PDB Chemical Component OX2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for OX2

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.567	1.531
C1	O5	1.467	1.426
C1	C7	1.526	1.507
C1	H1	1.115	1.090
C2	O2	1.443	1.429
C2	C3	1.551	1.533
C2	H2	1.115	1.090
O2	HO2	0.950	0.967
C3	O3	1.445	1.429
C3	C4	1.546	1.532
C3	H3	1.115	1.090
O3	HO3	0.950	0.968
C4	O4	1.448	1.429
C4	C5	1.554	1.530
C4	H4	1.115	1.090
O4	HO4	0.950	0.967
C5	O5	1.460	1.425
C5	C6	1.562	1.530
C5	H5	1.115	1.091
C6	O6	1.451	1.429
C6	H61	1.115	1.090
C6	H62	1.115	1.090
O6	HO6	0.950	0.967
N1	N2	1.347	1.287
N1	C8	1.244	1.303
N2	C7	1.318	1.303
C7	O7	1.390	1.343
O7	C8	1.328	1.344
C8	C9	1.497	1.507
C9	H91	1.115	1.090
C9	H92	1.115	1.090
C9	H93	1.115	1.090

Bond Angles for OX2

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O5	110.9	109.7
C2	C1	C7	110.8	109.4
C2	C1	H1	107.3	109.4
C1	C2	O2	111.5	109.6
C1	C2	C3	108.2	109.0
C1	C2	H2	109.0	109.6
O5	C1	C7	108.6	109.5
O5	C1	H1	109.6	109.4
C1	O5	C5	112.0	107.6
C7	C1	H1	109.6	109.4
C1	C7	N2	121.7	126.3
C1	C7	O7	125.2	126.3
O2	C2	C3	109.3	109.5
O2	C2	H2	107.7	109.6
C2	O2	HO2	111.5	106.8
C3	C2	H2	111.1	109.5
C2	C3	O3	111.7	109.7
C2	C3	C4	109.6	108.6
C2	C3	H3	108.0	109.7
O3	C3	C4	109.8	109.6
O3	C3	H3	107.8	109.6
C3	O3	HO3	111.7	106.8
C4	C3	H3	110.0	109.6
C3	C4	O4	110.7	109.7
C3	C4	C5	109.7	109.0
C3	C4	H4	108.6	109.5
O4	C4	C5	109.8	109.6
O4	C4	H4	108.5	109.5
C4	O4	HO4	110.7	106.8
C5	C4	H4	109.5	109.5
C4	C5	O5	111.8	109.8
C4	C5	C6	111.3	109.4
C4	C5	H5	106.4	109.4
O5	C5	C6	109.0	109.4
O5	C5	H5	108.9	109.4
C6	C5	H5	109.3	109.3
C5	C6	O6	110.3	109.5
C5	C6	H61	111.9	109.5
C5	C6	H62	111.9	109.4
O6	C6	H61	111.9	109.5
O6	C6	H62	111.9	109.5
C6	O6	HO6	110.3	106.8
H61	C6	H62	98.5	109.4
N2	N1	C8	110.7	109.3
N1	N2	C7	102.6	109.4
N1	C8	O7	113.9	107.5
N1	C8	C9	126.4	126.2
N2	C7	O7	113.1	107.5
C7	O7	C8	99.7	106.3
O7	C8	C9	119.7	126.3
C8	C9	H91	106.2	109.5
C8	C9	H92	126.4	109.5
C8	C9	H93	106.2	109.4
H91	C9	H92	106.2	109.5
H91	C9	H93	103.2	109.5
H92	C9	H93	106.3	109.4

