PDB Chemical Component P3G

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for P3G

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C5 C6 1.516 1.530
C5 H51 1.059 1.089
C5 H5 1.115 1.090
C5 H52 1.060 1.090
C6 O3 1.431 1.428
C6 H61 1.093 1.090
C6 H62 1.092 1.091
O3 C7 1.428 1.429
C7 C8 1.526 1.531
C7 H71 1.092 1.090
C7 H72 1.092 1.090
C8 O4 1.436 1.428
C8 H81 1.092 1.090
C8 H82 1.092 1.089
O4 C9 1.431 1.429
C9 C10 1.523 1.531
C9 H91 1.091 1.089
C9 H92 1.091 1.091
C10 O5 1.434 1.428
C10 H101 1.092 1.091
C10 H102 1.092 1.090
O5 C11 1.427 1.429
C11 C12 1.527 1.531
C11 H111 1.091 1.089
C11 H112 1.092 1.090
C12 O6 1.428 1.429
C12 H121 1.092 1.090
C12 H122 1.093 1.089
O6 C13 1.436 1.429
C13 C14 1.527 1.530
C13 H131 1.092 1.090
C13 H132 1.092 1.090
C14 O7 1.425 1.429
C14 H141 1.082 1.090
C14 H142 1.085 1.090
O7 C15 1.435 1.429
C15 C16 1.513 1.530
C15 H151 1.092 1.090
C15 H152 1.092 1.090
C16 H16 1.114 1.090
C16 H162 1.059 1.090
C16 H161 1.060 1.090

Bond Angles for P3G

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C6 C5 H51 109.5 109.5
C6 C5 H5 112.1 109.5
C6 C5 H52 109.4 109.4
C5 C6 O3 109.8 109.5
C5 C6 H61 109.5 109.5
C5 C6 H62 109.6 109.5
H51 C5 H5 80.8 109.5
H51 C5 H52 109.5 109.4
H5 C5 H52 30.2 109.5
O3 C6 H61 110.5 109.6
O3 C6 H62 109.6 109.4
C6 O3 C7 113.5 106.7
H61 C6 H62 107.9 109.4
O3 C7 C8 110.2 109.4
O3 C7 H71 109.7 109.5
O3 C7 H72 109.7 109.5
C8 C7 H71 109.7 109.4
C8 C7 H72 109.5 109.5
C7 C8 O4 110.5 109.4
C7 C8 H81 109.4 109.4
C7 C8 H82 109.0 109.5
H71 C7 H72 108.0 109.5
O4 C8 H81 109.4 109.5
O4 C8 H82 110.4 109.5
C8 O4 C9 113.3 106.8
H81 C8 H82 107.9 109.5
O4 C9 C10 112.3 109.5
O4 C9 H91 109.9 109.5
O4 C9 H92 108.9 109.4
C10 C9 H91 108.6 109.5
C10 C9 H92 109.0 109.4
C9 C10 O5 109.8 109.5
C9 C10 H101 109.8 109.4
C9 C10 H102 109.6 109.5
H91 C9 H92 108.0 109.5
O5 C10 H101 110.0 109.5
O5 C10 H102 109.5 109.5
C10 O5 C11 113.9 106.7
H101 C10 H102 108.0 109.4
O5 C11 C12 111.7 109.4
O5 C11 H111 110.3 109.5
O5 C11 H112 108.9 109.5
C12 C11 H111 109.5 109.5
C12 C11 H112 108.9 109.4
C11 C12 O6 110.6 109.5
C11 C12 H121 108.8 109.4
C11 C12 H122 109.4 109.5
H111 C11 H112 107.4 109.5
O6 C12 H121 110.7 109.5
O6 C12 H122 109.4 109.5
C12 O6 C13 116.9 106.7
H121 C12 H122 107.8 109.5
O6 C13 C14 107.3 109.4
O6 C13 H131 111.5 109.5
O6 C13 H132 109.8 109.6
C14 C13 H131 110.0 109.5
C14 C13 H132 109.9 109.4
C13 C14 O7 113.5 109.5
C13 C14 H141 108.2 109.4
C13 C14 H142 109.4 109.5
H131 C13 H132 108.2 109.4
O7 C14 H141 108.7 109.5
O7 C14 H142 109.8 109.5
C14 O7 C15 113.2 106.8
H141 C14 H142 107.1 109.4
O7 C15 C16 110.7 109.5
O7 C15 H151 109.2 109.4
