PDB Chemical Component P5P

Ideal Model

Chemical Description

Name PURINE RIBOSIDE-5'-MONOPHOSPHATE
Formula C10 H13 N4 O7 P
Formal charge 0
Molecular weight 332.207 g/mol
Component type RNA LINKING
Nonstandard Parent Id A

Chemical features

Atom count 35
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Observed leaving atoms OP3 HO3'
Bond count 37
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 9-(5-O-phosphono-beta-D-ribofuranosyl)-9H-purine
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-3,4-dihydroxy-5-purin-9-yl-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3cncnc23
SMILES (CACTVS) O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3cncnc23
Stereo SMILES (OpenEye) c1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
InChI descriptor InChI=1/C10H13N4O7P/c15-7-6(2-20-22(17,18)19)21-10(8(7)16)14-4-13-5-1-11-3-12-9(5)14/h1,3-4,6-8,10,15-16H,2H2,(H2,17,18,19)/t6-,7-,8-,10-/m1/s1/f/h17-18H
InChIKey descriptor MCWDCZIDTUQRHK-DUAZENTCDO

Status Information

Last modified 2009-01-07
Created 1999-07-08
Release status REL
Model PDB code 1RBN
Processing site RCSB