PDB Chemical Component P4G
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for P4G
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C8 |
C7 |
1.532 |
1.530 |
C8 |
H81 |
1.100 |
1.091 |
C8 |
H82 |
1.100 |
1.090 |
C8 |
H83 |
1.100 |
1.090 |
C7 |
O4 |
1.438 |
1.429 |
C7 |
H71 |
1.100 |
1.090 |
C7 |
H72 |
1.100 |
1.090 |
O4 |
C6 |
1.440 |
1.429 |
C6 |
C5 |
1.537 |
1.529 |
C6 |
H61 |
1.100 |
1.090 |
C6 |
H62 |
1.100 |
1.091 |
C5 |
O3 |
1.435 |
1.429 |
C5 |
H51 |
1.101 |
1.091 |
C5 |
H52 |
1.100 |
1.090 |
O3 |
C4 |
1.424 |
1.429 |
C4 |
C3 |
1.525 |
1.529 |
C4 |
H41 |
1.099 |
1.090 |
C4 |
H42 |
1.100 |
1.091 |
C3 |
O2 |
1.432 |
1.429 |
C3 |
H31 |
1.100 |
1.091 |
C3 |
H32 |
1.100 |
1.090 |
O2 |
C2 |
1.434 |
1.429 |
C2 |
C1 |
1.534 |
1.530 |
C2 |
H21 |
1.100 |
1.090 |
C2 |
H22 |
1.100 |
1.090 |
C1 |
H11 |
1.100 |
1.090 |
C1 |
H12 |
1.100 |
1.091 |
C1 |
H13 |
1.100 |
1.090 |
Bond Angles for P4G
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C7 |
C8 |
H81 |
109.5 |
109.5 |
C7 |
C8 |
H82 |
109.5 |
109.5 |
C7 |
C8 |
H83 |
109.5 |
109.5 |
C8 |
C7 |
O4 |
111.7 |
109.5 |
C8 |
C7 |
H71 |
108.2 |
109.4 |
C8 |
C7 |
H72 |
108.7 |
109.5 |
H81 |
C8 |
H82 |
109.5 |
109.5 |
H81 |
C8 |
H83 |
109.5 |
109.5 |
H82 |
C8 |
H83 |
109.4 |
109.5 |
O4 |
C7 |
H71 |
108.3 |
109.4 |
O4 |
C7 |
H72 |
108.7 |
109.5 |
C7 |
O4 |
C6 |
113.0 |
106.8 |
H71 |
C7 |
H72 |
111.2 |
109.5 |
O4 |
C6 |
C5 |
112.0 |
109.5 |
O4 |
C6 |
H61 |
108.1 |
109.5 |
O4 |
C6 |
H62 |
108.6 |
109.5 |
C5 |
C6 |
H61 |
108.1 |
109.5 |
C5 |
C6 |
H62 |
108.6 |
109.5 |
C6 |
C5 |
O3 |
111.8 |
109.5 |
C6 |
C5 |
H51 |
108.2 |
109.5 |
C6 |
C5 |
H52 |
108.7 |
109.5 |
H61 |
C6 |
H62 |
111.5 |
109.4 |
O3 |
C5 |
H51 |
108.1 |
109.5 |
O3 |
C5 |
H52 |
108.7 |
109.5 |
C5 |
O3 |
C4 |
113.3 |
106.8 |
H51 |
C5 |
H52 |
111.3 |
109.4 |
O3 |
C4 |
C3 |
110.9 |
109.5 |
O3 |
C4 |
H41 |
108.7 |
109.5 |
O3 |
C4 |
H42 |
109.0 |
109.5 |
C3 |
C4 |
