PDB Chemical Component P4C

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for P4C

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C2 1.428 1.428
O1 HO1 0.950 0.967
C2 C3 1.445 1.529
C2 H21A 1.115 1.090
C2 H22 1.115 1.090
C3 O4 1.558 1.429
C3 H31 1.114 1.090
C3 H32 1.115 1.090
O4 C5 1.432 1.429
C5 C6 1.420 1.530
C5 H51 1.115 1.091
C5 H52 1.116 1.090
C6 O7 1.528 1.429
C6 H61 1.116 1.090
C6 H62 1.114 1.090
O7 C8 1.433 1.429
C8 C9 1.465 1.529
C8 H81 1.114 1.090
C8 H82 1.116 1.090
C9 O10 1.603 1.429
C9 H91 1.115 1.089
C9 H92 1.114 1.090
O10 C11 1.440 1.429
C11 C12 1.438 1.528
C11 H111 1.115 1.089
C11 H112 1.114 1.090
C12 O13 1.566 1.429
C12 H121 1.115 1.090
C12 H122 1.115 1.089
O13 C14 1.439 1.429
C14 C15 1.423 1.529
C14 H141 1.114 1.091
C14 H142 1.115 1.090
C15 O16 1.556 1.429
C15 H151 1.115 1.089
C15 H152 1.115 1.090
O16 C17 1.431 1.430
C17 C18 1.430 1.530
C17 H171 1.114 1.090
C17 H172 1.115 1.090
C18 O19 1.578 1.429
C18 H181 1.115 1.091
C18 H182 1.115 1.089
O19 C20 1.460 1.428
C20 C21 1.469 1.507
C20 H201 1.116 1.090
C20 H202 1.115 1.090
C21 O22 0.896 1.207
C21 H21 1.102 1.081

Bond Angles for P4C

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 O1 HO1 131.1 106.8
O1 C2 C3 131.1 109.5
O1 C2 H21A 104.7 109.4
O1 C2 H22 104.8 109.4
C3 C2 H21A 104.7 109.5
C3 C2 H22 104.7 109.5
C2 C3 O4 114.8 109.5
C2 C3 H31 110.3 109.4
C2 C3 H32 110.3 109.5
H21A C2 H22 104.2 109.5
O4 C3 H31 110.3 109.5
O4 C3 H32 110.3 109.5
C3 O4 C5 113.7 106.8
H31 C3 H32 100.0 109.5
O4 C5 C6 105.9 109.5
O4 C5 H51 113.6 109.5
O4 C5 H52 113.6 109.5
C6 C5 H51 113.5 109.4
C6 C5 H52 113.5 109.5
C5 C6 O7 116.9 109.5
C5 C6 H61 109.5 109.4
C5 C6 H62 109.5 109.4
H51 C5 H52 96.9 109.5
O7 C6 H61 109.5 109.5
O7 C6 H62 109.5 109.5
C6 O7 C8 112.4 106.8
H61 C6 H62 100.7 109.5
O7 C8 C9 110.2 109.5
O7 C8 H81 112.0 109.5
O7 C8 H82 111.9 109.4
C9 C8 H81 111.9 109.5
C9 C8 H82 111.9 109.4
C8 C9 O10 115.3 109.5
C8 C9 H91 110.1 109.5
C8 C9 H92 110.1 109.5
H81 C8 H82 98.5 109.5
O10 C9 H91 110.1 109.5
O10 C9 H92 110.1 109.4
C9 O10 C11 116.9 106.8
H91 C9 H92 100.2 109.5
O10 C11 C12 109.8 109.5
O10 C11 H111 112.1 109.4
O10 C11 H112 112.1 109.5
C12 C11 H111 112.1 109.5
C12 C11 H112 112.1 109.5
C11 C12 O13 116.8 109.5
C11 C12 H121 109.6 109.5
C11 C12 H122 109.5 109.5
H111 C11 H112 98.3 109.4
O13 C12 H121 109.5 109.5
O13 C12 H122 109.5 109.4
C12 O13 C14 116.1 106.8
H121 C12 H122 100.6 109.5
