PDB Chemical Component P2H

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for P2H

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C7 C8 1.498 1.530
C7 N12 1.463 1.465
C7 H7 1.100 1.089
C7 H7A 1.100 1.090
C8 P9 1.833 1.823
C8 O13 1.448 1.429
C8 P14 1.808 1.823
P9 O10 1.516 1.610
P9 O11 1.527 1.609
P9 O12 1.485 1.480
N12 C13 1.398 1.319
N12 C17 1.339 1.318
C13 C14 1.398 1.384
C13 H13 1.080 1.079
O13 HO13 0.950 0.966
C14 C15 1.414 1.384
C14 H14 1.080 1.079
P14 O15 1.526 1.610
P14 O16 1.523 1.610
P14 O17 1.515 1.480
C15 C16 1.412 1.398
C15 H15 1.080 1.081
C16 C17 1.377 1.393
C16 C18 1.510 1.484
C17 H17 1.080 1.080
C18 C19 1.392 1.393
C18 C23 1.429 1.394
C19 C20 1.402 1.380
C19 H19 1.080 1.080
C20 C21 1.405 1.383
C20 H20 1.080 1.080
C21 C22 1.398 1.383
C21 H21 1.080 1.080
C22 C23 1.388 1.380
C22 H22 1.080 1.080
C23 H23 1.080 1.080
O10 H131 0.949 0.967
O11 H141 0.950 0.967
O15 H151 0.950 0.967
O16 H16 0.950 0.966

Bond Angles for P2H

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C8 C7 N12 121.7 109.4
C8 C7 H7 105.6 109.5
C8 C7 H7A 105.6 109.5
C7 C8 P9 111.9 109.5
C7 C8 O13 117.4 109.5
C7 C8 P14 92.6 109.4
N12 C7 H7 105.6 109.5
N12 C7 H7A 105.6 109.4
C7 N12 C13 127.9 119.1
C7 N12 C17 106.2 119.1
H7 C7 H7A 113.1 109.5
P9 C8 O13 111.6 109.5
P9 C8 P14 112.8 109.5
C8 P9 O10 111.1 109.5
C8 P9 O11 110.5 109.5
C8 P9 O12 99.3 109.5
O13 C8 P14 109.1 109.4
C8 O13 HO13 109.5 113.9
C8 P14 O15 106.0 109.5
C8 P14 O16 105.7 109.5
C8 P14 O17 106.9 109.5
O10 P9 O11 113.6 109.5
O10 P9 O12 112.8 109.5
P9 O10 H131 109.5 114.0
O11 P9 O12 108.5 109.5
P9 O11 H141 109.5 114.0
C13 N12 C17 125.7 121.9
N12 C13 C14 114.4 121.0
N12 C13 H13 122.8 119.5
N12 C17 C16 121.1 120.6
N12 C17 H17 119.5 119.7
C14 C13 H13 122.8 119.5
C13 C14 C15 120.4 119.3
C13 C14 H14 119.8 120.3
C15 C14 H14 119.8 120.4
C14 C15 C16 121.9 118.3
C14 C15 H15 119.0 120.8
O15 P14 O16 115.5 109.4
O15 P14 O17 111.3 109.5
P14 O15 H151 109.5 114.0
O16 P14 O17 110.8 109.5
P14 O16 H16 109.5 114.0
C16 C15 H15 119.1 120.8
C15 C16 C17 115.8 118.9
C15 C16 C18 126.2 120.5
C17 C16 C18 116.6 120.6
C16 C17 H17 119.4 119.7
C16 C18 C19 122.7 120.1
C16 C18 C23 119.1 120.1
C19 C18 C23 118.2 119.8
