PDB Chemical Component P30
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for P30
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O47 |
C44 |
1.427 |
1.430 |
| O47 |
C48 |
1.424 |
1.430 |
| C44 |
C41 |
1.529 |
1.531 |
| C41 |
N40 |
1.480 |
1.470 |
| C48 |
C51 |
1.522 |
1.531 |
| C51 |
N40 |
1.480 |
1.470 |
| N40 |
C37 |
1.470 |
1.469 |
| C37 |
C34 |
1.531 |
1.530 |
| C34 |
O33 |
1.431 |
1.429 |
| O33 |
C32 |
1.374 |
1.360 |
| C32 |
C28 |
1.418 |
1.389 |
| C32 |
C30 |
1.397 |
1.385 |
| C28 |
C26 |
1.396 |
1.375 |
| C30 |
C25 |
1.376 |
1.386 |
| C26 |
C24 |
1.381 |
1.403 |
| C25 |
C24 |
1.408 |
1.392 |
| C25 |
S23 |
1.797 |
1.768 |
| C24 |
N20 |
1.391 |
1.399 |
| S23 |
C21 |
1.731 |
1.770 |
| N20 |
C21 |
1.357 |
1.355 |
| N20 |
C18 |
1.366 |
1.390 |
| C21 |
N22 |
1.295 |
1.313 |
| C18 |
C17 |
1.389 |
1.355 |
| N22 |
C17 |
1.383 |
1.348 |
| C17 |
C12 |
1.450 |
1.483 |
| C12 |
C15 |
1.401 |
1.394 |
| C12 |
C8 |
1.396 |
1.394 |
| C15 |
C13 |
1.403 |
1.379 |
| C8 |
C10 |
1.404 |
1.378 |
| C13 |
C7 |
1.402 |
1.389 |
| C10 |
C7 |
1.396 |
1.390 |
| C7 |
N5 |
1.415 |
1.399 |
| O4 |
C3 |
1.230 |
1.216 |
| C61 |
C60 |
1.537 |
1.530 |
| N5 |
C3 |
1.389 |
1.348 |
| C3 |
N1 |
1.379 |
1.347 |
| C58 |
C57 |
1.376 |
1.352 |
| C58 |
C54 |
1.420 |
1.420 |
| C60 |
C65 |
1.533 |
1.530 |
| C60 |
C57 |
1.508 |
1.507 |
| C60 |
C69 |
1.530 |
1.529 |
| N1 |
C54 |
1.394 |
1.395 |
| C57 |
O56 |
1.364 |
1.341 |
| C54 |
N55 |
1.332 |
1.308 |
| O56 |
N55 |
1.374 |
1.209 |
| N1 |
H1 |
1.000 |
0.971 |
| N5 |
H2 |
1.000 |
0.970 |
| C8 |
H3 |
1.080 |
1.080 |
| C10 |
H4 |
1.080 |
1.080 |
| C13 |
H5 |
1.080 |
1.080 |
| C15 |
H6 |
1.080 |
1.080 |
| C18 |
H7 |
1.080 |
1.080 |
| C26 |
H8 |
1.080 |
1.080 |
| C28 |
H9 |
1.080 |
1.081 |
| C30 |
H10 |
1.080 |
1.080 |
| C34 |
H11 |
1.100 |
1.089 |
| C34 |
H12 |
1.100 |
1.091 |
| C37 |
H13 |
1.100 |
1.090 |
| C37 |
H14 |
1.100 |
1.090 |
| C41 |
H16 |
1.100 |
1.090 |
| C41 |
H17 |
1.100 |
1.091 |
| C44 |
H18 |
1.100 |
1.090 |
| C44 |
H19 |
1.100 |
1.090 |
| C48 |
H20 |
1.100 |
1.091 |
| C48 |
