PDB Chemical Component P4P

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for P4P

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
P C1A 1.766 1.815
P C1C 1.776 1.814
P C1D 1.820 1.814
P C1B 1.762 1.813
C1A C2A 1.397 1.382
C1A C6A 1.407 1.382
C2A C3A 1.396 1.382
C2A H2A 1.102 1.081
C3A C4A 1.397 1.382
C3A H3A 1.102 1.081
C4A C5A 1.394 1.382
C4A H4A 1.103 1.080
C5A C6A 1.396 1.382
C5A H5A 1.103 1.080
C6A H6A 1.104 1.080
C1C C6C 1.401 1.382
C1C C2C 1.394 1.382
C6C C5C 1.404 1.383
C6C H6C 1.103 1.080
C5C C4C 1.387 1.383
C5C H5C 1.104 1.080
C4C C3C 1.395 1.382
C4C H4C 1.103 1.081
C3C C2C 1.403 1.383
C3C H3C 1.103 1.080
C2C H2C 1.102 1.080
C1D C6D 1.402 1.382
C1D C2D 1.402 1.382
C6D C5D 1.396 1.382
C6D H6D 1.103 1.079
C5D C4D 1.394 1.382
C5D H5D 1.103 1.081
C4D C3D 1.396 1.382
C4D H4D 1.104 1.080
C3D C2D 1.401 1.383
C3D H3D 1.104 1.080
C2D H2D 1.103 1.081
C6B C5B 1.394 1.382
C6B C1B 1.406 1.382
C6B H6B 1.103 1.080
C5B C4B 1.389 1.383
C5B H5B 1.103 1.080
C4B C3B 1.404 1.382
C4B H4B 1.102 1.080
C3B C2B 1.407 1.383
C3B H3B 1.103 1.080
C2B C1B 1.395 1.382
C2B H2B 1.103 1.080

Bond Angles for P4P

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1A P C1C 110.2 109.5
C1A P C1D 106.9 109.5
C1A P C1B 113.9 109.4
P C1A C2A 123.2 120.0
P C1A C6A 117.6 120.0
C1C P C1D 111.3 109.5
C1C P C1B 106.5 109.5
P C1C C6C 118.2 120.0
P C1C C2C 122.9 120.0
C1D P C1B 108.0 109.5
P C1D C6D 117.1 120.0
P C1D C2D 123.9 120.0
P C1B C6B 116.9 120.0
P C1B C2B 123.9 120.0
C2A C1A C6A 119.2 120.0
C1A C2A C3A 120.3 120.0
C1A C2A H2A 119.8 120.0
C1A C6A C5A 120.4 120.0
C1A C6A H6A 120.2 120.0
C3A C2A H2A 119.8 120.0
C2A C3A C4A 120.1 120.0
C2A C3A H3A 120.0 120.0
C4A C3A H3A 119.9 120.0
C3A C4A C5A 120.0 120.0
C3A C4A H4A 120.2 120.1
C5A C4A H4A 119.8 120.0
C4A C5A C6A 119.9 120.0
C4A C5A H5A 120.0 120.0
C6A C5A H5A 120.1 120.0
C5A C6A H6A 119.4 120.1
C6C C1C C2C 118.9 120.1
C1C C6C C5C 120.6 120.0
C1C C6C H6C 119.6 120.1
C1C C2C C3C 120.5 120.0
C1C C2C H2C 119.4 120.0
C5C C6C H6C 119.8 119.9
C6C C5C C4C 119.9 120.0
C6C C5C H5C 120.7 120.0
C4C C5C H5C 119.5 120.0
C5C C4C C3C 120.0 120.0
C5C C4C H4C 119.7 120.0
C3C C4C H4C 120.3 120.0
C4C C3C C2C 120.0 120.0
C4C C3C H3C 119.7 120.0
C2C C3C H3C 120.3 120.0
C3C C2C H2C 120.1 120.0
C6D C1D C2D 119.0 120.0
C1D C6D C5D 120.6 120.0
C1D C6D H6D 119.9 120.0
C1D C2D C3D 120.6 120.0
C1D C2D H2D 119.8 120.0
C5D C6D H6D 119.5 120.1
C6D C5D C4D 119.9 120.1
C6D C5D H5D 120.2 119.9
C4D C5D H5D 119.9 120.0
C5D C4D C3D 120.4 120.0
C5D C4D H4D 119.7 120.0