O7 C15 H152 110.4 109.5
C16 C15 H151 109.2 109.5
C16 C15 H152 109.6 109.5
C15 C16 H16 110.7 109.5
C15 C16 H162 109.5 109.5
C15 C16 H161 109.5 109.5
H151 C15 H152 107.7 109.5
H16 C16 H162 71.5 109.5
H16 C16 H161 40.3 109.4
H162 C16 H161 109.5 109.5

Torsion Angles for P3G

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H51 C5 C6 H5 87.8 239.9
H51 C5 C6 H52 120.0 119.9
H5 C5 C6 H52 32.2 240.0
O3 C6 C5 H61 121.4 120.1
O3 C6 C5 H62 239.6 240.0
C5 C6 O3 C7 226.0 180.0
H61 C6 C5 H62 118.2 119.9
C6 C5 H51 H5 249.7 120.1
C6 C5 H51 H52 240.0 240.1
H51 C5 C6 O3 33.1 180.0
H51 C5 C6 H61 271.7 59.9
H51 C5 C6 H62 153.5 300.0
H5 C5 H51 H52 350.3 120.0
C6 C5 H5 H51 107.4 239.9
C6 C5 H5 H52 269.1 120.0
H5 C5 C6 O3 305.3 300.1
H5 C5 C6 H61 183.9 180.0
H5 C5 C6 H62 65.7 60.1
H51 C5 H5 H52 161.6 240.0
C6 C5 H52 H51 120.0 120.0
C6 C5 H52 H5 100.8 240.0
H52 C5 C6 O3 273.1 60.1
H52 C5 C6 H61 151.7 300.0
H52 C5 C6 H62 33.5 180.0
H51 C5 H52 H5 340.7 120.0
O3 C6 C5 H51 33.1 180.0
O3 C6 C5 H5 305.3 300.1
O3 C6 C5 H52 273.1 60.1
C5 C6 O3 H61 239.2 240.0
C5 C6 O3 H62 120.4 120.0
H61 C6 O3 H62 241.2 240.0
C6 O3 C7 C8 183.4 179.9
C6 O3 C7 H71 304.3 60.0
C6 O3 C7 H72 62.8 299.9
H61 C6 C5 H51 271.7 59.9
H61 C6 C5 H5 183.9 180.0
H61 C6 C5 H52 151.7 300.0
C5 C6 H61 O3 121.0 120.0
C5 C6 H61 H62 240.8 240.1
O3 C6 H61 H62 119.8 120.0
H61 C6 O3 C7 346.8 300.0
H62 C6 C5 H51 153.5 300.0
H62 C6 C5 H5 65.7 60.1
H62 C6 C5 H52 33.5 180.0
C5 C6 H62 O3 239.5 240.0
C5 C6 H62 H61 119.1 120.0
O3 C6 H62 H61 239.7 239.9
H62 C6 O3 C7 105.6 60.0
C7 O3 C6 H61 346.8 300.0
C7 O3 C6 H62 105.6 60.0
C8 C7 O3 H71 239.1 120.0
C8 C7 O3 H72 120.7 240.0
O3 C7 C8 O4 210.9 60.0
O3 C7 C8 H81 90.3 300.0
O3 C7 C8 H82 332.5 180.0
H71 C7 O3 H72 241.5 120.1
O3 C7 C8 H71 120.9 240.0
O3 C7 C8 H72 239.2 120.0
H71 C7 C8 H72 118.4 240.0
O4 C8 C7 H81 120.6 120.0
O4 C8 C7 H82 238.4 240.0
C7 C8 O4 C9 149.7 180.0
H81 C8 C7 H82 117.8 120.0
O3 C7 H71 C8 238.8 120.0
O3 C7 H71 H72 119.5 239.9
C8 C7 H71 H72 240.7 120.0
H71 C7 C8 O4 90.0 180.0
H71 C7 C8 H81 329.5 60.0
H71 C7 C8 H82 211.6 300.0
O3 C7 H72 C8 121.1 240.0
O3 C7 H72 H71 240.5 120.1
C8 C7 H72 H71 119.4 240.0
H72 C7 C8 O4 331.7 300.0
H72 C7 C8 H81 211.1 180.0
H72 C7 C8 H82 93.3 60.0
O4 C8 C7 H71 90.0 180.0
O4 C8 C7 H72 331.7 300.0
C7 C8 O4 H81 239.4 240.0
C7 C8 O4 H82 120.7 120.0
H81 C8 O4 H82 241.3 239.9
C8 O4 C9 C10 146.7 180.0
C8 O4 C9 H91 25.7 59.9
C8 O4 C9 H92 267.6 299.9
H81 C8 C7 H71 329.5 60.0
H81 C8 C7 H72 211.1 180.0
C7 C8 H81 O4 121.3 120.0
C7 C8 H81 H82 241.5 240.0
O4 C8 H81 H82 120.2 120.0
H81 C8 O4 C9 270.3 300.0
H82 C8 C7 H71 211.6 300.0
H82 C8 C7 H72 93.3 60.0
