PDB Chemical Component OXJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OXJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CBQ |
NBO |
1.459 |
1.470 |
| CBR |
CBS |
1.488 |
1.507 |
| CBR |
NBO |
1.467 |
1.469 |
| CBS |
CBX |
1.393 |
1.382 |
| CBS |
CBT |
1.398 |
1.383 |
| CBT |
CBU |
1.411 |
1.382 |
| CBU |
CBV |
1.394 |
1.382 |
| CBU |
CBZ |
1.503 |
1.507 |
| CBV |
CBW |
1.404 |
1.382 |
| CBW |
CBX |
1.415 |
1.383 |
| CBW |
CBY |
1.502 |
1.507 |
| CBY |
FCB |
1.372 |
1.399 |
| CBY |
FCC |
1.375 |
1.399 |
| CBY |
FCA |
1.373 |
1.399 |
| CBZ |
FCD |
1.376 |
1.399 |
| CBZ |
FCE |
1.372 |
1.400 |
| CBZ |
FCF |
1.376 |
1.399 |
| CBQ |
H36 |
1.100 |
1.090 |
| CBQ |
H37 |
1.100 |
1.090 |
| CBQ |
H38 |
1.100 |
1.090 |
| CBR |
H39 |
1.100 |
1.090 |
| CBR |
H40 |
1.100 |
1.090 |
| CBT |
H41 |
1.080 |
1.081 |
| CBV |
H42 |
1.080 |
1.080 |
| CBX |
H43 |
1.080 |
1.080 |
| NBO |
H2 |
1.000 |
1.009 |
Bond Angles for OXJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CBQ |
NBO |
CBR |
117.1 |
111.0 |
| NBO |
CBQ |
H36 |
109.5 |
109.5 |
| NBO |
CBQ |
H37 |
109.5 |
109.4 |
| NBO |
CBQ |
H38 |
109.5 |
109.5 |
| CBQ |
NBO |
H2 |
107.5 |
111.0 |
| CBS |
CBR |
NBO |
118.5 |
109.4 |
| CBR |
CBS |
CBX |
121.5 |
120.0 |
| CBR |
CBS |
CBT |
117.3 |
120.0 |
| CBS |
CBR |
H39 |
107.2 |
109.5 |
| CBS |
CBR |
H40 |
107.2 |
109.5 |
| NBO |
CBR |
H39 |
107.1 |
109.5 |
| NBO |
CBR |
H40 |
107.1 |
109.4 |
| CBR |
NBO |
H2 |
107.6 |
111.0 |
| CBT |
CBS |
CBX |
120.7 |
120.0 |
| CBS |
CBX |
CBW |
119.4 |
120.0 |
| CBS |
CBX |
H43 |
120.3 |
120.0 |
| CBS |
CBT |
CBU |
120.2 |
120.0 |
| CBS |
CBT |
H41 |
119.9 |
120.0 |
| CBT |
CBU |
CBV |
118.9 |
120.0 |
| CBT |
CBU |
CBZ |
120.4 |
120.0 |
| CBU |
CBT |
H41 |
119.9 |
120.0 |
| CBV |
CBU |
CBZ |
120.7 |
120.0 |
| CBU |
CBV |
CBW |
121.1 |
120.0 |
| CBU |
CBV |
H42 |
119.5 |
120.0 |
| CBU |
CBZ |
FCD |
113.2 |
109.5 |
| CBU |
CBZ |
FCE |
109.1 |
109.4 |
| CBU |
CBZ |
FCF |
108.1 |
109.5 |
| CBV |
CBW |
CBX |
119.5 |
120.0 |
| CBV |
CBW |
CBY |
120.2 |
120.1 |
| CBW |
CBV |
H42 |
119.4 |
119.9 |
| CBX |
CBW |
CBY |
120.4 |
119.9 |
| CBW |
CBX |
H43 |
120.3 |
120.0 |
| CBW |
CBY |
FCB |
110.1 |
109.5 |
| CBW |
CBY |
FCC |
110.7 |
109.5 |