Torsion Angles for OX2

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C1	C2	C7	239.3	239.9
O5	C1	C2	H1	119.7	120.0
C2	C1	O5	C5	300.1	292.4
C7	C1	C2	H1	240.3	240.1
C2	C1	C7	N2	126.4	284.8
C2	C1	C7	O7	305.8	104.9
O2	C2	C1	C3	120.3	119.9
O2	C2	C1	H2	241.2	239.7
C1	C2	O2	HO2	180.0	60.5
C3	C2	C1	H2	120.9	119.9
C1	C2	C3	O3	180.7	186.4
C1	C2	C3	C4	302.6	306.2
C1	C2	C3	H3	62.4	66.0
C2	C1	O5	C7	122.0	120.1
C2	C1	O5	H1	241.7	240.0
O5	C1	C2	O2	179.3	181.2
O5	C1	C2	C3	59.0	61.3
O5	C1	C2	H2	298.1	301.4
C7	C1	O5	H1	119.7	119.9
O5	C1	C7	N2	248.4	45.1
O5	C1	C7	O7	67.9	225.2
C4	C5	O5	C1	58.1	67.6
C1	O5	C5	C6	181.6	187.7
C1	O5	C5	H5	300.8	307.5
C2	C1	C7	O5	238.0	239.7
C2	C1	C7	H1	118.3	119.8
C7	C1	C2	O2	300.0	301.3
C7	C1	C2	C3	179.7	181.4
C7	C1	C2	H2	58.8	61.6
O5	C1	C7	H1	240.3	240.1
C7	C1	O5	C5	178.1	172.3
N1	N2	C7	C1	179.6	179.8
N2	C7	C1	O7	180.5	179.9
C1	C7	O7	C8	180.5	180.0
C2	C1	H1	O5	120.5	120.2
C2	C1	H1	C7	239.6	240.2
H1	C1	C2	O2	59.7	61.1
H1	C1	C2	C3	299.4	301.3
H1	C1	C2	H2	178.5	181.4
O5	C1	H1	C7	119.1	120.0
H1	C1	O5	C5	58.4	52.4
H1	C1	C7	N2	8.1	165.0
H1	C1	C7	O7	187.6	345.1
O2	C2	C1	O5	179.3	181.2
O2	C2	C1	C7	300.0	301.3
O2	C2	C1	H1	59.7	61.1
C1	C2	O2	C3	240.4	240.5
C1	C2	O2	H2	119.5	120.3
C3	C2	O2	H2	239.1	239.8
O2	C2	C3	O3	59.1	66.5
O2	C2	C3	C4	180.9	186.3
O2	C2	C3	H3	300.7	306.1
C3	C2	C1	O5	59.0	61.3
C3	C2	C1	C7	179.7	181.4
C3	C2	C1	H1	299.4	301.3
C1	C2	C3	O2	121.6	119.9
C1	C2	C3	H2	240.4	240.1
O2	C2	C3	H2	118.8	120.2
C3	C2	O2	HO2	299.6	180.0
O3	C3	C2	C4	238.1	240.2
O3	C3	C2	H3	118.4	120.4
C2	C3	O3	HO3	180.0	299.2
C4	C3	C2	H3	240.2	240.2
C2	C3	C4	O4	177.5	173.7
C2	C3	C4	C5	56.2	53.7
C2	C3	C4	H4	296.5	293.9
H2	C2	C1	O5	298.1	301.4
H2	C2	C1	C7	58.8	61.6
H2	C2	C1	H1	178.5	181.4
C1	C2	H2	O2	238.8	239.7
C1	C2	H2	C3	119.1	119.5
O2	C2	H2	C3	240.2	239.8
H2	C2	O2	HO2	60.5	300.2
H2	C2	C3	O3	300.3	306.3
H2	C2	C3	C4	62.1	66.1
H2	C2	C3	H3	181.9	185.9
HO2	O2	C2	C3	299.6	180.0
HO2	O2	C2	H2	60.5	300.2
O3	C3	C2	H2	300.3	306.3
C2	C3	O3	C4	121.8	119.2
C2	C3	O3	H3	241.5	239.5
C4	C3	O3	H3	119.8	120.3
O3	C3	C4	O4	300.6	293.6
O3	C3	C4	C5	179.2	173.6
O3	C3	C4	H4	59.5	53.8
C4	C3	C2	H2	62.1	66.1
C2	C3	C4	O3	237.0	240.1
C2	C3	C4	H3	118.6	119.8
O3	C3	C4	H3	241.6	239.7
C4	C3	O3	HO3	58.2	180.0
O4	C4	C3	C5	121.4	120.0
O4	C4	C3	H4	241.0	239.8
C3	C4	O4	HO4	180.0	60.4
C5	C4	C3	H4	119.6	119.8
C3	C4	C5	O5	304.0	298.8
C3	C4	C5	C6	181.9	178.7
C3	C4	C5	H5	62.8	58.9
H3	C3	C2	H2	181.9	185.9
C2	C3	H3	O3	120.8	120.5
C2	C3	H3	C4	240.5	240.8
O3	C3	H3	C4	119.6	120.3
H3	C3	O3	HO3	298.4	59.7
H3	C3	C4	O4	59.0	53.9
H3	C3	C4	C5	297.6	293.9
H3	C3	C4	H4	178.0	174.1