C18 C19 C20 118.9 119.9
C18 C19 H19 120.6 120.1
C18 C23 C22 123.0 119.8
C18 C23 H23 118.5 120.1
C20 C19 H19 120.5 120.0
C19 C20 C21 122.3 120.1
C19 C20 H20 118.8 120.0
C21 C20 H20 118.9 119.9
C20 C21 C22 119.5 120.2
C20 C21 H21 120.3 119.9
C22 C21 H21 120.2 119.9
C21 C22 C23 118.2 120.1
C21 C22 H22 120.9 120.0
C23 C22 H22 120.9 119.9
C22 C23 H23 118.5 120.1

Torsion Angles for P2H

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N12 C7 C8 H7 240.0 240.0
N12 C7 C8 H7A 120.0 119.9
C8 C7 N12 C13 349.6 97.3
C8 C7 N12 C17 165.7 277.0
H7 C7 C8 H7A 240.0 239.9
P9 C8 C7 O13 131.1 239.9
P9 C8 C7 P14 244.1 120.0
C7 C8 P9 O10 286.7 60.0
C7 C8 P9 O11 53.8 180.0
C7 C8 P9 O12 167.7 300.1
O13 C8 C7 P14 113.1 240.0
C7 C8 O13 HO13 160.6 300.0
C7 C8 P14 O15 298.6 304.8
C7 C8 P14 O16 175.5 64.8
C7 C8 P14 O17 57.5 184.8
C8 C7 N12 H7 120.0 120.0
C8 C7 N12 H7A 240.0 240.1
N12 C7 C8 P9 151.2 294.3
N12 C7 C8 O13 20.1 54.4
N12 C7 C8 P14 267.0 174.4
H7 C7 N12 H7A 120.0 120.0
C13 N12 C7 C17 183.9 180.3
C7 N12 C13 C14 172.6 180.0
C7 N12 C13 H13 352.6 0.0
C7 N12 C17 C16 179.6 179.8
C7 N12 C17 H17 359.6 0.0
C8 C7 H7 N12 229.9 240.0
C8 C7 H7 H7A 114.9 120.1
H7 C7 C8 P9 271.2 54.3
H7 C7 C8 O13 140.1 174.4
H7 C7 C8 P14 27.0 294.4
N12 C7 H7 H7A 245.0 240.0
H7 C7 N12 C13 229.6 337.3
H7 C7 N12 C17 45.7 157.0
C8 C7 H7A N12 130.1 119.9
C8 C7 H7A H7 245.1 239.9
H7A C7 C8 P9 31.1 174.4
H7A C7 C8 O13 260.1 294.5
H7A C7 C8 P14 147.0 54.4
N12 C7 H7A H7 115.0 120.0
H7A C7 N12 C13 109.6 217.2
H7A C7 N12 C17 285.7 36.9
P9 C8 C7 N12 151.2 294.3
P9 C8 C7 H7 271.2 54.3
P9 C8 C7 H7A 31.1 174.4
C7 C8 P9 O13 226.1 120.1
C7 C8 P9 P14 102.8 240.0
O13 C8 P9 P14 236.8 120.0
P9 C8 O13 HO13 29.4 60.0
P9 C8 P14 O15 53.7 184.8
P9 C8 P14 O16 290.6 304.8
P9 C8 P14 O17 172.6 64.8
O10 P9 C8 O11 232.9 240.0
O10 P9 C8 O12 119.0 120.0
C8 P9 O10 H131 249.4 180.0
O11 P9 C8 O12 246.1 240.0
C8 P9 O11 H141 107.9 300.0
O13 C8 C7 N12 20.1 54.4
O13 C8 C7 H7 140.1 174.4
O13 C8 C7 H7A 260.1 294.5
C7 C8 O13 P9 131.2 239.9
C7 C8 O13 P14 256.5 120.0
P9 C8 O13 P14 125.3 240.0
O13 C8 P9 O10 60.7 300.0
O13 C8 P9 O11 187.8 60.0
O13 C8 P9 O12 301.7 180.0
O13 C8 P14 O15 178.4 64.8
O13 C8 P14 O16 55.3 184.8
O13 C8 P14 O17 297.2 304.8