| CBW |
CBY |
FCA |
109.2 |
109.5 |
| FCB |
CBY |
FCC |
108.6 |
109.5 |
| FCA |
CBY |
FCB |
108.7 |
109.4 |
| FCA |
CBY |
FCC |
109.5 |
109.5 |
| FCD |
CBZ |
FCE |
107.8 |
109.5 |
| FCD |
CBZ |
FCF |
107.8 |
109.5 |
| FCE |
CBZ |
FCF |
110.8 |
109.4 |
| H36 |
CBQ |
H37 |
109.5 |
109.5 |
| H36 |
CBQ |
H38 |
109.5 |
109.5 |
| H37 |
CBQ |
H38 |
109.5 |
109.5 |
| H39 |
CBR |
H40 |
109.5 |
109.5 |
Torsion Angles for OXJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CBS |
CBR |
NBO |
CBQ |
272.4 |
180.0 |
| CBQ |
NBO |
CBR |
H39 |
151.1 |
60.0 |
| CBQ |
NBO |
CBR |
H40 |
33.7 |
300.0 |
| CBR |
NBO |
CBQ |
H2 |
238.9 |
236.0 |
| H36 |
CBQ |
NBO |
H37 |
240.0 |
240.0 |
| H36 |
CBQ |
NBO |
H38 |
120.0 |
120.0 |
| H37 |
CBQ |
NBO |
H38 |
240.0 |
240.0 |
| CBQ |
NBO |
CBR |
CBS |
272.4 |
180.0 |
| NBO |
CBR |
CBS |
H39 |
238.7 |
240.0 |
| NBO |
CBR |
CBS |
H40 |
121.3 |
119.9 |
| CBS |
CBR |
NBO |
H2 |
151.3 |
56.1 |
| CBT |
CBS |
CBR |
CBX |
188.3 |
180.2 |
| CBR |
CBS |
CBX |
CBW |
183.9 |
179.8 |
| CBR |
CBS |
CBX |
H43 |
3.9 |
359.9 |
| CBR |
CBS |
CBT |
CBU |
176.6 |
180.1 |
| CBR |
CBS |
CBT |
H41 |
356.6 |
0.1 |
| H39 |
CBR |
CBS |
H40 |
242.6 |
239.9 |
| CBR |
NBO |
CBQ |
H36 |
180.0 |
180.0 |
| CBR |
NBO |
CBQ |
H37 |
300.0 |
300.0 |
| CBR |
NBO |
CBQ |
H38 |
60.0 |
60.0 |
| CBQ |
NBO |
CBR |
H2 |
121.1 |
124.0 |
| NBO |
CBR |
CBS |
CBX |
297.5 |
90.0 |
| NBO |
CBR |
CBS |
CBT |
125.8 |
270.2 |
| CBS |
CBR |
NBO |
H39 |
121.3 |
120.0 |
| CBS |
CBR |
NBO |
H40 |
238.7 |
240.0 |
| H39 |
CBR |
NBO |
H40 |
117.4 |
120.0 |
| CBX |
CBS |
CBR |
NBO |
297.5 |
90.0 |
| CBR |
CBS |
CBX |
CBT |
188.6 |
180.2 |
| CBX |
CBS |
CBR |
H39 |
58.8 |
210.0 |
| CBX |
CBS |
CBR |
H40 |
176.2 |
330.1 |
| CBX |
CBS |
CBT |
CBU |
4.9 |
0.2 |
| CBX |
CBS |
CBT |
H41 |
184.8 |
180.2 |
| CBV |
CBW |
CBX |
CBS |
3.0 |
0.4 |
| CBS |
CBX |
CBW |
CBY |
182.5 |
180.2 |
| CBW |
CBX |
CBS |
H43 |
180.0 |
179.9 |
| CBT |
CBS |
CBR |
NBO |
125.8 |
270.2 |
| CBR |
CBS |
CBT |
CBX |
171.7 |
179.8 |
| CBT |
CBS |
CBR |
H39 |
247.1 |
30.2 |
| CBT |
CBS |
CBR |
H40 |
4.5 |
150.3 |
| CBT |
CBS |
CBX |
CBW |
355.3 |
359.6 |
| CBT |
CBS |
CBX |
H43 |
175.3 |
179.7 |
| CBS |
CBT |
CBU |
CBV |
356.7 |
