PDB Chemical Component P18
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for P18
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O |
C |
1.219 |
1.213 |
C |
C1 |
1.506 |
1.508 |
C |
C3 |
1.494 |
1.472 |
C1 |
C2 |
1.520 |
1.530 |
C2 |
OXT |
1.798 |
1.429 |
C3 |
C8 |
1.395 |
1.399 |
C3 |
C4 |
1.394 |
1.399 |
C8 |
C7 |
1.388 |
1.379 |
C7 |
C6 |
1.381 |
1.384 |
C4 |
C5 |
1.388 |
1.378 |
C5 |
C6 |
1.382 |
1.384 |
C1 |
H11C |
1.100 |
1.090 |
C1 |
H12C |
1.100 |
1.089 |
C2 |
H21C |
1.100 |
1.090 |
C2 |
H22C |
1.100 |
1.089 |
OXT |
HXT |
0.950 |
0.967 |
C8 |
H8 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.080 |
C7 |
H7 |
1.080 |
1.079 |
C6 |
H6 |
1.080 |
1.079 |
C5 |
H5 |
1.080 |
1.080 |
Bond Angles for P18
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C |
C1 |
119.5 |
120.0 |
O |
C |
C3 |
120.6 |
120.0 |
C1 |
C |
C3 |
119.9 |
120.0 |
C |
C1 |
C2 |
114.7 |
109.4 |
C |
C1 |
H11C |
108.1 |
109.4 |
C |
C1 |
H12C |
108.1 |
109.5 |
C |
C3 |
C8 |
119.9 |
120.2 |
C |
C3 |
C4 |
121.4 |
120.2 |
C1 |
C2 |
OXT |
110.8 |
109.5 |
C2 |
C1 |
H11C |
108.2 |
109.4 |
C2 |
C1 |
H12C |
108.2 |
109.5 |
C1 |
C2 |
H21C |
109.1 |
109.4 |
C1 |
C2 |
H22C |
109.1 |
109.5 |
OXT |
C2 |
H21C |
109.1 |
109.4 |
OXT |
C2 |
H22C |
109.1 |
109.5 |
C2 |
OXT |
HXT |
109.5 |
114.0 |
C8 |
C3 |
C4 |
118.7 |
119.7 |
C3 |
C8 |
C7 |
120.5 |
119.8 |
C3 |
C8 |
H8 |
119.7 |
120.1 |
C3 |
C4 |
C5 |
120.4 |
119.8 |
C3 |
C4 |
H4 |
119.8 |
120.1 |
C8 |
C7 |
C6 |
120.3 |
120.2 |
C7 |
C8 |
H8 |
119.8 |
120.1 |
C8 |
C7 |
H7 |
119.9 |
119.9 |
C7 |
C6 |
C5 |
119.8 |
120.3 |
C6 |
C7 |
H7 |
119.8 |
119.9 |
C7 |
C6 |
H6 |
120.1 |
119.8 |
C4 |
C5 |
C6 |
120.3 |
120.2 |
C5 |
C4 |
H4 |
119.8 |
120.1 |
C4 |
C5 |
H5 |
119.8 |
119.9 |
C5 |
C6 |
H6 |
120.1 |
119.8 |
C6 |
C5 |
H5 |
119.8 |
119.9 |
H11C |
C1 |
H12C |
109.5 |
109.5 |
H21C |
C2 |
H22C |
109.5 |
109.5 |
Torsion Angles for P18
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C |
O |
C3 |
178.5 |
180.2 |
O |
C |
C1 |
C2 |
357.1 |
0.1 |
O |
C |
C1 |
H11C |
117.8 |
120.0 |
O |
C |
C1 |
H12C |
236.3 |
240.0 |
O |
C |
C3 |
C8 |
358.6 |
359.9 |
O |
C |
C3 |
C4 |
177.2 |
179.7 |
O |
C |
C1 |
C3 |
181.5 |
179.8 |
C1 |
C |
C3 |
C8 |
180.1 |
179.7 |
C1 |
C |
C3 |
C4 |
358.7 |
359.5 |
C |
C1 |
C2 |
OXT |
89.6 |
180.0 |
C2 |
C1 |
C |
H11C |
239.2 |
240.1 |
C2 |
C1 |
C |
H12C |
120.8 |
120.0 |
C |
C1 |
C2 |
H21C |
209.7 |
299.9 |
C |
C1 |
C2 |
H22C |
329.3 |
60.0 |
H11C |
C1 |
C |
H12C |
241.6 |
240.0 |
O |
C |
C3 |
C1 |
178.5 |
180.2 |
C3 |
C |
C1 |
C2 |
175.6 |
180.3 |
C3 |
C |
C1 |
H11C |
296.4 |
300.2 |
C3 |
C |
C1 |
H12C |
54.8 |
60.3 |
C8 |
C3 |
C |
C4 |
181.4 |
180.2 |
C |
C3 |
C8 |
C7 |
178.0 |
180.0 |
C |
C3 |
C8 |
H8 |
358.0 |
0.0 |
C |
C3 |
C4 |
C5 |
182.2 |
180.0 |
C |
C3 |
C4 |
H4 |
2.2 |
0.0 |
C2 |
C1 |
C |
C3 |
175.6 |
180.3 |
C |
C1 |
C2 |
H11C |
120.8 |
119.9 |
C |
C1 |
C2 |
H12C |
239.2 |
240.0 |
OXT |
C2 |
C1 |
H21C |
239.8 |
240.1 |
OXT |
C2 |
C1 |
H22C |
120.2 |
120.0 |
C1 |
C2 |
OXT |
HXT |
180.0 |
180.0 |
H11C |
C1 |
C2 |
H12C |
118.5 |
120.1 |
H21C |