C7 C8 H82 O4 238.4 240.1
C7 C8 H82 H81 118.8 120.0
O4 C8 H82 H81 240.4 239.9
H82 C8 O4 C9 28.9 60.1
C9 O4 C8 H81 270.3 300.0
C9 O4 C8 H82 28.9 60.1
C10 C9 O4 H91 121.0 120.1
C10 C9 O4 H92 239.2 240.1
O4 C9 C10 O5 212.8 59.9
O4 C9 C10 H101 91.7 299.9
O4 C9 C10 H102 333.2 180.0
H91 C9 O4 H92 118.1 120.0
O4 C9 C10 H91 238.2 239.9
O4 C9 C10 H92 120.8 119.9
H91 C9 C10 H92 242.6 240.0
O5 C10 C9 H101 121.1 120.0
O5 C10 C9 H102 239.6 239.9
C9 C10 O5 C11 277.1 180.0
H101 C10 C9 H102 118.5 119.9
O4 C9 H91 C10 123.2 120.0
O4 C9 H91 H92 241.3 240.0
C10 C9 H91 H92 118.1 120.0
H91 C9 C10 O5 334.6 180.0
H91 C9 C10 H101 213.5 60.0
H91 C9 C10 H102 95.0 300.1
O4 C9 H92 C10 237.1 240.1
O4 C9 H92 H91 119.3 120.0
C10 C9 H92 H91 242.2 240.0
H92 C9 C10 O5 92.0 300.0
H92 C9 C10 H101 330.9 180.0
H92 C9 C10 H102 212.4 60.1
O5 C10 C9 H91 334.6 180.0
O5 C10 C9 H92 92.0 300.0
C9 C10 O5 H101 239.0 240.0
C9 C10 O5 H102 120.5 120.0
H101 C10 O5 H102 241.4 240.0
C10 O5 C11 C12 162.6 180.0
C10 O5 C11 H111 40.6 60.0
C10 O5 C11 H112 283.0 299.9
H101 C10 C9 H91 213.5 60.0
H101 C10 C9 H92 330.9 180.0
C9 C10 H101 O5 121.0 120.0
C9 C10 H101 H102 240.5 240.1
O5 C10 H101 H102 119.5 120.1
H101 C10 O5 C11 38.1 300.0
H102 C10 C9 H91 95.0 300.1
H102 C10 C9 H92 212.4 60.1
C9 C10 H102 O5 239.4 240.0
C9 C10 H102 H101 119.6 119.9
O5 C10 H102 H101 240.2 239.9
H102 C10 O5 C11 156.7 60.0
C11 O5 C10 H101 38.1 300.0
C11 O5 C10 H102 156.7 60.0
C12 C11 O5 H111 122.0 120.0
C12 C11 O5 H112 239.6 240.1
O5 C11 C12 O6 309.8 59.9
O5 C11 C12 H121 187.9 300.0
O5 C11 C12 H122 70.3 180.0
H111 C11 O5 H112 117.6 120.1
O5 C11 C12 H111 237.5 240.0
O5 C11 C12 H112 120.4 119.9
H111 C11 C12 H112 242.9 240.0
O6 C12 C11 H121 121.9 120.0
O6 C12 C11 H122 239.4 239.9
C11 C12 O6 C13 219.3 180.0
H121 C12 C11 H122 117.6 120.0
O5 C11 H111 C12 123.3 120.0
O5 C11 H111 H112 241.4 239.9
C12 C11 H111 H112 118.1 119.9
H111 C11 C12 O6 72.3 180.0
H111 C11 C12 H121 310.4 60.0
H111 C11 C12 H122 192.8 300.0
O5 C11 H112 C12 237.9 240.1
O5 C11 H112 H111 119.5 120.1
C12 C11 H112 H111 241.5 240.0
H112 C11 C12 O6 189.4 300.0
H112 C11 C12 H121 67.5 180.0
H112 C11 C12 H122 310.0 60.1
O6 C12 C11 H111 72.3 180.0
O6 C12 C11 H112 189.4 300.0
C11 C12 O6 H121 239.2 240.1
C11 C12 O6 H122 120.6 120.0
H121 C12 O6 H122 241.3 240.0
C12 O6 C13 C14 125.4 180.0
C12 O6 C13 H131 4.8 60.0
C12 O6 C13 H132 244.8 300.0
H121 C12 C11 H111 310.4 60.0
H121 C12 C11 H112 67.5 180.0
C11 C12 H121 O6 121.8 120.0
C11 C12 H121 H122 241.4 240.0
O6 C12 H121 H122 119.6 120.1
H121 C12 O6 C13 340.1 299.9
H122 C12 C11 H111 192.8 300.0
H122 C12 C11 H112 310.0 60.1
C11 C12 H122 O6 238.7 240.0