C3D C4D H4D 119.9 120.0
C4D C3D C2D 119.6 120.0
C4D C3D H3D 120.0 120.0
C2D C3D H3D 120.4 120.0
C3D C2D H2D 119.7 120.0
C5B C6B C1B 121.1 120.0
C5B C6B H6B 119.1 120.0
C6B C5B C4B 119.6 120.0
C6B C5B H5B 120.3 120.0
C1B C6B H6B 119.8 120.0
C6B C1B C2B 119.2 120.0
C4B C5B H5B 120.1 119.9
C5B C4B C3B 120.2 120.0
C5B C4B H4B 119.3 120.0
C3B C4B H4B 120.5 120.1
C4B C3B C2B 120.1 120.0
C4B C3B H3B 119.8 120.0
C2B C3B H3B 120.1 120.0
C3B C2B C1B 119.9 120.0
C3B C2B H2B 120.6 120.0
C1B C2B H2B 119.5 120.0

Torsion Angles for P4P

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1C P C1A C1D 121.2 240.0
C1C P C1A C1B 240.4 120.0
C1A P C1C C6C 315.0 100.1
C1A P C1C C2C 135.9 279.8
C1D P C1A C1B 119.3 240.0
C1A P C1D C6D 319.2 150.0
C1A P C1D C2D 140.1 329.7
C1A P C1B C6B 110.7 335.4
C1A P C1B C2B 290.0 155.7
C2A C1A P C6A 180.1 180.0
P C1A C2A C3A 180.1 180.1
P C1A C2A H2A 0.1 359.9
P C1A C6A C5A 179.8 180.0
P C1A C6A H6A 359.9 0.0
C1A P C1C C1D 241.5 120.0
C1A P C1C C1B 123.9 240.0
C1C P C1A C2A 267.4 199.0
C1C P C1A C6A 87.3 19.0
C1D P C1C C1B 242.5 120.0
C1C P C1D C6D 198.7 270.0
C1C P C1D C2D 19.6 89.7
C1C P C1B C6B 232.3 215.4
C1C P C1B C2B 51.7 35.7
C6C C1C P C2C 179.1 180.3
P C1C C6C C5C 180.3 180.0
P C1C C6C H6C 0.2 360.0
P C1C C2C C3C 179.5 179.8
P C1C C2C H2C 359.5 0.2
C1A P C1D C1C 120.5 240.0
C1A P C1D C1B 237.0 120.0
C1D P C1A C2A 146.2 319.0
C1D P C1A C6A 326.1 139.0
C1C P C1D C1B 116.6 240.0
C1D P C1C C6C 73.6 340.1
C1D P C1C C2C 254.4 159.8
C1D P C1B C6B 352.0 95.4
C1D P C1B C2B 171.4 275.6
C6D C1D P C2D 179.1 180.4
P C1D C6D C5D 179.9 180.0
P C1D C6D H6D 359.9 359.9
P C1D C2D C3D 179.9 179.8
P C1D C2D H2D 359.9 0.3
C1A P C1B C1C 238.3 120.0
C1A P C1B C1D 118.6 240.0
C1B P C1A C2A 26.9 79.0
C1B P C1A C6A 206.9 259.0
C1C P C1B C1D 240.3 120.0
C1B P C1C C6C 191.1 220.1
C1B P C1C C2C 12.0 39.8
C1B P C1D C6D 82.1 30.1
C1B P C1D C2D 263.0 209.7
C5B C6B C1B P 179.7 179.8
P C1B C6B H6B 359.7 0.2
C6B C1B P C2B 180.6 179.7
C3B C2B C1B P 180.4 180.0
P C1B C2B H2B 0.3 0.0
C2A C1A P C1C 267.4 199.0
C2A C1A P C1D 146.2 319.0
C2A C1A P C1B 26.9 79.0
P C1A C2A C6A 179.9 180.0
C2A C1A C6A C5A 359.8 360.0
C2A C1A C6A H6A 179.8 180.0
C3A C2A C1A H2A 180.0 180.2
C1A C2A C3A C4A 359.8 359.9
C1A C2A C3A H3A 179.8 180.0
C6A C1A P C1C 87.3 19.0
C6A C1A P C1D 326.1 139.0
C6A C1A P C1B 206.9 259.0
P C1A C6A C2A 180.1 180.0
C6A C1A C2A C3A 0.2 0.1
C6A C1A C2A H2A 180.2 179.9
C4A C5A C6A C1A 0.2 360.0
C1A C6A C5A H5A 180.2 180.1
C5A C6A C1A H6A 180.0 180.0
C3A C2A C1A C6A 0.2 0.1
