PDB Chemical Component P4G

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for P4G

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C8 C7 1.532 1.530
C8 H81 1.100 1.091
C8 H82 1.100 1.090
C8 H83 1.100 1.090
C7 O4 1.438 1.429
C7 H71 1.100 1.090
C7 H72 1.100 1.090
O4 C6 1.440 1.429
C6 C5 1.537 1.529
C6 H61 1.100 1.090
C6 H62 1.100 1.091
C5 O3 1.435 1.429
C5 H51 1.101 1.091
C5 H52 1.100 1.090
O3 C4 1.424 1.429
C4 C3 1.525 1.529
C4 H41 1.099 1.090
C4 H42 1.100 1.091
C3 O2 1.432 1.429
C3 H31 1.100 1.091
C3 H32 1.100 1.090
O2 C2 1.434 1.429
C2 C1 1.534 1.530
C2 H21 1.100 1.090
C2 H22 1.100 1.090
C1 H11 1.100 1.090
C1 H12 1.100 1.091
C1 H13 1.100 1.090

Bond Angles for P4G

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C7 C8 H81 109.5 109.5
C7 C8 H82 109.5 109.5
C7 C8 H83 109.5 109.5
C8 C7 O4 111.7 109.5
C8 C7 H71 108.2 109.4
C8 C7 H72 108.7 109.5
H81 C8 H82 109.5 109.5
H81 C8 H83 109.5 109.5
H82 C8 H83 109.4 109.5
O4 C7 H71 108.3 109.4
O4 C7 H72 108.7 109.5
C7 O4 C6 113.0 106.8
H71 C7 H72 111.2 109.5
O4 C6 C5 112.0 109.5
O4 C6 H61 108.1 109.5
O4 C6 H62 108.6 109.5
C5 C6 H61 108.1 109.5
C5 C6 H62 108.6 109.5
C6 C5 O3 111.8 109.5
C6 C5 H51 108.2 109.5
C6 C5 H52 108.7 109.5
H61 C6 H62 111.5 109.4
O3 C5 H51 108.1 109.5
O3 C5 H52 108.7 109.5
C5 O3 C4 113.3 106.8
H51 C5 H52 111.3 109.4
O3 C4 C3 110.9 109.5
O3 C4 H41 108.7 109.5
O3 C4 H42 109.0 109.5
C3 C4 H41 108.7 109.5
C3 C4 H42 109.0 109.5
C4 C3 O2 109.0 109.5
C4 C3 H31 109.7 109.5
C4 C3 H32 109.7 109.5
H41 C4 H42 110.6 109.4
O2 C3 H31 109.7 109.5
O2 C3 H32 109.6 109.5
C3 O2 C2 113.3 106.8
H31 C3 H32 109.1 109.4
O2 C2 C1 110.7 109.5
O2 C2 H21 108.8 109.5
O2 C2 H22 109.1 109.4
C1 C2 H21 108.8 109.5
C1 C2 H22 109.1 109.4
C2 C1 H11 109.4 109.5
C2 C1 H12 109.5 109.5
C2 C1 H13 109.5 109.5
H21 C2 H22 110.4 109.5
H11 C1 H12 109.5 109.5
H11 C1 H13 109.5 109.5
H12 C1 H13 109.5 109.5

