PDB Chemical Component OTS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for OTS

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C3 1.410 1.381
C2 C1 1.401 1.382
C2 H2 1.103 1.081
C3 C4 1.401 1.387
C3 H3 1.103 1.080
C4 O4 1.348 1.359
C4 C5 1.386 1.387
O4 HO4 0.950 0.966
C5 C6 1.398 1.381
C5 H5 1.103 1.080
C6 C1 1.393 1.381
C6 H6 1.103 1.080
C1 C7 1.565 1.508
C7 O7 1.442 1.429
C7 C8 1.513 1.529
C7 H7 1.115 1.090
O7 HO7 0.951 0.967
C8 N8 1.482 1.469
C8 H81 1.115 1.089
C8 H82 1.115 1.090
N8 HN81 1.020 1.009
N8 HN82 1.020 1.008

Bond Angles for OTS

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C3 C2 C1 119.8 120.0
C3 C2 H2 120.4 120.0
C2 C3 C4 120.4 120.0
C2 C3 H3 120.1 120.0
C1 C2 H2 119.8 120.0
C2 C1 C6 118.6 120.2
C2 C1 C7 122.8 119.9
C4 C3 H3 119.4 120.0
C3 C4 O4 121.0 120.1
C3 C4 C5 119.8 119.9
O4 C4 C5 119.2 120.1
C4 O4 HO4 121.0 106.8
C4 C5 C6 119.4 120.0
C4 C5 H5 119.9 120.0
C6 C5 H5 120.7 120.0
C5 C6 C1 122.0 120.0
C5 C6 H6 119.2 120.0
C1 C6 H6 118.9 120.0
C6 C1 C7 118.7 119.9
C1 C7 O7 110.4 109.5
C1 C7 C8 111.1 109.5
C1 C7 H7 106.5 109.5
O7 C7 C8 105.7 109.5
O7 C7 H7 112.0 109.5
C7 O7 HO7 110.4 106.8
C8 C7 H7 111.2 109.5
C7 C8 N8 108.4 109.5
C7 C8 H81 112.6 109.5
C7 C8 H82 112.6 109.5
N8 C8 H81 112.6 109.5
N8 C8 H82 112.6 109.5
C8 N8 HN81 112.6 106.7
C8 N8 HN82 108.4 106.8
H81 C8 H82 97.8 109.4
HN81 N8 HN82 112.6 106.7