O13 C14 C15 109.5 109.5
O13 C14 H141 112.2 109.4
O13 C14 H142 112.2 109.4
C15 C14 H141 112.2 109.5
C15 C14 H142 112.2 109.5
C14 C15 O16 112.7 109.5
C14 C15 H151 111.0 109.6
C14 C15 H152 111.0 109.4
H141 C14 H142 98.2 109.5
O16 C15 H151 111.0 109.5
O16 C15 H152 111.0 109.4
C15 O16 C17 115.4 106.8
H151 C15 H152 99.3 109.4
O16 C17 C18 108.8 109.4
O16 C17 H171 112.4 109.4
O16 C17 H172 112.4 109.4
C18 C17 H171 112.5 109.5
C18 C17 H172 112.5 109.5
C17 C18 O19 112.7 109.5
C17 C18 H181 111.0 109.4
C17 C18 H182 111.0 109.5
H171 C17 H172 98.0 109.5
O19 C18 H181 111.0 109.5
O19 C18 H182 111.0 109.5
C18 O19 C20 115.2 106.8
H181 C18 H182 99.4 109.5
O19 C20 C21 116.6 109.5
O19 C20 H201 109.6 109.5
O19 C20 H202 109.6 109.4
C21 C20 H201 109.6 109.4
C21 C20 H202 109.6 109.4
C20 C21 O22 120.3 120.0
C20 C21 H21 142.7 119.9
H201 C20 H202 100.5 109.5
O22 C21 H21 97.0 120.0

Torsion Angles for P4C

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C2 O1 H21A 234.7 240.0
C3 C2 O1 H22 125.3 120.0
O1 C2 C3 O4 204.4 60.0
O1 C2 C3 H31 329.7 180.0
O1 C2 C3 H32 79.2 299.9
H21A C2 O1 H22 250.6 240.0
HO1 O1 C2 C3 180.0 180.0
HO1 O1 C2 H21A 305.3 300.0
HO1 O1 C2 H22 54.7 60.0
C3 C2 O1 HO1 180.0 180.0
O1 C2 C3 H21A 125.3 119.9
O1 C2 C3 H22 234.7 240.0
H21A C2 C3 H22 109.4 120.0
O4 C3 C2 H31 234.7 240.0
O4 C3 C2 H32 125.2 120.0
C2 C3 O4 C5 241.4 180.0
H31 C3 C2 H32 250.5 240.0
H21A C2 O1 HO1 305.3 300.0
O1 C2 H21A C3 219.5 240.0
O1 C2 H21A H22 109.8 120.0
C3 C2 H21A H22 250.3 240.0
H21A C2 C3 O4 79.1 300.0
H21A C2 C3 H31 204.4 60.0
H21A C2 C3 H32 313.9 180.0
H22 C2 O1 HO1 54.7 60.0
O1 C2 H22 C3 140.6 120.0
O1 C2 H22 H21A 250.2 240.1
C3 C2 H22 H21A 109.7 120.0
H22 C2 C3 O4 329.7 180.0
H22 C2 C3 H31 95.0 300.0
H22 C2 C3 H32 204.5 60.0
O4 C3 C2 H21A 79.1 300.0
O4 C3 C2 H22 329.7 180.0
C2 C3 O4 H31 125.3 120.0
C2 C3 O4 H32 234.8 240.0
H31 C3 O4 H32 109.5 120.0
C3 O4 C5 C6 168.8 180.1
C3 O4 C5 H51 294.1 300.0
C3 O4 C5 H52 43.5 60.0
H31 C3 C2 H21A 204.4 60.0
H31 C3 C2 H22 95.0 300.0
C2 C3 H31 O4 232.2 240.0
C2 C3 H31 H32 116.1 120.0
O4 C3 H31 H32 243.9 240.0
H31 C3 O4 C5 116.1 60.1
H32 C3 C2 H21A 313.9 180.0
H32 C3 C2 H22 204.5 60.0
C2 C3 H32 O4 127.8 120.0
C2 C3 H32 H31 243.9 240.0
O4 C3 H32 H31 116.1 120.0
H32 C3 O4 C5 6.7 300.0
C5 O4 C3 H31 116.1 60.1
C5 O4 C3 H32 6.7 300.0
C6 C5 O4 H51 234.7 240.1
C6 C5 O4 H52 125.3 120.0
O4 C5 C6 O7 137.1 60.0