HO3	O3	C3	C4	58.2	180.0
HO3	O3	C3	H3	298.4	59.7
O4	C4	C3	H3	59.0	53.9
C3	C4	O4	C5	238.7	240.4
C3	C4	O4	H4	119.1	120.2
C5	C4	O4	H4	240.4	239.9
O4	C4	C5	O5	182.2	178.8
O4	C4	C5	C6	60.0	58.6
O4	C4	C5	H5	301.0	298.9
C1	O5	C5	C4	58.1	67.6
C5	C4	C3	H3	297.6	293.9
C3	C4	C5	O4	121.9	120.0
C3	C4	C5	H4	240.9	240.2
O4	C4	C5	H4	119.0	120.1
C5	C4	O4	HO4	301.3	180.0
O5	C5	C4	C6	122.2	120.1
O5	C5	C4	H5	241.2	239.9
C6	C5	C4	H5	119.1	119.8
C4	C5	C6	O6	49.5	185.3
C4	C5	C6	H61	284.2	305.4
C4	C5	C6	H62	174.8	65.3
H4	C4	C3	H3	178.0	174.1
C3	C4	H4	O4	239.7	239.7
C3	C4	H4	C5	119.8	119.5
O4	C4	H4	C5	240.1	239.8
H4	C4	O4	HO4	60.9	300.1
H4	C4	C5	O5	63.2	58.6
H4	C4	C5	C6	301.0	298.5
H4	C4	C5	H5	181.9	178.8
HO4	O4	C4	C5	301.3	180.0
HO4	O4	C4	H4	60.9	300.1
C5	O5	C1	C7	178.1	172.3
C5	O5	C1	H1	58.4	52.4
O5	C5	C4	H4	63.2	58.6
C4	C5	O5	C6	236.5	239.9
C4	C5	O5	H5	117.3	120.1
C6	C5	O5	H5	240.8	240.2
O5	C5	C6	O6	285.8	64.9
O5	C5	C6	H61	160.5	185.0
O5	C5	C6	H62	51.0	305.0
C6	C5	C4	H4	301.0	298.5
C4	C5	C6	O5	123.7	120.4
C4	C5	C6	H5	242.7	240.2
O5	C5	C6	H5	119.0	119.8
O6	C6	C5	H61	125.3	239.9
O6	C6	C5	H62	234.7	120.0
C5	C6	O6	HO6	180.0	180.0
H61	C6	C5	H62	109.5	240.0
H5	C5	C4	H4	181.9	178.8
C4	C5	H5	O5	239.4	239.6
C4	C5	H5	C6	120.4	119.8
O5	C5	H5	C6	241.0	240.2
H5	C5	C6	O6	166.8	305.1
H5	C5	C6	H61	41.5	65.2
H5	C5	C6	H62	292.1	185.1
O6	C6	C5	H5	166.8	305.1
C5	C6	O6	H61	234.7	120.1
C5	C6	O6	H62	125.2	240.0
H61	C6	O6	H62	250.5	120.0
H61	C6	C5	H5	41.5	65.2
C5	C6	H61	O6	124.4	239.9
C5	C6	H61	H62	242.2	120.0
O6	C6	H61	H62	117.8	240.0
H61	C6	O6	HO6	305.3	59.9
H62	C6	C5	H5	292.1	185.1
C5	C6	H62	O6	235.6	120.0
C5	C6	H62	H61	117.8	240.0
O6	C6	H62	H61	242.2	120.0
H62	C6	O6	HO6	54.7	300.0
HO6	O6	C6	H61	305.3	59.9
HO6	O6	C6	H62	54.7	300.0
C1	C7	N2	N1	179.6	179.8
N2	N1	C8	O7	0.1	359.6
N2	N1	C8	C9	179.9	179.8
N1	N2	C7	O7	0.1	359.7
C8	N1	N2	C7	359.9	0.4
C7	O7	C8	N1	359.9	0.2
O7	C8	N1	C9	180.2	179.8
N1	C8	C9	H91	54.7	269.7
N1	C8	C9	H92	180.0	29.8
N1	C8	C9	H93	305.3	149.7
N2	C7	C1	H1	8.1	165.0
C1	C7	N2	O7	179.5	180.1
C7	N2	N1	C8	359.9	0.4
N2	C7	O7	C8	0.0	0.0
O7	C7	C1	H1	187.6	345.1
C1	C7	O7	N2	180.5	179.9
N1	C8	O7	C7	359.9	0.2
C7	O7	C8	C9	180.1	180.0
N1	C8	O7	C9	179.8	180.2
O7	C8	C9	H91	234.5	89.9
O7	C8	C9	H92	359.8	210.0
O7	C8	C9	H93	125.0	329.9
N1	C8	C9	O7	180.2	179.8
H91	C9	C8	H92	234.7	239.9
H91	C9	C8	H93	109.5	120.0
H92	C9	C8	H93	234.7	240.1
C8	C9	H91	H92	136.8	120.0
C8	C9	H91	H93	248.4	240.0
H92	C9	H91	H93	111.6	120.0
C8	C9	H92	H91	234.7	240.0
C8	C9	H92	H93	125.3	119.9
H91	C9	H92	H93	250.5	240.0
C8	C9	H93	H91	111.6	120.0
C8	C9	H93	H92	223.2	240.0
H91	C9	H93	H92	111.6	120.0