C1A C2A C3A H2A 180.0 179.8
C4A C3A C2A H3A 180.0 179.9
C2A C3A C4A C5A 0.1 0.1
C2A C3A C4A H4A 180.1 180.3
H2A C2A C1A C6A 180.2 179.9
C1A C2A H2A C3A 180.0 180.2
H2A C2A C3A C4A 179.8 180.0
H2A C2A C3A H3A 359.9 0.1
C4A C3A C2A H2A 179.8 180.0
C2A C3A C4A H3A 180.0 180.1
C5A C4A C3A H4A 180.0 179.8
C3A C4A C5A C6A 359.8 0.0
C3A C4A C5A H5A 179.8 179.9
H3A C3A C2A H2A 359.9 0.1
C2A C3A H3A C4A 180.0 179.9
H3A C3A C4A C5A 180.1 180.0
H3A C3A C4A H4A 0.1 0.2
C1A C6A C5A C4A 0.2 360.0
C5A C4A C3A H3A 180.1 180.0
C3A C4A C5A H4A 180.0 180.2
C6A C5A C4A H5A 180.0 180.1
C4A C5A C6A H6A 180.2 179.9
H4A C4A C3A H3A 0.1 0.2
C3A C4A H4A C5A 180.0 179.8
H4A C4A C5A C6A 179.8 179.8
H4A C4A C5A H5A 359.8 359.7
C1A C6A C5A H6A 180.0 180.0
C6A C5A C4A H4A 179.8 179.8
C4A C5A C6A H5A 180.0 179.9
H5A C5A C4A H4A 359.8 359.7
C4A C5A H5A C6A 180.0 180.1
H5A C5A C6A H6A 0.2 0.0
C1A C6A H6A C5A 180.0 180.0
H6A C6A C5A H5A 0.2 0.0
C6C C1C P C1D 73.6 340.1
C6C C1C P C1B 191.1 220.1
P C1C C6C C2C 180.9 179.7
C6C C1C C2C C3C 0.4 359.5
C6C C1C C2C H2C 180.4 180.0
C5C C6C C1C H6C 180.0 180.0
C1C C6C C5C C4C 0.5 359.9
C1C C6C C5C H5C 180.4 180.0
C2C C1C P C1D 254.4 159.8
C2C C1C P C1B 12.0 39.8
P C1C C2C C6C 179.1 180.3
C2C C1C C6C C5C 359.4 0.3
C2C C1C C6C H6C 179.4 180.2
C4C C3C C2C C1C 359.9 0.4
C1C C2C C3C H3C 179.9 180.2
C3C C2C C1C H2C 180.0 179.6
C5C C6C C1C C2C 359.4 0.3
C1C C6C C5C H6C 180.0 180.0
C4C C5C C6C H5C 180.0 180.0
C6C C5C C4C C3C 359.8 0.0
C6C C5C C4C H4C 179.8 180.0
H6C C6C C1C C2C 179.4 180.2
C1C C6C H6C C5C 180.0 180.0
H6C C6C C5C C4C 180.5 180.0
H6C C6C C5C H5C 0.4 0.0
C4C C5C C6C H6C 180.5 180.0
C6C C5C C4C H5C 180.0 180.0
C3C C4C C5C H4C 180.0 180.1
C5C C4C C3C C2C 0.0 359.8
C5C C4C C3C H3C 180.0 180.0
H5C C5C C6C H6C 0.4 0.0
C6C C5C H5C C4C 180.0 180.0
H5C C5C C4C C3C 179.9 180.0
H5C C5C C4C H4C 359.9 359.9
C1C C2C C3C C4C 359.9 0.4
C3C C4C C5C H5C 179.9 180.0
C5C C4C C3C H4C 180.0 179.9
C2C C3C C4C H3C 180.0 179.8
C4C C3C C2C H2C 179.9 180.0
H4C C4C C5C H5C 359.9 359.9
C5C C4C H4C C3C 180.0 180.1
H4C C4C C3C C2C 180.0 179.9
H4C C4C C3C H3C 360.0 0.1
C1C C2C C3C H2C 180.0 180.4
C2C C3C C4C H4C 180.0 179.9
C4C C3C C2C H3C 180.0 180.2
H3C C3C C4C H4C 360.0 0.1
C4C C3C H3C C2C 180.0 179.8
H3C C3C C2C H2C 359.9 359.8
C1C C2C H2C C3C 180.0 179.6
H2C C2C C3C H3C 359.9 359.8
C6D C1D P C1B 82.1 30.1
P C1D C6D C2D 180.9 179.6
C6D C1D C2D C3D 0.9 359.4
C6D C1D C2D H2D 180.8 180.0
C5D C6D C1D H6D 180.0 180.1
C1D C6D C5D C4D 0.5 359.9
C1D C6D C5D H5D 180.5 180.0
C2D C1D P C1B 263.0 209.7