O4 C5 C6 H61 262.3 180.0
O4 C5 C6 H62 11.8 300.0
H51 C5 O4 H52 250.5 240.0
O4 C5 C6 H51 125.3 120.0
O4 C5 C6 H52 234.7 240.0
H51 C5 C6 H52 109.4 120.0
O7 C6 C5 H61 234.8 240.0
O7 C6 C5 H62 125.2 120.0
C5 C6 O7 C8 58.1 180.0
H61 C6 C5 H62 250.5 240.0
O4 C5 H51 C6 238.9 240.0
O4 C5 H51 H52 119.5 120.0
C6 C5 H51 H52 240.6 240.0
H51 C5 C6 O7 11.8 300.0
H51 C5 C6 H61 137.0 60.0
H51 C5 C6 H62 246.5 180.0
O4 C5 H52 C6 121.1 120.0
O4 C5 H52 H51 240.5 240.0
C6 C5 H52 H51 119.4 120.0
H52 C5 C6 O7 262.3 180.0
H52 C5 C6 H61 27.6 300.1
H52 C5 C6 H62 137.1 60.0
O7 C6 C5 H51 11.8 300.0
O7 C6 C5 H52 262.3 180.0
C5 C6 O7 H61 125.3 120.0
C5 C6 O7 H62 234.7 240.0
H61 C6 O7 H62 109.5 120.1
C6 O7 C8 C9 171.2 180.0
C6 O7 C8 H81 296.5 300.0
C6 O7 C8 H82 46.0 60.0
H61 C6 C5 H51 137.0 60.0
H61 C6 C5 H52 27.6 300.1
C5 C6 H61 O7 230.6 240.0
C5 C6 H61 H62 115.3 119.9
O7 C6 H61 H62 244.7 239.9
H61 C6 O7 C8 292.9 60.0
H62 C6 C5 H51 246.5 180.0
H62 C6 C5 H52 137.1 60.0
C5 C6 H62 O7 129.4 120.0
C5 C6 H62 H61 244.7 240.1
O7 C6 H62 H61 115.3 120.1
H62 C6 O7 C8 183.4 299.9
C8 O7 C6 H61 292.9 60.0
C8 O7 C6 H62 183.4 299.9
C9 C8 O7 H81 234.7 240.0
C9 C8 O7 H82 125.2 119.9
O7 C8 C9 O10 232.2 60.0
O7 C8 C9 H91 357.5 180.0
O7 C8 C9 H92 107.0 300.1
H81 C8 O7 H82 250.5 240.0
O7 C8 C9 H81 125.3 120.1
O7 C8 C9 H82 234.7 240.0
H81 C8 C9 H82 109.5 120.0
O10 C9 C8 H91 234.8 240.0
O10 C9 C8 H92 125.2 120.0
C8 C9 O10 C11 87.8 180.0
H91 C9 C8 H92 250.5 240.0
O7 C8 H81 C9 235.7 240.0
O7 C8 H81 H82 117.9 120.0
C9 C8 H81 H82 242.2 240.0
H81 C8 C9 O10 107.0 300.0
H81 C8 C9 H91 232.2 60.0
H81 C8 C9 H92 341.7 180.0
O7 C8 H82 C9 124.3 120.0
O7 C8 H82 H81 242.1 240.0
C9 C8 H82 H81 117.8 120.0
H82 C8 C9 O10 357.5 180.0
H82 C8 C9 H91 122.7 300.0
H82 C8 C9 H92 232.3 60.0
O10 C9 C8 H81 107.0 300.0
O10 C9 C8 H82 357.5 180.0
C8 C9 O10 H91 125.2 120.0
C8 C9 O10 H92 234.8 240.0
H91 C9 O10 H92 109.6 120.0
C9 O10 C11 C12 180.3 180.0
C9 O10 C11 H111 305.5 300.0
C9 O10 C11 H112 55.0 60.0
H91 C9 C8 H81 232.2 60.0
H91 C9 C8 H82 122.7 300.0
C8 C9 H91 O10 231.9 240.0
C8 C9 H91 H92 115.9 120.0
O10 C9 H91 H92 244.0 240.0
H91 C9 O10 C11 322.6 60.0
H92 C9 C8 H81 341.7 180.0
H92 C9 C8 H82 232.3 60.0
C8 C9 H92 O10 128.1 120.0
C8 C9 H92 H91 244.1 240.0
O10 C9 H92 H91 116.0 120.0
H92 C9 O10 C11 213.1 300.0
C11 O10 C9 H91 322.6 60.0
C11 O10 C9 H92 213.1 300.0
C12 C11 O10 H111 234.8 240.0
C12 C11 O10 H112 125.3 120.0