H41 |
108.7 |
109.5 |
C3 |
C4 |
H42 |
109.0 |
109.5 |
C4 |
C3 |
O2 |
109.0 |
109.5 |
C4 |
C3 |
H31 |
109.7 |
109.5 |
C4 |
C3 |
H32 |
109.7 |
109.5 |
H41 |
C4 |
H42 |
110.6 |
109.4 |
O2 |
C3 |
H31 |
109.7 |
109.5 |
O2 |
C3 |
H32 |
109.6 |
109.5 |
C3 |
O2 |
C2 |
113.3 |
106.8 |
H31 |
C3 |
H32 |
109.1 |
109.4 |
O2 |
C2 |
C1 |
110.7 |
109.5 |
O2 |
C2 |
H21 |
108.8 |
109.5 |
O2 |
C2 |
H22 |
109.1 |
109.4 |
C1 |
C2 |
H21 |
108.8 |
109.5 |
C1 |
C2 |
H22 |
109.1 |
109.4 |
C2 |
C1 |
H11 |
109.4 |
109.5 |
C2 |
C1 |
H12 |
109.5 |
109.5 |
C2 |
C1 |
H13 |
109.5 |
109.5 |
H21 |
C2 |
H22 |
110.4 |
109.5 |
H11 |
C1 |
H12 |
109.5 |
109.5 |
H11 |
C1 |
H13 |
109.5 |
109.5 |
H12 |
C1 |
H13 |
109.5 |
109.5 |
Torsion Angles for P4G
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H81 |
C8 |
C7 |
H82 |
120.0 |
240.0 |
H81 |
C8 |
C7 |
H83 |
240.0 |
120.0 |
H82 |
C8 |
C7 |
H83 |
120.0 |
240.0 |
O4 |
C7 |
C8 |
H71 |
119.1 |
240.0 |
O4 |
C7 |
C8 |
H72 |
240.0 |
120.0 |
C8 |
C7 |
O4 |
C6 |
206.4 |
180.0 |
H71 |
C7 |
C8 |
H72 |
120.9 |
240.0 |
C7 |
C8 |
H81 |
H82 |
240.0 |
120.0 |
C7 |
C8 |
H81 |
H83 |
120.0 |
240.0 |
H81 |
C8 |
C7 |
O4 |
259.2 |
300.1 |
H81 |
C8 |
C7 |
H71 |
140.1 |
60.0 |
H81 |
C8 |
C7 |
H72 |
19.2 |
180.0 |
H82 |
C8 |
H81 |
H83 |
240.0 |
120.0 |
C7 |
C8 |
H82 |
H81 |
120.0 |
240.0 |
C7 |
C8 |
H82 |
H83 |
240.0 |
120.0 |
H82 |
C8 |
C7 |
O4 |
139.2 |
60.0 |
H82 |
C8 |
C7 |
H71 |
20.1 |
180.0 |
H82 |
C8 |
C7 |
H72 |
259.2 |
300.0 |
H81 |
C8 |
H82 |
H83 |
120.0 |
240.0 |
C7 |
C8 |
H83 |
H81 |
240.0 |
120.0 |
C7 |
C8 |
H83 |
H82 |
120.0 |
240.0 |
H83 |
C8 |
C7 |
O4 |
19.2 |
180.0 |
H83 |
C8 |
C7 |
H71 |
260.1 |
300.0 |
H83 |
C8 |
C7 |
H72 |
139.2 |
60.0 |
H81 |
C8 |
H83 |
H82 |
240.0 |
120.0 |
O4 |
C7 |
C8 |
H81 |
259.2 |
300.1 |
O4 |
C7 |
C8 |
H82 |
139.2 |
60.0 |
O4 |
C7 |
C8 |
H83 |
19.2 |
180.0 |
C8 |
C7 |
O4 |
H71 |
241.0 |
120.0 |
C8 |
C7 |
O4 |
H72 |
120.0 |
240.0 |
