.0
H22 C2 O1 H1 60.0 59.9
O1 C2 H22 C3 138.0 120.1
O1 C2 H22 H21 249.0 240.1
C3 C2 H22 H21 111.0 120.0
H22 C2 C3 O4 102.5 184.9
H22 C2 C3 H31 222.5 305.1
H22 C2 C3 H32 342.4 65.0
O4 C3 C2 H21 222.5 304.9
O4 C3 C2 H22 102.5 184.9
C2 C3 O4 H31 120.0 120.1
C2 C3 O4 H32 240.0 240.1
H31 C3 O4 H32 120.0 120.0
C3 O4 C5 C6 200.5 180.0
C3 O4 C5 H51 320.4 300.1
C3 O4 C5 H52 80.4 60.1
H31 C3 C2 H21 342.4 65.0
H31 C3 C2 H22 222.5 305.1
C2 C3 H31 O4 235.5 239.9
C2 C3 H31 H32 117.7 120.0
O4 C3 H31 H32 242.2 240.1
H31 C3 O4 C5 31.3 59.9
H32 C3 C2 H21 102.4 185.0
H32 C3 C2 H22 342.4 65.0
C2 C3 H32 O4 124.5 120.0
C2 C3 H32 H31 242.3 240.0
O4 C3 H32 H31 117.8 120.0
H32 C3 O4 C5 271.3 299.9
C5 O4 C3 H31 31.3 59.9
C5 O4 C3 H32 271.3 299.9
C6 C5 O4 H51 240.0 240.0
C6 C5 O4 H52 120.0 120.0
O4 C5 C6 O7 306.0 65.1
O4 C5 C6 H61 66.0 185.0
O4 C5 C6 H62 186.0 305.0
H51 C5 O4 H52 240.0 240.0
O4 C5 C6 H51 120.0 120.0
O4 C5 C6 H52 240.0 240.1
H51 C5 C6 H52 120.0 120.1
O7 C6 C5 H61 240.0 240.0
O7 C6 C5 H62 120.0 120.0
C5 C6 O7 C8 217.3 180.0
H61 C6 C5 H62 240.0 240.0
O4 C5 H51 C6 242.1 240.0
O4 C5 H51 H52 121.1 120.0
C6 C5 H51 H52 238.9 239.9
H51 C5 C6 O7 186.0 305.1
H51 C5 C6 H61 306.0 65.0
H51 C5 C6 H62 66.0 185.0
O4 C5 H52 C6 117.9 119.9
O4 C5 H52 H51 238.9 240.0
C6 C5 H52 H51 121.1 120.1
H52 C5 C6 O7 66.0 185.0
H52 C5 C6 H61 186.0 305.0
H52 C5 C6 H62 306.0 65.0
O7 C6 C5 H51 186.0 305.1
O7 C6 C5 H52 66.0 185.0
C5 C6 O7 H61 120.0 120.0
C5 C6 O7 H62 240.0 239.9
H61 C6 O7 H62 120.0 120.0
C6 O7 C8 C9 180.0 180.0
C6 O7 C8 H81 300.0 300.0
C6 O7 C8 H82 60.0 59.9
H61 C6 C5 H51 306.0 65.0
H61 C6 C5 H52 186.0 305.0
C5 C6 H61 O7 233.8 240.0
C5 C6 H61 H62 116.9 120.0
O7 C6 H61 H62 243.1 240.0
H61 C6 O7 C8 97.3 60.0
H62 C6 C5 H51 66.0 185.0
H62 C6 C5 H52 306.0 65.0
C5 C6 H62 O7 126.3 120.0
C5 C6 H62 H61 243.1 240.0
O7 C6 H62 H61 116.8 120.0
H62 C6 O7 C8 337.3 300.1
C8 O7 C6 H61 97.3 60.0
C8 O7 C6 H62 337.3 300.1
C9 C8 O7 H81 240.0 240.0
C9 C8 O7 H82 120.0 120.1
O7 C8 C9 O10 267.6 65.0
O7 C8 C9 H91 27.6 185.0
O7 C8 C9 H92 147.6 305.0
H81 C8 O7 H82 240.0 240.0
O7 C8 C9 H81 120.0 120.0
O7 C8 C9 H82 240.0 239.9
H81 C8 C9 H82 120.0 120.0
O10 C9 C8 H91 240.0 239.9
O10 C9 C8 H92 120.0 120.0
C8 C9 O10 C11 253.3 180.0
H91 C9 C8 H92 240.0 240.0
O7 C8 H81 C9 238.5 240.0
O7 C8 H81 H82 119.2 120.0
C9 C8 H81 H82 240.7 240.0
H81 C8 C9 O10 147.6 305.0
H81 C8 C9 H91 267.6 65.1