P14 C8 C7 N12 267.0 174.4
P14 C8 C7 H7 27.0 294.4
P14 C8 C7 H7A 147.0 54.4
C7 C8 P14 P9 244.9 120.0
C7 C8 P14 O13 120.3 240.0
P9 C8 P14 O13 235.4 120.0
P14 C8 P9 O10 183.9 180.0
P14 C8 P9 O11 311.0 300.0
P14 C8 P9 O12 64.9 60.0
P14 C8 O13 HO13 264.1 180.0
O15 P14 C8 O16 123.1 240.0
O15 P14 C8 O17 241.1 120.0
C8 P14 O15 H151 116.0 55.0
O16 P14 C8 O17 118.1 240.0
C8 P14 O16 H16 244.6 180.0
O10 P9 C8 O13 60.7 300.0
O10 P9 C8 P14 183.9 180.0
C8 P9 O10 O11 125.4 120.0
C8 P9 O10 O12 249.4 240.0
O11 P9 O10 O12 124.0 120.0
O10 P9 O11 H141 233.6 60.0
O11 P9 C8 O13 187.8 60.0
O11 P9 C8 P14 311.0 300.0
C8 P9 O11 O10 234.3 240.0
C8 P9 O11 O12 107.9 120.0
O10 P9 O11 O12 233.6 240.0
O11 P9 O10 H131 124.0 60.0
O12 P9 C8 O13 301.7 180.0
O12 P9 C8 P14 64.9 60.0
C8 P9 O12 O10 117.8 120.0
C8 P9 O12 O11 244.6 240.0
O10 P9 O12 O11 126.8 120.0
O12 P9 O10 H131 0.0 300.0
O12 P9 O11 H141 360.0 179.9
C13 N12 C7 H7 229.6 337.3
C13 N12 C7 H7A 109.6 217.2
C7 N12 C13 C17 175.4 179.7
C13 N12 C17 C16 355.8 359.5
C13 N12 C17 H17 175.8 179.7
C14 C13 N12 H13 180.0 180.0
N12 C13 C14 C15 3.6 360.0
N12 C13 C14 H14 183.6 180.0
C17 N12 C7 H7 45.7 157.0
C17 N12 C7 H7A 285.7 36.9
C7 N12 C17 C13 183.8 180.3
C17 N12 C13 C14 357.2 0.3
C17 N12 C13 H13 177.2 180.3
C15 C16 C17 N12 9.7 0.5
N12 C17 C16 C18 177.0 180.3
C16 C17 N12 H17 180.0 179.7
C14 C13 N12 C17 357.2 0.3
N12 C13 C14 H13 180.0 180.0
C15 C14 C13 H14 180.0 180.0
C13 C14 C15 C16 2.2 360.0
C13 C14 C15 H15 182.2 179.9
H13 C13 N12 C17 177.2 180.3
N12 C13 H13 C14 180.0 180.0
H13 C13 C14 C15 183.6 180.0
H13 C13 C14 H14 3.6 360.0
HO13 O13 C8 P14 264.1 180.0
C15 C14 C13 H13 183.6 180.0
C13 C14 C15 H14 180.0 180.0
C16 C15 C14 H15 180.0 180.1
C14 C15 C16 C17 351.2 359.8
C14 C15 C16 C18 185.3 180.0
H14 C14 C13 H13 3.6 360.0
C13 C14 H14 C15 180.0 180.0
H14 C14 C15 C16 182.2 180.0
H14 C14 C15 H15 2.2 360.0
C8 P14 O15 O16 243.4 120.0
C8 P14 O15 O17 115.9 240.0
O16 P14 O15 O17 232.6 120.0
O15 P14 O16 H16 127.7 300.0
C8 P14 O16 O15 116.9 240.0
C8 P14 O16 O17 244.6 120.0
O15 P14 O16 O17 127.7 240.0
O16 P14 O15 H151 232.6 295.0
C8 P14 O17 O15 244.6 120.0
C8 P14 O17 O16 114.7 240.0
O15 P14 O17 O16 230.1 120.0
O17 P14 O15 H151 0.0 175.0