H71 |
C7 |
O4 |
H72 |
239.0 |
120.0 |
C7 |
O4 |
C6 |
C5 |
165.2 |
180.0 |
C7 |
O4 |
C6 |
H61 |
46.3 |
300.0 |
C7 |
O4 |
C6 |
H62 |
285.2 |
60.0 |
H71 |
C7 |
C8 |
H81 |
140.1 |
60.0 |
H71 |
C7 |
C8 |
H82 |
20.1 |
180.0 |
H71 |
C7 |
C8 |
H83 |
260.1 |
300.0 |
C8 |
C7 |
H71 |
O4 |
121.2 |
240.0 |
C8 |
C7 |
H71 |
H72 |
240.6 |
120.0 |
O4 |
C7 |
H71 |
H72 |
119.4 |
240.0 |
H71 |
C7 |
O4 |
C6 |
325.5 |
60.0 |
H72 |
C7 |
C8 |
H81 |
19.2 |
180.0 |
H72 |
C7 |
C8 |
H82 |
259.2 |
300.0 |
H72 |
C7 |
C8 |
H83 |
139.2 |
60.0 |
C8 |
C7 |
H72 |
O4 |
238.2 |
120.0 |
C8 |
C7 |
H72 |
H71 |
119.1 |
240.0 |
O4 |
C7 |
H72 |
H71 |
240.9 |
120.0 |
H72 |
C7 |
O4 |
C6 |
86.4 |
300.0 |
C6 |
O4 |
C7 |
H71 |
325.5 |
60.0 |
C6 |
O4 |
C7 |
H72 |
86.4 |
300.0 |
C5 |
C6 |
O4 |
H61 |
118.9 |
240.0 |
C5 |
C6 |
O4 |
H62 |
240.0 |
120.0 |
O4 |
C6 |
C5 |
O3 |
338.8 |
65.0 |
O4 |
C6 |
C5 |
H51 |
219.8 |
185.0 |
O4 |
C6 |
C5 |
H52 |
98.8 |
305.0 |
H61 |
C6 |
O4 |
H62 |
121.1 |
240.0 |
O4 |
C6 |
C5 |
H61 |
241.1 |
120.1 |
O4 |
C6 |
C5 |
H62 |
120.0 |
240.0 |
H61 |
C6 |
C5 |
H62 |
238.9 |
119.9 |
O3 |
C5 |
C6 |
H51 |
119.0 |
240.0 |
O3 |
C5 |
C6 |
H52 |
240.0 |
120.0 |
C6 |
C5 |
O3 |
C4 |
209.9 |
180.0 |
H51 |
C5 |
C6 |
H52 |
121.0 |
240.1 |
O4 |
C6 |
H61 |
C5 |
121.4 |
240.0 |
O4 |
C6 |
H61 |
H62 |
240.7 |
120.0 |
C5 |
C6 |
H61 |
H62 |
119.3 |
240.0 |
H61 |
C6 |
C5 |
O3 |
97.8 |
304.9 |
H61 |
C6 |
C5 |
H51 |
338.8 |
65.0 |
H61 |
C6 |
C5 |
H52 |
217.8 |
184.9 |
O4 |
C6 |
H62 |
C5 |
238.0 |
120.0 |
O4 |
C6 |
H62 |
H61 |
119.0 |
240.0 |
C5 |
C6 |
H62 |
H61 |
241.0 |
120.0 |
H62 |
C6 |
C5 |
O3 |
218.8 |
185.0 |
H62 |
C6 |
C5 |
H51 |
99.9 |
305.0 |
H62 |
C6 |
C5 |
H52 |
338.9 |
65.0 |
O3 |
C5 |
C6 |
H61 |
97.8 |
304.9 |
O3 |
C5 |
C6 |
H62 |
218.8 |
185.0 |
C6 |
C5 |
O3 |
H51 |
241.0 |
120.0 |
C6 |
C5 |
O3 |
H52 |
120.0 |
240.0 |
H51 |
C5 |
O3 |
H52 |
239.0 |
119.9 |
C5 |
O3 |
C4 |
C3 |
127.1 |
180.0 |
C5 |