Torsion Angles for P4G

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H81 C8 C7 H82 120.0 240.0
H81 C8 C7 H83 240.0 120.0
H82 C8 C7 H83 120.0 240.0
O4 C7 C8 H71 119.1 240.0
O4 C7 C8 H72 240.0 120.0
C8 C7 O4 C6 206.4 180.0
H71 C7 C8 H72 120.9 240.0
C7 C8 H81 H82 240.0 120.0
C7 C8 H81 H83 120.0 240.0
H81 C8 C7 O4 259.2 300.1
H81 C8 C7 H71 140.1 60.0
H81 C8 C7 H72 19.2 180.0
H82 C8 H81 H83 240.0 120.0
C7 C8 H82 H81 120.0 240.0
C7 C8 H82 H83 240.0 120.0
H82 C8 C7 O4 139.2 60.0
H82 C8 C7 H71 20.1 180.0
H82 C8 C7 H72 259.2 300.0
H81 C8 H82 H83 120.0 240.0
C7 C8 H83 H81 240.0 120.0
C7 C8 H83 H82 120.0 240.0
H83 C8 C7 O4 19.2 180.0
H83 C8 C7 H71 260.1 300.0
H83 C8 C7 H72 139.2 60.0
H81 C8 H83 H82 240.0 120.0
O4 C7 C8 H81 259.2 300.1
O4 C7 C8 H82 139.2 60.0
O4 C7 C8 H83 19.2 180.0
C8 C7 O4 H71 241.0 120.0
C8 C7 O4 H72 120.0 240.0
H71 C7 O4 H72 239.0 120.0
C7 O4 C6 C5 165.2 180.0
C7 O4 C6 H61 46.3 300.0
C7 O4 C6 H62 285.2 60.0
H71 C7 C8 H81 140.1 60.0
H71 C7 C8 H82 20.1 180.0
H71 C7 C8 H83 260.1 300.0
C8 C7 H71 O4 121.2 240.0
C8 C7 H71 H72 240.6 120.0
O4 C7 H71 H72 119.4 240.0
H71 C7 O4 C6 325.5 60.0
H72 C7 C8 H81 19.2 180.0
H72 C7 C8 H82 259.2 300.0
H72 C7 C8 H83 139.2 60.0
C8 C7 H72 O4 238.2 120.0
C8 C7 H72 H71 119.1 240.0
O4 C7 H72 H71 240.9 120.0
H72 C7 O4 C6 86.4 300.0
C6 O4 C7 H71 325.5 60.0
C6 O4 C7 H72 86.4 300.0
C5 C6 O4 H61 118.9 240.0
C5 C6 O4 H62 240.0 120.0
O4 C6 C5 O3 338.8 65.0
O4 C6 C5 H51 219.8 185.0
O4 C6 C5 H52 98.8 305.0
H61 C6 O4 H62 121.1 240.0
O4 C6 C5 H61 241.1 120.1
O4 C6 C5 H62 120.0 240.0
H61 C6 C5 H62 238.9 119.9
O3 C5 C6 H51 119.0 240.0
O3 C5 C6 H52 240.0 120.0
C6 C5 O3 C4 209.9 180.0
H51 C5 C6 H52 121.0 240.1
O4 C6 H61 C5 121.4 240.0
O4 C6 H61 H62 240.7 120.0
C5 C6 H61 H62 119.3 240.0
H61 C6 C5 O3 97.8 304.9
H61 C6 C5 H51 338.8 65.0
H61 C6 C5 H52 217.8 184.9
O4 C6 H62 C5 238.0 120.0
O4 C6 H62 H61 119.0 240.0
C5 C6 H62 H61 241.0 120.0
H62 C6 C5 O3 218.8 185.0
H62 C6 C5 H51 99.9 305.0
H62 C6 C5 H52 338.9 65.0
O3 C5 C6 H61 97.8 304.9
O3 C5 C6 H62 218.8 185.0
C6 C5 O3 H51 241.0 120.0
C6 C5 O3 H52 120.0 240.0
H51 C5 O3 H52 239.0 119.9
C5 O3 C4 C3 127.1 180.0
C5 O3 C4 H41 7.7 300.0
C5 O3 C4 H42 247.1 60.0
H51 C5 C6 H61 338.8 65.0
H51 C5 C6 H62 99.9 305.0
C6 C5 H51 O3 121.3 240.0
C6 C5 H51 H52 240.6 120.0
O3 C5 H51 H52 119.4 240.0
H51 C5 O3 C4 328.9 60.0
H52 C5 C6 H61 217.8 184.9