360.0 |
| CBS |
CBT |
CBU |
CBZ |
177.7 |
180.0 |
| CBU |
CBT |
CBS |
H41 |
180.0 |
180.0 |
| CBU |
CBT |
CBS |
CBX |
4.9 |
0.2 |
| CBS |
CBT |
CBU |
H41 |
180.0 |
180.0 |
| CBV |
CBU |
CBT |
CBZ |
179.0 |
179.9 |
| CBT |
CBU |
CBV |
CBW |
1.7 |
-0.0 |
| CBT |
CBU |
CBV |
H42 |
181.7 |
180.0 |
| CBT |
CBU |
CBZ |
FCD |
263.5 |
90.0 |
| CBT |
CBU |
CBZ |
FCE |
143.4 |
210.0 |
| CBT |
CBU |
CBZ |
FCF |
22.9 |
329.9 |
| CBT |
CBU |
CBV |
CBZ |
181.0 |
180.1 |
| CBV |
CBU |
CBT |
H41 |
176.7 |
180.0 |
| CBV |
CBU |
CBZ |
FCD |
84.5 |
270.0 |
| CBV |
CBU |
CBZ |
FCE |
324.4 |
30.0 |
| CBV |
CBU |
CBZ |
FCF |
203.8 |
150.0 |
| CBU |
CBV |
CBW |
CBX |
358.4 |
359.8 |
| CBU |
CBV |
CBW |
CBY |
179.0 |
180.0 |
| CBW |
CBV |
CBU |
H42 |
180.0 |
180.0 |
| CBT |
CBU |
CBZ |
CBV |
179.0 |
179.9 |
| CBZ |
CBU |
CBT |
H41 |
357.7 |
0.0 |
| CBZ |
CBU |
CBV |
CBW |
180.7 |
179.9 |
| CBZ |
CBU |
CBV |
H42 |
0.7 |
360.0 |
| FCD |
CBZ |
CBU |
FCE |
120.0 |
240.0 |
| FCD |
CBZ |
CBU |
FCF |
240.6 |
120.1 |
| FCE |
CBZ |
CBU |
FCF |
120.6 |
240.1 |
| CBS |
CBX |
CBW |
CBV |
3.0 |
0.4 |
| CBW |
CBV |
CBU |
CBZ |
180.7 |
179.9 |
| CBU |
CBV |
CBW |
H42 |
180.0 |
180.0 |
| CBX |
CBW |
CBV |
CBY |
179.5 |
179.9 |
| CBV |
CBW |
CBX |
H43 |
183.1 |
180.3 |
| CBV |
CBW |
CBY |
FCB |
248.4 |
360.0 |
| CBV |
CBW |
CBY |
FCC |
8.5 |
120.0 |
| CBV |
CBW |
CBY |
FCA |
129.1 |
240.0 |
| CBS |
CBX |
CBW |
H43 |
180.0 |
180.1 |
| CBV |
CBW |
CBX |
CBY |
180.6 |
180.1 |
| CBX |
CBW |
CBV |
H42 |
178.4 |
179.8 |
| CBX |
CBW |
CBY |
FCB |
68.9 |
180.1 |
| CBX |
CBW |
CBY |
FCC |
189.0 |
300.1 |
| CBX |
CBW |
CBY |
FCA |
309.6 |
60.2 |
| CBV |
CBW |
CBY |
CBX |
179.4 |
179.9 |
| CBY |
CBW |
CBV |
H42 |
359.0 |
360.0 |
| CBY |
CBW |
CBX |
H43 |
2.5 |
0.1 |
| FCB |
CBY |
CBW |
FCC |
239.9 |
240.0 |
| FCA |
CBY |
CBW |
FCB |
240.7 |
240.0 |
| FCA |
CBY |
CBW |
FCC |
120.6 |
120.0 |
| CBW |
CBY |
FCB |
FCC |
121.3 |
120.0 |
| CBW |
CBY |
FCB |
FCA |
240.4 |
240.0 |
| FCA |
CBY |
FCB |
FCC |
240.9 |
240.0 |
| CBW |
CBY |
FCC |
FCB |
239.0 |
240.0 |
| CBW |
CBY |
FCC |
FCA |
120.4 |
120.1 |
| FCA |
CBY |
FCC |
FCB |
118.6 |
119.9 |
| CBW |
CBY |
FCA |
FCB |
120.2 |
120.0 |
| CBW |
CBY |
FCA |
FCC |
238.7 |