O3 |
C4 |
H41 |
7.7 |
300.0 |
C5 |
O3 |
C4 |
H42 |
247.1 |
60.0 |
H51 |
C5 |
C6 |
H61 |
338.8 |
65.0 |
H51 |
C5 |
C6 |
H62 |
99.9 |
305.0 |
C6 |
C5 |
H51 |
O3 |
121.3 |
240.0 |
C6 |
C5 |
H51 |
H52 |
240.6 |
120.0 |
O3 |
C5 |
H51 |
H52 |
119.4 |
240.0 |
H51 |
C5 |
O3 |
C4 |
328.9 |
60.0 |
H52 |
C5 |
C6 |
H61 |
217.8 |
184.9 |
H52 |
C5 |
C6 |
H62 |
338.9 |
65.0 |
C6 |
C5 |
H52 |
O3 |
238.1 |
120.0 |
C6 |
C5 |
H52 |
H51 |
119.1 |
240.0 |
O3 |
C5 |
H52 |
H51 |
241.0 |
120.0 |
H52 |
C5 |
O3 |
C4 |
89.9 |
300.0 |
C4 |
O3 |
C5 |
H51 |
328.9 |
60.0 |
C4 |
O3 |
C5 |
H52 |
89.9 |
300.0 |
C3 |
C4 |
O3 |
H41 |
119.4 |
240.0 |
C3 |
C4 |
O3 |
H42 |
240.0 |
120.0 |
O3 |
C4 |
C3 |
O2 |
236.7 |
65.0 |
O3 |
C4 |
C3 |
H31 |
116.5 |
185.0 |
O3 |
C4 |
C3 |
H32 |
356.7 |
304.9 |
H41 |
C4 |
O3 |
H42 |
120.6 |
240.1 |
O3 |
C4 |
C3 |
H41 |
240.6 |
120.0 |
O3 |
C4 |
C3 |
H42 |
120.0 |
240.0 |
H41 |
C4 |
C3 |
H42 |
239.4 |
119.9 |
O2 |
C3 |
C4 |
H31 |
120.2 |
240.0 |
O2 |
C3 |
C4 |
H32 |
240.0 |
120.1 |
C4 |
C3 |
O2 |
C2 |
169.7 |
180.0 |
H31 |
C3 |
C4 |
H32 |
119.8 |
240.1 |
O3 |
C4 |
H41 |
C3 |
120.8 |
240.0 |
O3 |
C4 |
H41 |
H42 |
240.4 |
120.0 |
C3 |
C4 |
H41 |
H42 |
119.6 |
240.0 |
H41 |
C4 |
C3 |
O2 |
356.1 |
305.0 |
H41 |
C4 |
C3 |
H31 |
236.0 |
65.0 |
H41 |
C4 |
C3 |
H32 |
116.1 |
184.9 |
O3 |
C4 |
H42 |
C3 |
238.9 |
120.0 |
O3 |
C4 |
H42 |
H41 |
119.4 |
240.0 |
C3 |
C4 |
H42 |
H41 |
240.6 |
120.0 |
H42 |
C4 |
C3 |
O2 |
116.7 |
185.0 |
H42 |
C4 |
C3 |
H31 |
356.5 |
305.0 |
H42 |
C4 |
C3 |
H32 |
236.7 |
65.0 |
O2 |
C3 |
C4 |
H41 |
356.1 |
305.0 |
O2 |
C3 |
C4 |
H42 |
116.7 |
185.0 |
C4 |
C3 |
O2 |
H31 |
239.8 |
120.0 |
C4 |
C3 |
O2 |
H32 |
120.0 |
240.0 |
H31 |
C3 |
O2 |
H32 |
240.2 |
120.0 |
C3 |
O2 |
C2 |
C1 |
201.3 |
180.0 |
C3 |
O2 |
C2 |
H21 |
81.8 |
300.0 |
C3 |
O2 |
C2 |
H22 |
321.3 |
60.0 |
H31 |
C3 |
C4 |
H41 |
236.0 |
65.0 |
H31 |
C3 |
C4 |
H42 |
356.5 |
305.0 |
C4 |
C3 |
H31 |