H21 |
1.100 |
1.090 |
| C51 |
H22 |
1.100 |
1.091 |
| C51 |
H23 |
1.100 |
1.089 |
| C58 |
H24 |
1.080 |
1.080 |
| C61 |
H25 |
1.100 |
1.090 |
| C61 |
H26 |
1.100 |
1.090 |
| C61 |
H27 |
1.100 |
1.090 |
| C65 |
H28 |
1.100 |
1.089 |
| C65 |
H29 |
1.100 |
1.090 |
| C65 |
H30 |
1.100 |
1.090 |
| C69 |
H31 |
1.100 |
1.090 |
| C69 |
H32 |
1.100 |
1.090 |
| C69 |
H33 |
1.100 |
1.089 |
Bond Angles for P30
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O47 |
C44 |
H18 |
109.1 |
109.5 |
| O47 |
C44 |
H19 |
109.1 |
109.5 |
| O47 |
C48 |
C51 |
108.2 |
109.3 |
| O47 |
C48 |
H20 |
109.8 |
109.5 |
| O47 |
C48 |
H21 |
109.8 |
109.5 |
| C44 |
C41 |
H16 |
108.8 |
109.5 |
| C44 |
C41 |
H17 |
108.8 |
109.5 |
| C51 |
C48 |
H20 |
109.8 |
109.5 |
| C51 |
C48 |
H21 |
109.8 |
109.5 |
| C48 |
C51 |
H22 |
109.4 |
109.5 |
| C48 |
C51 |
H23 |
109.5 |
109.5 |
| N40 |
C37 |
H13 |
108.8 |
109.4 |
| N40 |
C37 |
H14 |
108.8 |
109.5 |
| C37 |
C34 |
H11 |
110.1 |
109.5 |
| C37 |
C34 |
H12 |
110.2 |
109.4 |
| C32 |
C28 |
H9 |
119.0 |
119.6 |
| C32 |
C30 |
H10 |
121.1 |
120.1 |
| C28 |
C26 |
H8 |
122.3 |
119.7 |
| N20 |
C21 |
N22 |
113.0 |
109.8 |
| N20 |
C18 |
H7 |
128.0 |
126.4 |
| C12 |
C15 |
C13 |
119.7 |
119.9 |
| C12 |
C15 |
H6 |
120.2 |
120.0 |
| C12 |
C8 |
H3 |
119.1 |
120.0 |
| C15 |
C13 |
H5 |
119.0 |
119.9 |
| C10 |
C8 |
H3 |
119.1 |
120.0 |
| C8 |
C10 |
H4 |
119.9 |
120.0 |
| C7 |
N5 |
H2 |
118.1 |
120.0 |
| C61 |
C60 |
C65 |
110.8 |
109.5 |
| C61 |
C60 |
C69 |
106.4 |
109.5 |
| C3 |
N1 |
C54 |
124.3 |
120.0 |
| C3 |
N1 |
H1 |
117.9 |
120.0 |
| C65 |
C60 |
C69 |
110.2 |
109.5 |
| C60 |
C65 |
H28 |
109.5 |
109.5 |
| C60 |
C65 |
H29 |
109.5 |
109.4 |
| C60 |
C65 |
H30 |
109.5 |
109.5 |
| C60 |
C69 |
H31 |
109.5 |
109.5 |
| C60 |
C69 |
H32 |
109.4 |
109.5 |
| C60 |
C69 |
H33 |
109.4 |
109.5 |
| N1 |
C54 |
N55 |
120.6 |
126.9 |
| C54 |
N1 |
H1 |
117.9 |
120.0 |
| H11 |
C34 |
H12 |
109.5 |
109.5 |
| H13 |
C37 |
H14 |
109.5 |
109.5 |
| H16 |
C41 |
H17 |
109.5 |
109.5 |
| H18 |
C44 |
H19 |
109.5 |
109.5 |
| H20 |
C48 |
H21 |