H52 C5 C6 H62 338.9 65.0
C6 C5 H52 O3 238.1 120.0
C6 C5 H52 H51 119.1 240.0
O3 C5 H52 H51 241.0 120.0
H52 C5 O3 C4 89.9 300.0
C4 O3 C5 H51 328.9 60.0
C4 O3 C5 H52 89.9 300.0
C3 C4 O3 H41 119.4 240.0
C3 C4 O3 H42 240.0 120.0
O3 C4 C3 O2 236.7 65.0
O3 C4 C3 H31 116.5 185.0
O3 C4 C3 H32 356.7 304.9
H41 C4 O3 H42 120.6 240.1
O3 C4 C3 H41 240.6 120.0
O3 C4 C3 H42 120.0 240.0
H41 C4 C3 H42 239.4 119.9
O2 C3 C4 H31 120.2 240.0
O2 C3 C4 H32 240.0 120.1
C4 C3 O2 C2 169.7 180.0
H31 C3 C4 H32 119.8 240.1
O3 C4 H41 C3 120.8 240.0
O3 C4 H41 H42 240.4 120.0
C3 C4 H41 H42 119.6 240.0
H41 C4 C3 O2 356.1 305.0
H41 C4 C3 H31 236.0 65.0
H41 C4 C3 H32 116.1 184.9
O3 C4 H42 C3 238.9 120.0
O3 C4 H42 H41 119.4 240.0
C3 C4 H42 H41 240.6 120.0
H42 C4 C3 O2 116.7 185.0
H42 C4 C3 H31 356.5 305.0
H42 C4 C3 H32 236.7 65.0
O2 C3 C4 H41 356.1 305.0
O2 C3 C4 H42 116.7 185.0
C4 C3 O2 H31 239.8 120.0
C4 C3 O2 H32 120.0 240.0
H31 C3 O2 H32 240.2 120.0
C3 O2 C2 C1 201.3 180.0
C3 O2 C2 H21 81.8 300.0
C3 O2 C2 H22 321.3 60.0
H31 C3 C4 H41 236.0 65.0
H31 C3 C4 H42 356.5 305.0
C4 C3 H31 O2 119.8 240.0
C4 C3 H31 H32 239.8 120.0
O2 C3 H31 H32 120.1 240.0
H31 C3 O2 C2 289.9 60.0
H32 C3 C4 H41 116.1 184.9
H32 C3 C4 H42 236.7 65.0
C4 C3 H32 O2 240.4 120.0
C4 C3 H32 H31 120.2 240.0
O2 C3 H32 H31 239.9 120.0
H32 C3 O2 C2 49.7 300.0
C2 O2 C3 H31 289.9 60.0
C2 O2 C3 H32 49.7 300.0
C1 C2 O2 H21 119.5 240.0
C1 C2 O2 H22 240.0 120.0
O2 C2 C1 H11 136.1 180.0
O2 C2 C1 H12 16.1 300.1
O2 C2 C1 H13 256.1 60.0
H21 C2 O2 H22 120.5 240.0
O2 C2 C1 H21 240.5 120.0
O2 C2 C1 H22 120.0 240.0
H21 C2 C1 H22 239.5 120.0
H11 C1 C2 H12 120.0 240.0
H11 C1 C2 H13 240.0 120.0
H12 C1 C2 H13 120.0 240.0
O2 C2 H21 C1 120.7 240.0
O2 C2 H21 H22 240.3 120.0
C1 C2 H21 H22 119.7 240.0
H21 C2 C1 H11 255.6 60.0
H21 C2 C1 H12 135.6 180.0
H21 C2 C1 H13 15.6 300.0
O2 C2 H22 C1 239.0 120.0
O2 C2 H22 H21 119.5 240.0
C1 C2 H22 H21 240.5 120.0
H22 C2 C1 H11 16.1 300.0
H22 C2 C1 H12 256.1 60.0
H22 C2 C1 H13 136.1 180.0
H11 C1 C2 H21 255.6 60.0
H11 C1 C2 H22 16.1 300.0
C2 C1 H11 H12 240.0 120.0
C2 C1 H11 H13 120.0 240.0
H12 C1 H11 H13 240.0 120.0
H12 C1 C2 H21 135.6 180.0
H12 C1 C2 H22 256.1 60.0
C2 C1 H12 H11 120.0 240.0
C2 C1 H12 H13 240.0 120.0
H11 C1 H12 H13 120.0 240.0
H13 C1 C2 H21 15.6 300.0
H13 C1 C2 H22 136.1 180.0
C2 C1 H13 H11 240.0 120.0
C2 C1 H13 H12 120.0 240.0
H11 C1 H13 H12 240.0 120.0