O10 C11 C12 O13 99.8 59.9
O10 C11 C12 H121 225.1 180.0
O10 C11 C12 H122 334.6 300.0
H111 C11 O10 H112 250.5 240.1
O10 C11 C12 H111 125.2 120.0
O10 C11 C12 H112 234.7 240.0
H111 C11 C12 H112 109.5 120.0
O13 C12 C11 H121 234.7 240.0
O13 C12 C11 H122 125.2 119.9
C11 C12 O13 C14 125.7 180.0
H121 C12 C11 H122 250.5 240.0
O10 C11 H111 C12 236.0 240.0
O10 C11 H111 H112 118.0 120.0
C12 C11 H111 H112 242.0 240.0
H111 C11 C12 O13 334.6 299.9
H111 C11 C12 H121 99.8 60.0
H111 C11 C12 H122 209.3 180.0
O10 C11 H112 C12 124.0 120.1
O10 C11 H112 H111 242.0 240.1
C12 C11 H112 H111 118.0 120.0
H112 C11 C12 O13 225.1 180.0
H112 C11 C12 H121 350.4 300.0
H112 C11 C12 H122 99.9 60.0
O13 C12 C11 H111 334.6 299.9
O13 C12 C11 H112 225.1 180.0
C11 C12 O13 H121 125.3 120.0
C11 C12 O13 H122 234.8 240.0
H121 C12 O13 H122 109.5 120.0
C12 O13 C14 C15 237.9 180.1
C12 O13 C14 H141 3.2 300.1
C12 O13 C14 H142 112.6 60.0
H121 C12 C11 H111 99.8 60.0
H121 C12 C11 H112 350.4 300.0
C11 C12 H121 O13 230.6 240.0
C11 C12 H121 H122 115.3 120.0
O13 C12 H121 H122 244.7 240.1
H121 C12 O13 C14 0.4 60.0
H122 C12 C11 H111 209.3 180.0
H122 C12 C11 H112 99.9 60.0
C11 C12 H122 O13 129.4 120.0
C11 C12 H122 H121 244.7 240.0
O13 C12 H122 H121 115.3 120.0
H122 C12 O13 C14 250.9 300.0
C14 O13 C12 H121 0.4 60.0
C14 O13 C12 H122 250.9 300.0
C15 C14 O13 H141 234.7 240.0
C15 C14 O13 H142 125.2 120.0
O13 C14 C15 O16 358.7 60.0
O13 C14 C15 H151 124.1 180.0
O13 C14 C15 H152 233.5 300.0
H141 C14 O13 H142 250.5 240.0
O13 C14 C15 H141 125.3 120.0
O13 C14 C15 H142 234.7 240.0
H141 C14 C15 H142 109.4 120.0
O16 C15 C14 H151 234.7 239.9
O16 C15 C14 H152 125.2 119.9
C14 C15 O16 C17 98.4 180.1
H151 C15 C14 H152 250.5 240.0
O13 C14 H141 C15 236.2 240.0
O13 C14 H141 H142 118.1 119.9
C15 C14 H141 H142 241.9 240.0
H141 C14 C15 O16 233.5 300.0
H141 C14 C15 H151 358.8 60.1
H141 C14 C15 H152 108.2 180.1
O13 C14 H142 C15 123.8 120.0
O13 C14 H142 H141 241.9 240.1
C15 C14 H142 H141 118.1 120.0
H142 C14 C15 O16 124.0 180.0
H142 C14 C15 H151 249.3 300.0
H142 C14 C15 H152 358.8 60.0
O16 C15 C14 H141 233.5 300.0
O16 C15 C14 H142 124.0 180.0
C14 C15 O16 H151 125.3 120.1
C14 C15 O16 H152 234.7 240.0
H151 C15 O16 H152 109.4 119.9
C15 O16 C17 C18 116.6 180.0
C15 O16 C17 H171 241.9 300.0
C15 O16 C17 H172 351.4 60.0
H151 C15 C14 H141 358.8 60.1
H151 C15 C14 H142 249.3 300.0
C14 C15 H151 O16 233.8 239.9
C14 C15 H151 H152 116.9 120.0