109.5 |
109.5 |
| H22 |
C51 |
H23 |
109.5 |
109.5 |
| H25 |
C61 |
H26 |
109.5 |
109.5 |
| H25 |
C61 |
H27 |
109.5 |
109.5 |
| H26 |
C61 |
H27 |
109.5 |
109.5 |
| H28 |
C65 |
H29 |
109.5 |
109.4 |
| H28 |
C65 |
H30 |
109.5 |
109.5 |
| H29 |
C65 |
H30 |
109.4 |
109.4 |
| H31 |
C69 |
H32 |
109.5 |
109.4 |
| H31 |
C69 |
H33 |
109.5 |
109.4 |
| H32 |
C69 |
H33 |
109.5 |
109.5 |
Torsion Angles for P30
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O47 |
C44 |
C41 |
H16 |
70.3 |
296.9 |
| O47 |
C44 |
C41 |
H17 |
189.5 |
176.8 |
| H18 |
C44 |
O47 |
H19 |
240.4 |
120.0 |
| C48 |
O47 |
C44 |
H18 |
178.7 |
181.4 |
| C48 |
O47 |
C44 |
H19 |
298.3 |
61.3 |
| C51 |
C48 |
O47 |
H20 |
240.2 |
240.0 |
| C51 |
C48 |
O47 |
H21 |
119.8 |
119.9 |
| O47 |
C48 |
C51 |
H22 |
181.8 |
183.2 |
| O47 |
C48 |
C51 |
H23 |
301.8 |
63.1 |
| H20 |
C48 |
O47 |
H21 |
239.6 |
239.9 |
| H16 |
C41 |
C44 |
H17 |
240.7 |
120.1 |
| C41 |
N40 |
C37 |
H13 |
341.7 |
70.0 |
| C41 |
N40 |
C37 |
H14 |
100.9 |
310.0 |
| O47 |
C48 |
C51 |
H20 |
119.8 |
120.0 |
| O47 |
C48 |
C51 |
H21 |
240.2 |
240.1 |
| H20 |
C48 |
C51 |
H21 |
120.4 |
120.1 |
| H22 |
C51 |
C48 |
H23 |
240.0 |
120.1 |
| C51 |
N40 |
C37 |
H13 |
215.0 |
306.4 |
| C51 |
N40 |
C37 |
H14 |
334.2 |
186.4 |
| N40 |
C37 |
C34 |
H11 |
53.4 |
305.0 |
| N40 |
C37 |
C34 |
H12 |
174.3 |
185.0 |
| H13 |
C37 |
N40 |
H14 |
240.8 |
120.0 |
| H11 |
C34 |
C37 |
H12 |
239.2 |
120.0 |
| O33 |
C32 |
C28 |
H9 |
0.1 |
359.9 |
| O33 |
C32 |
C30 |
H10 |
359.9 |
0.0 |
| C32 |
C28 |
C26 |
H8 |
180.0 |
180.0 |
| C30 |
C32 |
C28 |
H9 |
180.0 |
179.4 |
| C24 |
N20 |
C18 |
H7 |
0.5 |
359.7 |
| C21 |
N20 |
C18 |
H7 |
180.3 |
180.0 |
| C17 |
C12 |
C15 |
H6 |
359.4 |
359.8 |
| C17 |
C12 |
C8 |
H3 |
0.5 |
359.9 |
| C15 |
C12 |
C8 |
H3 |
180.1 |
179.7 |
| C12 |
C15 |
C13 |
H5 |
180.7 |
180.1 |
| C10 |
C8 |
C12 |
H3 |
180.0 |
180.0 |
| C12 |
C8 |
C10 |
H4 |
179.4 |
180.0 |
| C12 |
C15 |
C13 |
H6 |
180.0 |
179.8 |
| C12 |
C8 |
C10 |
H3 |
180.0 |
180.0 |
| C13 |
C7 |
N5 |
H2 |
254.5 |
146.4 |
| C10 |
C7 |
N5 |
H2 |
77.0 |