O2 |
119.8 |
240.0 |
C4 |
C3 |
H31 |
H32 |
239.8 |
120.0 |
O2 |
C3 |
H31 |
H32 |
120.1 |
240.0 |
H31 |
C3 |
O2 |
C2 |
289.9 |
60.0 |
H32 |
C3 |
C4 |
H41 |
116.1 |
184.9 |
H32 |
C3 |
C4 |
H42 |
236.7 |
65.0 |
C4 |
C3 |
H32 |
O2 |
240.4 |
120.0 |
C4 |
C3 |
H32 |
H31 |
120.2 |
240.0 |
O2 |
C3 |
H32 |
H31 |
239.9 |
120.0 |
H32 |
C3 |
O2 |
C2 |
49.7 |
300.0 |
C2 |
O2 |
C3 |
H31 |
289.9 |
60.0 |
C2 |
O2 |
C3 |
H32 |
49.7 |
300.0 |
C1 |
C2 |
O2 |
H21 |
119.5 |
240.0 |
C1 |
C2 |
O2 |
H22 |
240.0 |
120.0 |
O2 |
C2 |
C1 |
H11 |
136.1 |
180.0 |
O2 |
C2 |
C1 |
H12 |
16.1 |
300.1 |
O2 |
C2 |
C1 |
H13 |
256.1 |
60.0 |
H21 |
C2 |
O2 |
H22 |
120.5 |
240.0 |
O2 |
C2 |
C1 |
H21 |
240.5 |
120.0 |
O2 |
C2 |
C1 |
H22 |
120.0 |
240.0 |
H21 |
C2 |
C1 |
H22 |
239.5 |
120.0 |
H11 |
C1 |
C2 |
H12 |
120.0 |
240.0 |
H11 |
C1 |
C2 |
H13 |
240.0 |
120.0 |
H12 |
C1 |
C2 |
H13 |
120.0 |
240.0 |
O2 |
C2 |
H21 |
C1 |
120.7 |
240.0 |
O2 |
C2 |
H21 |
H22 |
240.3 |
120.0 |
C1 |
C2 |
H21 |
H22 |
119.7 |
240.0 |
H21 |
C2 |
C1 |
H11 |
255.6 |
60.0 |
H21 |
C2 |
C1 |
H12 |
135.6 |
180.0 |
H21 |
C2 |
C1 |
H13 |
15.6 |
300.0 |
O2 |
C2 |
H22 |
C1 |
239.0 |
120.0 |
O2 |
C2 |
H22 |
H21 |
119.5 |
240.0 |
C1 |
C2 |
H22 |
H21 |
240.5 |
120.0 |
H22 |
C2 |
C1 |
H11 |
16.1 |
300.0 |
H22 |
C2 |
C1 |
H12 |
256.1 |
60.0 |
H22 |
C2 |
C1 |
H13 |
136.1 |
180.0 |
H11 |
C1 |
C2 |
H21 |
255.6 |
60.0 |
H11 |
C1 |
C2 |
H22 |
16.1 |
300.0 |
C2 |
C1 |
H11 |
H12 |
240.0 |
120.0 |
C2 |
C1 |
H11 |
H13 |
120.0 |
240.0 |
H12 |
C1 |
H11 |
H13 |
240.0 |
120.0 |
H12 |
C1 |
C2 |
H21 |
135.6 |
180.0 |
H12 |
C1 |
C2 |
H22 |
256.1 |
60.0 |
C2 |
C1 |
H12 |
H11 |
120.0 |
240.0 |
C2 |
C1 |
H12 |
H13 |
240.0 |
120.0 |
H11 |
C1 |
H12 |
H13 |
120.0 |
240.0 |
H13 |
C1 |
C2 |
H21 |
15.6 |
300.0 |
H13 |
C1 |
C2 |
H22 |
136.1 |
180.0 |
C2 |
C1 |
H13 |
H11 |
240.0 |
120.0 |
C2 |
C1 |
H13 |
H12 |
120.0 |
240.0 |
H11 |
C1 |
H13 |
H12 |
240.0 |
120.0 |