P C1D C2D C6D 179.1 180.4
C2D C1D C6D C5D 359.0 0.4
C2D C1D C6D H6D 179.0 180.3
C4D C3D C2D C1D 359.7 0.5
C1D C2D C3D H3D 179.7 180.3
C3D C2D C1D H2D 180.0 179.5
C5D C6D C1D C2D 359.0 0.4
C1D C6D C5D H6D 180.0 179.9
C4D C5D C6D H5D 180.0 180.0
C6D C5D C4D C3D 0.2 360.0
C6D C5D C4D H4D 180.2 180.0
H6D C6D C1D C2D 179.0 180.3
C1D C6D H6D C5D 180.0 180.1
H6D C6D C5D C4D 180.5 180.0
H6D C6D C5D H5D 0.5 0.1
C4D C5D C6D H6D 180.5 180.0
C6D C5D C4D H5D 180.0 180.0
C3D C4D C5D H4D 180.0 180.0
C5D C4D C3D C2D 359.8 359.8
C5D C4D C3D H3D 179.8 180.0
H5D C5D C6D H6D 0.5 0.1
C6D C5D H5D C4D 180.0 180.0
H5D C5D C4D C3D 180.1 180.0
H5D C5D C4D H4D 0.1 359.9
C1D C2D C3D C4D 359.7 0.5
C3D C4D C5D H5D 180.1 180.0
C5D C4D C3D H4D 180.0 180.0
C2D C3D C4D H3D 180.0 179.8
C4D C3D C2D H2D 179.7 180.0
H4D C4D C5D H5D 0.1 359.9
C5D C4D H4D C3D 180.0 180.0
H4D C4D C3D C2D 179.7 179.8
H4D C4D C3D H3D 359.8 360.0
C1D C2D C3D H2D 180.0 180.5
C2D C3D C4D H4D 179.7 179.8
C4D C3D C2D H3D 180.0 180.2
H3D C3D C4D H4D 359.8 360.0
C4D C3D H3D C2D 180.0 179.8
H3D C3D C2D H2D 359.7 359.8
C1D C2D H2D C3D 180.0 179.5
H2D C2D C3D H3D 359.7 359.8
P C1B C6B C5B 179.7 179.8
C1B C6B C5B H6B 180.0 180.4
C5B C6B C1B C2B 0.3 359.6
C4B C5B C6B H5B 180.0 180.1
C6B C5B C4B C3B 0.2 359.9
C6B C5B C4B H4B 180.2 179.9
P C1B C6B C2B 179.4 180.3
C5B C6B C1B H6B 180.0 179.6
C1B C6B C5B C4B 359.7 0.4
C1B C6B C5B H5B 179.8 180.3
C3B C2B C1B C6B 359.7 0.2
C6B C1B C2B H2B 179.7 180.3
C5B C6B H6B C1B 180.0 180.4
H6B C6B C5B C4B 179.8 180.0
H6B C6B C5B H5B 359.8 359.9
H6B C6B C1B C2B 180.3 180.0
C4B C5B C6B C1B 359.7 0.4
C4B C5B C6B H6B 179.8 180.0
C6B C5B C4B H5B 180.0 179.9
C3B C4B C5B H4B 180.0 180.0
C5B C4B C3B C2B 359.8 359.9
C5B C4B C3B H3B 179.8 180.0
H5B C5B C6B C1B 179.8 180.3
H5B C5B C6B H6B 359.8 359.9
C6B C5B H5B C4B 180.0 180.1
H5B C5B C4B C3B 180.2 180.0
H5B C5B C4B H4B 0.2 360.0
C3B C4B C5B H5B 180.2 180.0
C5B C4B C3B H4B 180.0 180.0
C2B C3B C4B H3B 180.0 180.0
C4B C3B C2B C1B 0.2 0.0
C4B C3B C2B H2B 180.3 180.0
H4B C4B C5B H5B 0.2 360.0
C5B C4B H4B C3B 180.0 180.0
H4B C4B C3B C2B 179.8 179.9
H4B C4B C3B H3B 359.8 360.0
P C1B C2B C3B 180.4 180.0
C6B C1B C2B C3B 359.7 0.2
C2B C3B C4B H4B 179.8 179.9
C4B C3B C2B H3B 180.0 180.0
C1B C2B C3B H2B 180.0 180.0
H3B C3B C4B H4B 359.8 360.0
C4B C3B H3B C2B 180.0 180.0
H3B C3B C2B C1B 180.2 180.0
H3B C3B C2B H2B 0.2 359.9
P C1B C2B C6B 180.6 179.7
C2B C1B C6B H6B 180.3 180.0
C1B C2B C3B H3B 180.2 180.0
C3B C2B C1B H2B 180.0 180.0
H2B C2B C3B H3B 0.2 359.9
C3B C2B H2B C1B 180.0 180.0