C2 |
C1 |
H22C |
240.4 |
239.9 |
OXT |
C2 |
C1 |
H11C |
328.8 |
60.1 |
OXT |
C2 |
C1 |
H12C |
210.3 |
300.0 |
C1 |
C2 |
OXT |
H21C |
120.2 |
119.9 |
C1 |
C2 |
OXT |
H22C |
239.8 |
240.0 |
H21C |
C2 |
OXT |
H22C |
119.6 |
120.0 |
C |
C3 |
C8 |
C4 |
178.7 |
179.8 |
C8 |
C3 |
C4 |
C5 |
0.9 |
359.8 |
C8 |
C3 |
C4 |
H4 |
180.9 |
179.8 |
C3 |
C8 |
C7 |
C6 |
0.1 |
360.0 |
C7 |
C8 |
C3 |
H8 |
180.0 |
180.0 |
C3 |
C8 |
C7 |
H7 |
180.1 |
180.0 |
C |
C3 |
C4 |
C8 |
181.3 |
180.2 |
C4 |
C3 |
C8 |
C7 |
359.3 |
0.2 |
C4 |
C3 |
C8 |
H8 |
179.3 |
180.2 |
C3 |
C4 |
C5 |
C6 |
359.5 |
360.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
H5 |
179.5 |
180.0 |
C7 |
C8 |
C3 |
C4 |
359.3 |
0.2 |
C3 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
C8 |
C7 |
C6 |
C5 |
0.2 |
359.8 |
C6 |
C7 |
C8 |
H7 |
180.0 |
180.0 |
C8 |
C7 |
C6 |
H6 |
180.3 |
180.0 |
C6 |
C7 |
C8 |
H8 |
180.1 |
180.0 |
C8 |
C7 |
C6 |
H7 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
C7 |
359.9 |
0.2 |
C5 |
C6 |
C7 |
H6 |
180.0 |
179.8 |
C7 |
C6 |
C5 |
H5 |
179.9 |
180.2 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C7 |
C6 |
C5 |
C4 |
359.9 |
0.2 |
C4 |
C5 |
C6 |
H6 |
179.9 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
H7 |
180.3 |
179.7 |
C7 |
C6 |
C5 |
H6 |
180.0 |
180.2 |
C6 |
C5 |
C4 |
H4 |
179.5 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
H11C |
C1 |
C |
C3 |
296.4 |
300.2 |
C |
C1 |
H11C |
C2 |
235.2 |
240.1 |
C |
C1 |
H11C |
H12C |
117.6 |
120.0 |
H11C |
C1 |
C2 |
OXT |
328.8 |
60.1 |
C2 |
C1 |
H11C |
H12C |
242.4 |
240.0 |
H11C |
C1 |
C2 |
H21C |
89.0 |
180.0 |
H11C |
C1 |
C2 |
H22C |
208.6 |
300.1 |
H12C |
C1 |
C |
C3 |
54.8 |
60.3 |
C |
C1 |
H12C |
C2 |
124.8 |
120.0 |
C |
C1 |
H12C |
H11C |
242.4 |
240.0 |
H12C |
C1 |
C2 |
OXT |
210.3 |
300.0 |
C2 |
C1 |
H12C |
H11C |
117.6 |
120.0 |
H12C |
C1 |
C2 |
H21C |
330.5 |
59.9 |
H12C |
C1 |
C2 |
H22C |
90.1 |
180.0 |
C1 |
C2 |
H21C |
OXT |
238.8 |
240.1 |
H21C |
C2 |
C1 |
H11C |
89.0 |
180.0 |
H21C |
C2 |
C1 |
H12C |
330.5 |
59.9 |
C1 |
C2 |
H21C |
H22C |
119.4 |
120.0 |
OXT |
C2 |
H21C |
H22C |
240.6 |
240.0 |
H21C |
C2 |
OXT |
HXT |
59.8 |
60.1 |
C1 |
C2 |
H22C |
OXT |
121.2 |
120.0 |
H22C |
C2 |
C1 |
H11C |
208.6 |
300.1 |
H22C |
C2 |
C1 |
H12C |
90.1 |
180.0 |
C1 |
C2 |
H22C |
H21C |
240.6 |
240.0 |
OXT |
C2 |
H22C |
H21C |
119.4 |
120.0 |
H22C |
C2 |
OXT |
HXT |
300.2 |
300.0 |
HXT |
OXT |
C2 |
H21C |
59.8 |
60.1 |
HXT |
OXT |
C2 |
H22C |
300.2 |
300.0 |
H8 |
C8 |
C3 |
C4 |
179.3 |
180.2 |
C3 |
C8 |
H8 |
C7 |
180.0 |
180.0 |
H8 |
C8 |
C7 |
C6 |
180.1 |
180.0 |
H8 |
C8 |
C7 |
H7 |
0.1 |
0.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
C6 |
179.5 |
180.0 |
H4 |
C4 |
C5 |
H5 |
359.5 |
360.0 |
C8 |
C7 |
H7 |
C6 |
180.0 |
180.0 |
H7 |
C7 |
C8 |
H8 |
0.1 |
0.0 |
H7 |
C7 |
C6 |
C5 |
180.3 |
179.7 |
H7 |
C7 |
C6 |
H6 |
0.3 |
359.9 |
C7 |
C6 |
H6 |
C5 |
180.0 |
179.8 |
H6 |
C6 |
C7 |
H7 |
0.3 |
359.9 |
H6 |
C6 |
C5 |
H5 |
359.9 |
0.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C4 |
H4 |
359.5 |
360.0 |
H5 |
C5 |
C6 |
H6 |
359.9 |
0.0 |