H81 C8 C9 H92 27.6 185.0
O7 C8 H82 C9 121.5 120.1
O7 C8 H82 H81 240.8 240.1
C9 C8 H82 H81 119.3 120.0
H82 C8 C9 O10 27.6 185.0
H82 C8 C9 H91 147.6 305.1
H82 C8 C9 H92 267.6 65.0
O10 C9 C8 H81 147.6 305.0
O10 C9 C8 H82 27.6 185.0
C8 C9 O10 H91 120.0 120.1
C8 C9 O10 H92 240.0 240.0
H91 C9 O10 H92 120.0 120.0
C9 O10 C11 C12 180.4 180.0
C9 O10 C11 H111 300.4 300.0
C9 O10 C11 H112 60.4 60.0
H91 C9 C8 H81 267.6 65.1
H91 C9 C8 H82 147.6 305.1
C8 C9 H91 O10 234.5 240.0
C8 C9 H91 H92 117.3 120.0
O10 C9 H91 H92 242.7 240.0
H91 C9 O10 C11 133.2 60.0
H92 C9 C8 H81 27.6 185.0
H92 C9 C8 H82 267.6 65.0
C8 C9 H92 O10 125.4 120.0
C8 C9 H92 H91 242.7 240.0
O10 C9 H92 H91 117.2 120.0
H92 C9 O10 C11 13.3 300.0
C11 O10 C9 H91 133.2 60.0
C11 O10 C9 H92 13.3 300.0
C12 C11 O10 H111 240.0 240.0
C12 C11 O10 H112 120.0 120.0
O10 C11 C12 O13 256.4 64.9
O10 C11 C12 H121 16.4 185.0
O10 C11 C12 H122 136.4 305.0
H111 C11 O10 H112 240.0 240.0
O10 C11 C12 H111 120.0 120.0
O10 C11 C12 H112 240.0 239.9
H111 C11 C12 H112 120.0 120.0
O13 C12 C11 H121 240.0 239.9
O13 C12 C11 H122 120.0 119.9
C11 C12 O13 C14 239.0 180.0
H121 C12 C11 H122 240.0 240.0
O10 C11 H111 C12 238.9 240.0
O10 C11 H111 H112 119.5 120.0
C12 C11 H111 H112 240.5 240.0
H111 C11 C12 O13 136.4 304.9
H111 C11 C12 H121 256.4 65.0
H111 C11 C12 H122 16.4 185.0
O10 C11 H112 C12 121.1 120.1
O10 C11 H112 H111 240.5 240.0
C12 C11 H112 H111 119.4 120.0
H112 C11 C12 O13 16.4 185.0
H112 C11 C12 H121 136.4 305.1
H112 C11 C12 H122 256.4 65.1
O13 C12 C11 H111 136.4 304.9
O13 C12 C11 H112 16.4 185.0
C11 C12 O13 H121 120.0 120.1
C11 C12 O13 H122 240.0 240.1
H121 C12 O13 H122 120.0 120.0
C12 O13 C14 C15 179.1 180.0
C12 O13 C14 H141 299.1 300.1
C12 O13 C14 H142 59.1 60.1
H121 C12 C11 H111 256.4 65.0
H121 C12 C11 H112 136.4 305.1
C11 C12 H121 O13 234.0 240.0
C11 C12 H121 H122 117.0 120.0
O13 C12 H121 H122 243.0 240.0
H121 C12 O13 C14 118.9 59.9
H122 C12 C11 H111 16.4 185.0
H122 C12 C11 H112 256.4 65.1
C11 C12 H122 O13 126.0 119.9
C11 C12 H122 H121 243.0 240.0
O13 C12 H122 H121 117.0 120.0
H122 C12 O13 C14 358.9 299.9
C14 O13 C12 H121 118.9 59.9
C14 O13 C12 H122 358.9 299.9
C15 C14 O13 H141 240.0 240.0
C15 C14 O13 H142 120.0 120.0
O13 C14 C15 O16 359.9 65.0
O13 C14 C15 H151 119.9 185.0
O13 C14 C15 H152 239.9 305.0
H141 C14 O13 H142 240.0 240.0
O13 C14 C15 H141 120.0 120.0
O13 C14 C15 H142 240.0 240.0
H141 C14 C15 H142 120.0 120.0