239.9 |
| FCB |
CBY |
FCA |
FCC |
118.5 |
120.0 |
| CBU |
CBZ |
FCD |
FCE |
239.2 |
119.9 |
| CBU |
CBZ |
FCD |
FCF |
119.6 |
239.9 |
| FCE |
CBZ |
FCD |
FCF |
240.3 |
120.0 |
| CBU |
CBZ |
FCE |
FCD |
123.3 |
240.0 |
| CBU |
CBZ |
FCE |
FCF |
241.1 |
120.0 |
| FCD |
CBZ |
FCE |
FCF |
117.8 |
240.0 |
| CBU |
CBZ |
FCF |
FCD |
237.3 |
120.1 |
| CBU |
CBZ |
FCF |
FCE |
119.5 |
240.1 |
| FCD |
CBZ |
FCF |
FCE |
242.2 |
120.0 |
| H36 |
CBQ |
NBO |
CBR |
180.0 |
180.0 |
| NBO |
CBQ |
H36 |
H37 |
120.0 |
120.0 |
| NBO |
CBQ |
H36 |
H38 |
240.0 |
240.0 |
| H36 |
CBQ |
NBO |
H2 |
301.1 |
304.0 |
| H37 |
CBQ |
H36 |
H38 |
120.0 |
120.0 |
| H37 |
CBQ |
NBO |
CBR |
300.0 |
300.0 |
| NBO |
CBQ |
H37 |
H36 |
240.0 |
240.0 |
| NBO |
CBQ |
H37 |
H38 |
120.0 |
120.0 |
| H37 |
CBQ |
NBO |
H2 |
61.1 |
64.0 |
| H36 |
CBQ |
H37 |
H38 |
240.0 |
240.0 |
| H38 |
CBQ |
NBO |
CBR |
60.0 |
60.0 |
| NBO |
CBQ |
H38 |
H36 |
120.0 |
120.0 |
| NBO |
CBQ |
H38 |
H37 |
240.0 |
240.0 |
| H38 |
CBQ |
NBO |
H2 |
181.1 |
184.0 |
| H36 |
CBQ |
H38 |
H37 |
120.0 |
120.0 |
| CBS |
CBR |
H39 |
NBO |
231.8 |
240.0 |
| H39 |
CBR |
CBS |
CBX |
58.8 |
210.0 |
| H39 |
CBR |
CBS |
CBT |
247.1 |
30.2 |
| CBS |
CBR |
H39 |
H40 |
115.9 |
120.0 |
| NBO |
CBR |
H39 |
H40 |
244.1 |
240.0 |
| H39 |
CBR |
NBO |
H2 |
30.0 |
296.1 |
| CBS |
CBR |
H40 |
NBO |
128.2 |
119.9 |
| H40 |
CBR |
CBS |
CBX |
176.2 |
330.1 |
| H40 |
CBR |
CBS |
CBT |
4.5 |
150.3 |
| CBS |
CBR |
H40 |
H39 |
244.1 |
240.0 |
| NBO |
CBR |
H40 |
H39 |
115.9 |
120.0 |
| H40 |
CBR |
NBO |
H2 |
272.6 |
176.0 |
| H41 |
CBT |
CBS |
CBX |
184.8 |
180.2 |
| CBS |
CBT |
H41 |
CBU |
180.0 |
180.0 |
| H41 |
CBT |
CBU |
CBV |
176.7 |
180.0 |
| H41 |
CBT |
CBU |
CBZ |
357.7 |
0.0 |
| H42 |
CBV |
CBU |
CBZ |
0.7 |
360.0 |
| CBU |
CBV |
H42 |
CBW |
180.0 |
180.0 |
| H42 |
CBV |
CBW |
CBX |
178.4 |
179.8 |
| H42 |
CBV |
CBW |
CBY |
359.0 |
360.0 |
| CBS |
CBX |
H43 |
CBW |
180.0 |
179.9 |
| H43 |
CBX |
CBW |
CBY |
2.5 |
0.1 |
| CBQ |
NBO |
H2 |
CBR |
233.0 |
236.0 |
| H2 |
NBO |
CBQ |
H36 |
301.1 |
304.0 |
| H2 |
NBO |
CBQ |
H37 |
61.1 |
64.0 |
| H2 |
NBO |
CBQ |
H38 |
181.1 |
184.0 |
| H2 |
NBO |
CBR |
H39 |
30.0 |
296.1 |
| H2 |
NBO |
CBR |
H40 |
272.6 |
176.0 |