326.7 |
| O4 |
C3 |
N1 |
C54 |
1.5 |
0.0 |
| O4 |
C3 |
N1 |
H1 |
181.5 |
179.7 |
| C65 |
C60 |
C61 |
C69 |
240.2 |
120.0 |
| C61 |
C60 |
C65 |
H28 |
180.0 |
180.0 |
| C61 |
C60 |
C65 |
H29 |
300.0 |
300.0 |
| C61 |
C60 |
C65 |
H30 |
60.0 |
59.9 |
| C61 |
C60 |
C69 |
H31 |
180.0 |
180.0 |
| C61 |
C60 |
C69 |
H32 |
300.0 |
300.0 |
| C61 |
C60 |
C69 |
H33 |
60.0 |
60.0 |
| N5 |
C3 |
N1 |
C54 |
181.0 |
180.0 |
| N5 |
C3 |
N1 |
H1 |
1.0 |
359.6 |
| C3 |
N1 |
C54 |
N55 |
194.5 |
179.8 |
| C54 |
N1 |
C3 |
H1 |
180.0 |
180.3 |
| C58 |
C54 |
N1 |
H1 |
197.1 |
179.7 |
| C61 |
C60 |
C65 |
C69 |
117.5 |
239.9 |
| C65 |
C60 |
C69 |
H31 |
300.2 |
60.0 |
| C65 |
C60 |
C69 |
H32 |
60.2 |
179.9 |
| C65 |
C60 |
C69 |
H33 |
180.2 |
300.0 |
| H28 |
C65 |
C60 |
H29 |
240.0 |
240.0 |
| H28 |
C65 |
C60 |
H30 |
120.0 |
120.1 |
| H29 |
C65 |
C60 |
H30 |
240.0 |
240.0 |
| C61 |
C60 |
C69 |
C65 |
239.8 |
120.0 |
| C69 |
C60 |
C65 |
H28 |
62.5 |
300.0 |
| C69 |
C60 |
C65 |
H29 |
182.5 |
60.0 |
| C69 |
C60 |
C65 |
H30 |
302.5 |
180.0 |
| H31 |
C69 |
C60 |
H32 |
240.0 |
240.0 |
| H31 |
C69 |
C60 |
H33 |
120.0 |
120.0 |
| H32 |
C69 |
C60 |
H33 |
240.0 |
240.0 |
| C3 |
N1 |
C54 |
H1 |
180.0 |
179.7 |
| N55 |
C54 |
N1 |
H1 |
14.5 |
0.1 |
| C3 |
N1 |
H1 |
C54 |
180.0 |
180.3 |
| H1 |
N1 |
C54 |
N55 |
14.5 |
0.1 |
| H3 |
C8 |
C10 |
H4 |
359.4 |
0.0 |
| H4 |
C10 |
C8 |
H3 |
359.4 |
0.0 |
| C12 |
C15 |
H6 |
C13 |
180.0 |
180.2 |
| H6 |
C15 |
C13 |
H5 |
0.7 |
0.3 |
| H9 |
C28 |
C26 |
H8 |
360.0 |
0.1 |
| C37 |
C34 |
H11 |
H12 |
121.2 |
240.0 |
| C37 |
C34 |
H12 |
H11 |
238.8 |
120.0 |
| N40 |
C37 |
H13 |
H14 |
118.8 |
240.0 |
| H13 |
C37 |
C34 |
H11 |
293.0 |
64.9 |
| H13 |
C37 |
C34 |
H12 |
53.9 |
304.9 |
| N40 |
C37 |
H14 |
H13 |
241.2 |
119.9 |
| H14 |
C37 |
C34 |
H11 |
173.8 |
185.0 |
| H14 |
C37 |
C34 |
H12 |
294.7 |
65.0 |
| C44 |
C41 |
H16 |
H17 |
118.8 |
239.9 |
| C44 |
C41 |
H17 |
H16 |
241.2 |
120.1 |
| O47 |
C44 |
H18 |
H19 |
119.3 |
239.9 |
| H18 |
C44 |
C41 |
H16 |
310.0 |
56.9 |
| H18 |
C44 |
C41 |
H17 |
69.3 |
296.8 |
| O47 |