C11 C12 H122 H121 118.2 119.9
O6 C12 H122 H121 239.5 240.0
H122 C12 O6 C13 98.8 60.0
C13 O6 C12 H121 340.1 299.9
C13 O6 C12 H122 98.8 60.0
C14 C13 O6 H131 120.6 120.0
C14 C13 O6 H132 240.6 240.0
O6 C13 C14 O7 134.1 60.0
O6 C13 C14 H141 13.4 300.0
O6 C13 C14 H142 257.1 180.0
H131 C13 O6 H132 120.0 120.0
O6 C13 C14 H131 238.4 240.0
O6 C13 C14 H132 119.4 120.1
H131 C13 C14 H132 240.9 240.1
O7 C14 C13 H141 120.7 120.0
O7 C14 C13 H142 237.0 239.9
C13 C14 O7 C15 190.5 180.0
H141 C14 C13 H142 116.4 119.9
O6 C13 H131 C14 119.0 120.0
O6 C13 H131 H132 239.1 239.9
C14 C13 H131 H132 120.1 119.9
H131 C13 C14 O7 255.7 180.0
H131 C13 C14 H141 135.0 60.0
H131 C13 C14 H142 18.6 300.1
O6 C13 H132 C14 242.2 240.0
O6 C13 H132 H131 122.0 120.1
C14 C13 H132 H131 239.8 240.1
H132 C13 C14 O7 14.7 299.9
H132 C13 C14 H141 254.1 179.9
H132 C13 C14 H142 137.7 60.0
O7 C14 C13 H131 255.7 180.0
O7 C14 C13 H132 14.7 299.9
C13 C14 O7 H141 239.6 240.0
C13 C14 O7 H142 122.8 120.1
H141 C14 O7 H142 243.2 240.0
C14 O7 C15 C16 283.7 180.0
C14 O7 C15 H151 163.4 60.1
C14 O7 C15 H152 45.2 300.0
H141 C14 C13 H131 135.0 60.0
H141 C14 C13 H132 254.1 179.9
C13 C14 H141 O7 123.6 120.0
C13 C14 H141 H142 242.2 240.0
O7 C14 H141 H142 118.5 120.0
H141 C14 O7 C15 310.8 300.0
H142 C14 C13 H131 18.6 300.1
H142 C14 C13 H132 137.7 60.0
C13 C14 H142 O7 234.8 240.0
C13 C14 H142 H141 117.0 119.9
O7 C14 H142 H141 242.2 240.0
H142 C14 O7 C15 67.7 59.9
C15 O7 C14 H141 310.8 300.0
C15 O7 C14 H142 67.7 59.9
C16 C15 O7 H151 120.3 120.0
C16 C15 O7 H152 238.5 240.0
O7 C15 C16 H16 180.0 180.0
O7 C15 C16 H162 103.1 300.1
O7 C15 C16 H161 223.1 60.1
H151 C15 O7 H152 118.2 120.0
O7 C15 C16 H151 239.7 240.1
O7 C15 C16 H152 122.0 120.0
H151 C15 C16 H152 242.3 240.0
H16 C16 C15 H162 77.0 240.0
H16 C16 C15 H161 316.9 120.0
H162 C16 C15 H161 240.0 240.0
O7 C15 H151 C16 121.2 119.9
O7 C15 H151 H152 240.1 240.0
C16 C15 H151 H152 118.9 120.0
H151 C15 C16 H16 300.3 300.0
H151 C15 C16 H162 223.4 60.0
H151 C15 C16 H161 343.4 180.0
O7 C15 H152 C16 237.8 240.0
O7 C15 H152 H151 119.2 120.0
C16 C15 H152 H151 241.3 240.0
H152 C15 C16 H16 58.0 60.0
H152 C15 C16 H162 341.1 180.0
H152 C15 C16 H161 101.1 300.0
H16 C16 C15 H151 300.3 300.0
H16 C16 C15 H152 58.0 60.0
C15 C16 H16 H162 255.5 120.0
C15 C16 H16 H161 96.0 240.0
H162 C16 H16 H161 200.5 120.0
H162 C16 C15 H151 223.4 60.0
H162 C16 C15 H152 341.1 180.0
C15 C16 H162 H16 106.1 239.9
C15 C16 H162 H161 120.0 120.0
H16 C16 H162 H161 13.9 240.1
H161 C16 C15 H151 343.4 180.0
H161 C16 C15 H152 101.1 300.0
C15 C16 H161 H16 260.6 120.0
C15 C16 H161 H162 239.9 240.0
H16 C16 H161 H162 339.4 120.0