Torsion Angles for OTS

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1 C2 C3 H2 180.0 180.0
C3 C2 C1 C6 0.5 0.3
C3 C2 C1 C7 179.8 180.0
C4 C3 C2 H3 180.0 179.9
C2 C3 C4 O4 180.2 180.0
C2 C3 C4 C5 359.5 0.1
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 0.1 359.9
C1 C2 C3 H3 180.1 180.0
C5 C6 C1 C2 359.3 359.4
C2 C1 C6 H6 179.3 179.9
C6 C1 C2 C7 180.7 180.3
C2 C1 C7 O7 84.2 210.0
C2 C1 C7 C8 327.2 90.0
C2 C1 C7 H7 205.9 330.0
C3 C2 H2 C1 180.0 180.0
H2 C2 C3 C4 180.1 179.9
H2 C2 C3 H3 0.1 360.0
H2 C2 C1 C6 180.5 180.3
H2 C2 C1 C7 359.8 0.0
C4 C3 C2 C1 0.1 359.9
C4 C3 C2 H2 180.1 179.9
C2 C3 C4 H3 180.0 180.1
O4 C4 C3 C5 180.7 180.0
C3 C4 O4 HO4 180.0 90.0
C3 C4 C5 C6 0.3 359.7
C3 C4 C5 H5 180.2 180.0
H3 C3 C2 C1 180.1 180.0
H3 C3 C2 H2 0.1 360.0
C2 C3 H3 C4 180.0 179.9
H3 C3 C4 O4 0.2 360.0
H3 C3 C4 C5 179.5 180.0
O4 C4 C3 H3 0.2 360.0
C3 C4 O4 C5 179.3 180.0
O4 C4 C5 C6 179.6 179.7
O4 C4 C5 H5 359.6 0.0
C5 C4 C3 H3 179.5 180.0
C3 C4 C5 O4 180.7 180.0
C5 C4 O4 HO4 0.7 269.9
C6 C5 C4 H5 180.0 179.7
C4 C5 C6 C1 0.3 0.6
C4 C5 C6 H6 180.3 180.1
HO4 O4 C4 C5 0.7 269.9
C2 C1 C6 C5 359.3 359.4
C4 C5 C6 H5 180.0 180.3
C1 C6 C5 H6 180.0 180.5
C5 C6 C1 C7 180.0 179.7
C4 C5 H5 C6 180.0 179.7
H5 C5 C6 C1 180.3 180.3
H5 C5 C6 H6 0.4 359.8
C6 C1 C2 H2 180.5 180.3
C2 C1 C6 C7 179.4 179.7
C1 C6 C5 H5 180.3 180.3
C5 C6 C1 H6 180.0 179.5
C6 C1 C7 O7 263.5 29.7
C6 C1 C7 C8 146.5 269.7
C6 C1 C7 H7 25.3 149.7
H6 C6 C5 H5 0.4 359.8
C5 C6 H6 C1 180.0 180.5
H6 C6 C1 C7 359.9 0.2
C7 C1 C2 H2 359.8 0.0
C2 C1 C7 C6 180.7 180.3
C7 C1 C6 H6 359.9 0.2
O7 C7 C1 C8 117.0 120.0
O7 C7 C1 H7 238.2 240.0
C1 C7 O7 HO7 180.0 300.0
C8 C7 C1 H7 121.3 120.0
C1 C7 C8 N8 261.3 180.0
C1 C7 C8 H81 136.1 59.9
C1 C7 C8 H82 26.6 300.0
C1 C7 O7 C8 239.7 240.0
C1 C7 O7 H7 118.5 120.0
C8 C7 O7 H7 238.8 240.0
O7 C7 C8 N8 141.5 60.0
O7 C7 C8 H81 16.3 300.0
O7 C7 C8 H82 266.8 180.0
C1 C7 C8 O7 119.8 120.0
C1 C7 C8 H7 241.5 240.0
O7 C7 C8 H7 121.7 120.0
C8 C7 O7 HO7 300.3 59.9
N8 C8 C7 H81 125.3 120.0
N8 C8 C7 H82 234.8 240.0
C7 C8 N8 HN81 54.7 179.9
C7 C8 N8 HN82 180.0 293.8
H81 C8 C7 H82 109.5 119.9
C1 C7 H7 O7 239.2 240.0
C1 C7 H7 C8 121.2 120.0
O7 C7 H7 C8 242.0 240.0
H7 C7 O7 HO7 61.5 180.0
H7 C7 C8 N8 19.8 300.0
H7 C7 C8 H81 254.6 180.0
H7 C7 C8 H82 145.1 60.0
HO7 O7 C7 C8 300.3 59.9
HO7 O7 C7 H7 61.5 180.0
N8 C8 C7 H7 19.8 300.0
C7 C8 N8 H81 234.7 240.0
C7 C8 N8 H82 125.3 120.0
H81 C8 N8 H82 250.5 240.1
HN81 N8 C8 HN82 234.7 246.2
H81 C8 C7 H7 254.6 180.0
C7 C8 H81 N8 123.0 120.0
C7 C8 H81 H82 241.4 240.0
N8 C8 H81 H82 118.5 120.0
H81 C8 N8 HN81 180.0 300.0
H81 C8 N8 HN82 305.3 53.8
H82 C8 C7 H7 145.1 60.0
C7 C8 H82 N8 237.0 240.0
C7 C8 H82 H81 118.5 120.0
N8 C8 H82 H81 241.5 240.0
H82 C8 N8 HN81 289.4 59.9
H82 C8 N8 HN82 54.8 173.7
HN81 N8 C8 H81 180.0 300.0
HN81 N8 C8 H82 289.4 59.9
C8 N8 HN81 HN82 123.0 113.8
HN82 N8 C8 H81 305.3 53.8
HN82 N8 C8 H82 54.8 173.7
C8 N8 HN82 HN81 234.7 246.2