C44 |
H19 |
H18 |
240.7 |
120.1 |
| H19 |
C44 |
C41 |
H16 |
190.5 |
176.9 |
| H19 |
C44 |
C41 |
H17 |
309.8 |
56.8 |
| O47 |
C48 |
H20 |
C51 |
241.2 |
240.2 |
| O47 |
C48 |
H20 |
H21 |
120.5 |
120.1 |
| C51 |
C48 |
H20 |
H21 |
239.4 |
239.9 |
| H20 |
C48 |
C51 |
H22 |
62.0 |
63.3 |
| H20 |
C48 |
C51 |
H23 |
182.0 |
303.1 |
| O47 |
C48 |
H21 |
C51 |
118.9 |
119.8 |
| O47 |
C48 |
H21 |
H20 |
239.5 |
239.9 |
| C51 |
C48 |
H21 |
H20 |
120.6 |
120.1 |
| H21 |
C48 |
C51 |
H22 |
301.6 |
303.2 |
| H21 |
C48 |
C51 |
H23 |
61.6 |
183.1 |
| H22 |
C51 |
C48 |
H20 |
62.0 |
63.3 |
| H22 |
C51 |
C48 |
H21 |
301.6 |
303.2 |
| C48 |
C51 |
H22 |
H23 |
120.0 |
239.9 |
| H23 |
C51 |
C48 |
H20 |
182.0 |
303.1 |
| H23 |
C51 |
C48 |
H21 |
61.6 |
183.1 |
| C48 |
C51 |
H23 |
H22 |
240.0 |
120.1 |
| H25 |
C61 |
C60 |
C65 |
180.0 |
60.1 |
| H25 |
C61 |
C60 |
C69 |
299.8 |
300.0 |
| H26 |
C61 |
H25 |
H27 |
120.0 |
120.0 |
| H26 |
C61 |
C60 |
C65 |
300.0 |
180.0 |
| H26 |
C61 |
C60 |
C69 |
59.8 |
60.0 |
| H25 |
C61 |
H26 |
H27 |
240.0 |
240.0 |
| H27 |
C61 |
C60 |
C65 |
60.0 |
300.1 |
| H27 |
C61 |
C60 |
C69 |
179.8 |
180.0 |
| H25 |
C61 |
H27 |
H26 |
120.0 |
120.0 |
| H28 |
C65 |
C60 |
C69 |
62.5 |
300.0 |
| C60 |
C65 |
H28 |
H29 |
120.0 |
120.0 |
| C60 |
C65 |
H28 |
H30 |
240.0 |
239.9 |
| H29 |
C65 |
H28 |
H30 |
120.0 |
119.9 |
| H29 |
C65 |
C60 |
C69 |
182.5 |
60.0 |
| C60 |
C65 |
H29 |
H28 |
240.0 |
240.0 |
| C60 |
C65 |
H29 |
H30 |
120.0 |
120.0 |
| H28 |
C65 |
H29 |
H30 |
240.0 |
240.0 |
| H30 |
C65 |
C60 |
C69 |
302.5 |
180.0 |
| C60 |
C65 |
H30 |
H28 |
120.0 |
120.1 |
| C60 |
C65 |
H30 |
H29 |
240.0 |
240.0 |
| H28 |
C65 |
H30 |
H29 |
120.0 |
119.9 |
| C60 |
C69 |
H31 |
H32 |
120.0 |
120.0 |
| C60 |
C69 |
H31 |
H33 |
240.0 |
240.0 |
| H32 |
C69 |
H31 |
H33 |
120.0 |
119.9 |
| C60 |
C69 |
H32 |
H31 |
240.0 |
240.0 |
| C60 |
C69 |
H32 |
H33 |
119.9 |
120.0 |
| H31 |
C69 |
H32 |
H33 |
240.0 |
240.1 |
| C60 |
C69 |
H33 |
H31 |
120.0 |
120.0 |
| C60 |
C69 |
H33 |
H32 |
240.0 |
239.9 |
| H31 |
C69 |
H33 |
H32 |
120.0 |
119.9 |