O16 C15 C14 H151 240.0 240.0
O16 C15 C14 H152 120.0 120.0
C14 C15 O16 C17 216.3 180.0
H151 C15 C14 H152 240.0 240.0
O13 C14 H141 C15 237.0 240.0
O13 C14 H141 H142 118.5 119.9
C15 C14 H141 H142 241.5 240.0
H141 C14 C15 O16 239.9 305.0
H141 C14 C15 H151 359.9 65.0
H141 C14 C15 H152 119.9 185.0
O13 C14 H142 C15 123.0 120.0
O13 C14 H142 H141 241.5 240.1
C15 C14 H142 H141 118.5 120.1
H142 C14 C15 O16 119.9 185.0
H142 C14 C15 H151 239.9 305.0
H142 C14 C15 H152 359.9 65.0
O16 C15 C14 H141 239.9 305.0
O16 C15 C14 H142 119.9 185.0
C14 C15 O16 H151 120.0 120.0
C14 C15 O16 H152 240.0 240.0
H151 C15 O16 H152 120.0 120.0
C15 O16 C17 C18 201.7 180.0
C15 O16 C17 H171 321.7 300.0
C15 O16 C17 H172 81.7 60.0
H151 C15 C14 H141 359.9 65.0
H151 C15 C14 H142 239.9 305.0
C14 C15 H151 O16 234.1 240.0
C14 C15 H151 H152 117.1 120.0
O16 C15 H151 H152 242.9 240.1
H151 C15 O16 C17 96.3 60.0
H152 C15 C14 H141 119.9 185.0
H152 C15 C14 H142 359.9 65.0
C14 C15 H152 O16 125.9 120.0
C14 C15 H152 H151 242.9 240.0
O16 C15 H152 H151 117.1 119.9
H152 C15 O16 C17 336.3 300.0
C17 O16 C15 H151 96.3 60.0
C17 O16 C15 H152 336.3 300.0
C18 C17 O16 H171 240.0 240.0
C18 C17 O16 H172 120.0 120.0
O16 C17 C18 O19 240.9 65.0
O16 C17 C18 H181 0.9 185.0
O16 C17 C18 H182 120.9 305.0
H171 C17 O16 H172 240.0 240.0
O16 C17 C18 H171 120.0 120.0
O16 C17 C18 H172 240.0 240.0
H171 C17 C18 H172 120.0 120.0
O19 C18 C17 H181 240.0 240.0
O19 C18 C17 H182 120.0 120.0
C17 C18 O19 H19 180.0 180.0
H181 C18 C17 H182 240.0 240.0
O16 C17 H171 C18 240.8 240.0
O16 C17 H171 H172 120.4 120.0
C18 C17 H171 H172 239.6 240.0
H171 C17 C18 O19 120.9 305.0
H171 C17 C18 H181 240.9 65.0
H171 C17 C18 H182 0.9 185.0
O16 C17 H172 C18 119.2 120.0
O16 C17 H172 H171 239.6 240.0
C18 C17 H172 H171 120.4 120.0
H172 C17 C18 O19 0.9 185.0
H172 C17 C18 H181 120.9 305.0
H172 C17 C18 H182 240.9 65.0
O19 C18 C17 H171 120.9 305.0
O19 C18 C17 H172 0.9 185.0
C17 C18 O19 H181 120.0 120.0
C17 C18 O19 H182 240.0 240.0
H181 C18 O19 H182 120.0 120.0
H181 C18 C17 H171 240.9 65.0
H181 C18 C17 H172 120.9 305.0
C17 C18 H181 O19 236.9 240.0
C17 C18 H181 H182 118.4 120.0
O19 C18 H181 H182 241.5 240.0
H181 C18 O19 H19 60.0 60.0
H182 C18 C17 H171 0.9 185.0
H182 C18 C17 H172 240.9 65.0
C17 C18 H182 O19 123.1 120.0
C17 C18 H182 H181 241.6 240.0
O19 C18 H182 H181 118.5 120.0
H182 C18 O19 H19 300.0 300.0
H19 O19 C18 H181 60.0 60.0
H19 O19 C18 H182 300.0 300.0