O17 P14 O16 H16 0.0 60.0
N12 C17 C16 C15 9.7 0.5
C16 C15 C14 H14 182.2 180.0
C14 C15 C16 H15 180.0 179.9
C17 C16 C15 C18 165.9 179.8
C15 C16 C17 H17 189.7 180.2
C15 C16 C18 C19 350.6 0.0
C15 C16 C18 C23 169.0 179.8
H15 C15 C14 H14 2.2 360.0
C14 C15 H15 C16 180.0 180.1
H15 C15 C16 C17 171.2 179.8
H15 C15 C16 C18 5.3 0.0
N12 C17 C16 H17 180.0 180.3
C17 C16 C15 H15 171.2 179.8
C15 C16 C17 C18 192.7 180.2
C17 C16 C18 C19 184.9 180.2
C17 C16 C18 C23 3.2 360.0
C18 C16 C15 H15 5.3 0.0
C15 C16 C18 C17 165.8 179.8
C18 C16 C17 H17 357.0 0.0
C19 C18 C16 C23 181.7 180.3
C16 C18 C19 C20 181.4 180.0
C16 C18 C19 H19 1.4 359.9
C16 C18 C23 C22 179.7 179.7
C16 C18 C23 H23 359.7 359.9
N12 C17 H17 C16 180.0 179.7
H17 C17 C16 C18 357.0 0.0
C16 C18 C19 C23 178.3 179.7
C19 C18 C23 C22 358.1 359.5
C19 C18 C23 H23 178.1 179.7
C20 C19 C18 H19 180.0 180.1
C18 C19 C20 C21 357.6 360.0
C18 C19 C20 H20 177.6 180.0
C16 C18 C23 C19 181.6 180.3
C23 C18 C19 C20 3.1 0.3
C23 C18 C19 H19 183.1 180.2
C21 C22 C23 C18 359.9 0.5
C18 C23 C22 H22 179.9 180.3
C22 C23 C18 H23 180.0 179.8
C20 C19 C18 C23 3.1 0.3
C18 C19 C20 H19 180.0 179.9
C21 C20 C19 H20 180.0 180.0
C19 C20 C21 C22 0.3 360.0
C19 C20 C21 H21 180.3 180.0
H19 C19 C18 C23 183.1 180.2
C18 C19 H19 C20 180.0 180.1
H19 C19 C20 C21 177.6 180.1
H19 C19 C20 H20 357.6 0.1
C21 C20 C19 H19 177.6 180.1
C19 C20 C21 H20 180.0 180.0
C22 C21 C20 H21 180.0 180.0
C20 C21 C22 C23 0.9 359.8
C20 C21 C22 H22 180.9 180.0
H20 C20 C19 H19 357.6 0.1
C19 C20 H20 C21 180.0 180.0
H20 C20 C21 C22 180.3 179.9
H20 C20 C21 H21 0.3 360.0
C18 C23 C22 C21 359.9 0.5
C22 C21 C20 H20 180.3 179.9
C20 C21 C22 H21 180.0 180.0
C23 C22 C21 H22 180.0 179.8
C21 C22 C23 H23 179.8 180.3
H21 C21 C20 H20 0.3 360.0
C20 C21 H21 C22 180.0 180.0
H21 C21 C22 C23 180.9 179.8
H21 C21 C22 H22 0.9 360.0
C18 C23 C22 H23 180.0 180.2
C23 C22 C21 H21 180.9 179.8
C21 C22 C23 H22 180.0 180.2
H22 C22 C21 H21 0.9 360.0
C21 C22 H22 C23 180.0 179.8
H22 C22 C23 H23 359.9 0.1
C18 C23 H23 C22 180.0 179.8
H23 C23 C22 H22 359.9 0.1
H131 O10 P9 O11 124.0 60.0
H131 O10 P9 O12 0.0 300.0
H141 O11 P9 O12 360.0 179.9
H151 O15 P14 O16 232.6 295.0
H151 O15 P14 O17 0.0 175.0
H16 O16 P14 O17 0.0 60.0