O16 C15 H151 H152 243.2 240.1
H151 C15 O16 C17 333.1 59.9
H152 C15 C14 H141 108.2 180.1
H152 C15 C14 H142 358.8 60.0
C14 C15 H152 O16 126.2 120.0
C14 C15 H152 H151 243.1 239.9
O16 C15 H152 H151 116.9 119.9
H152 C15 O16 C17 223.6 300.0
C17 O16 C15 H151 333.1 59.9
C17 O16 C15 H152 223.6 300.0
C18 C17 O16 H171 234.7 240.0
C18 C17 O16 H172 125.3 120.0
O16 C17 C18 O19 308.6 60.0
O16 C17 C18 H181 73.8 180.0
O16 C17 C18 H182 183.3 300.0
H171 C17 O16 H172 250.5 240.0
O16 C17 C18 H171 125.2 119.9
O16 C17 C18 H172 234.7 240.0
H171 C17 C18 H172 109.5 120.1
O19 C18 C17 H181 234.8 240.1
O19 C18 C17 H182 125.2 120.0
C17 C18 O19 C20 109.7 179.9
H181 C18 C17 H182 250.5 240.0
O16 C17 H171 C18 236.8 240.1
O16 C17 H171 H172 118.4 120.0
C18 C17 H171 H172 241.6 239.9
H171 C17 C18 O19 183.3 300.1
H171 C17 C18 H181 308.6 60.0
H171 C17 C18 H182 58.1 180.0
O16 C17 H172 C18 123.2 120.0
O16 C17 H172 H171 241.7 240.0
C18 C17 H172 H171 118.4 120.1
H172 C17 C18 O19 73.8 180.0
H172 C17 C18 H181 199.1 299.9
H172 C17 C18 H182 308.6 59.9
O19 C18 C17 H171 183.3 300.1
O19 C18 C17 H172 73.8 180.0
C17 C18 O19 H181 125.3 119.9
C17 C18 O19 H182 234.8 240.0
H181 C18 O19 H182 109.5 120.1
C18 O19 C20 C21 77.9 180.0
C18 O19 C20 H201 203.2 300.0
C18 O19 C20 H202 312.6 60.0
H181 C18 C17 H171 308.6 60.0
H181 C18 C17 H172 199.1 299.9
C17 C18 H181 O19 233.8 240.0
C17 C18 H181 H182 116.9 120.0
O19 C18 H181 H182 243.1 239.9
H181 C18 O19 C20 344.4 60.0
H182 C18 C17 H171 58.1 180.0
H182 C18 C17 H172 308.6 59.9
C17 C18 H182 O19 126.2 120.0
C17 C18 H182 H181 243.1 240.1
O19 C18 H182 H181 116.9 120.0
H182 C18 O19 C20 234.9 299.9
C20 O19 C18 H181 344.4 60.0
C20 O19 C18 H182 234.9 299.9
C21 C20 O19 H201 234.7 240.0
C21 C20 O19 H202 125.3 120.0
O19 C20 C21 O22 144.0 120.0
O19 C20 C21 H21 324.0 300.0
H201 C20 O19 H202 250.6 240.0
O19 C20 C21 H201 125.3 120.1
O19 C20 C21 H202 234.7 240.0
H201 C20 C21 H202 109.5 119.9
O22 C21 C20 H21 180.0 180.0
O19 C20 H201 C21 230.8 239.9
O19 C20 H201 H202 115.4 120.0
C21 C20 H201 H202 244.6 240.1
H201 C20 C21 O22 18.7 359.9
H201 C20 C21 H21 198.7 180.0
O19 C20 H202 C21 129.2 120.0
O19 C20 H202 H201 244.6 239.9
C21 C20 H202 H201 115.4 119.9
H202 C20 C21 O22 269.3 240.0
H202 C20 C21 H21 89.3 60.0
O22 C21 C20 H201 18.7 359.9
O22 C21 C20 H202 269.3 240.0
C20 C21 O22 H21 180.0 180.0
H21 C21 C20 H201 198.7 180.0
H21 C21 C20 H202 89.3 60.0
C20 C21 H21 O22 180.0 180.0