PDB Chemical Component OSP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for OSP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O3	S2	1.445	1.421
S2	C7	1.663	1.820
S2	O4	1.444	1.421
S2	N2	1.545	1.664
C7	C8	1.533	1.532
C7	H71	1.100	1.089
C7	H72	1.100	1.091
C8	C9	1.529	1.527
C8	H81	1.100	1.090
C8	H82	1.100	1.090
C9	C10	1.524	1.527
C9	H91	1.100	1.090
C9	H92	1.100	1.089
C10	N2	1.459	1.470
C10	H101	1.101	1.090
C10	H102	1.100	1.090
N2	C4	1.415	1.397
C4	C3	1.395	1.389
C4	C5	1.398	1.389
C3	C2	1.400	1.381
C3	H3	1.079	1.080
C2	C1	1.405	1.383
C2	H2	1.080	1.080
C5	C6	1.399	1.381
C5	H5	1.080	1.081
C6	C1	1.404	1.383
C6	H6	1.079	1.080
C1	S1	1.626	1.761
S1	N1	1.593	1.656
S1	O1	1.436	1.422
S1	O2	1.437	1.421
N1	HN11	1.000	0.970
N1	HN12	1.000	0.970

Bond Angles for OSP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O3	S2	C7	112.6	110.8
O3	S2	O4	105.4	121.3
O3	S2	N2	112.7	104.5
O4	S2	C7	108.1	110.7
C7	S2	N2	110.0	102.9
S2	C7	C8	111.0	108.4
S2	C7	H71	109.0	109.7
S2	C7	H72	108.6	109.6
O4	S2	N2	107.7	104.6
S2	N2	C10	120.5	118.0
S2	N2	C4	121.7	120.9
C8	C7	H71	108.9	109.7
C8	C7	H72	108.6	109.7
C7	C8	C9	113.7	109.8
C7	C8	H81	108.1	109.4
C7	C8	H82	107.2	109.5
H71	C7	H72	110.7	109.7
C9	C8	H81	108.1	109.4
C9	C8	H82	107.1	109.5
C8	C9	C10	112.8	110.6
C8	C9	H91	108.4	109.2
C8	C9	H92	107.6	109.3
H81	C8	H82	112.8	109.3
C10	C9	H91	108.4	109.2
C10	C9	H92	107.6	109.3
C9	C10	N2	106.0	109.5
C9	C10	H101	110.6	109.5
C9	C10	H102	111.4	109.5
H91	C9	H92	112.1	109.2
N2	C10	H101	110.6	109.4
N2	C10	H102	111.4	109.5
C10	N2	C4	117.7	121.0
H101	C10	H102	106.9	109.4
N2	C4	C3	118.1	120.0
N2	C4	C5	122.4	120.1
C3	C4	C5	119.4	119.9
C4	C3	C2	120.1	119.9
C4	C3	H3	120.0	120.1
C4	C5	C6	120.4	119.9
C4	C5	H5	119.8	120.0
C2	C3	H3	119.9	120.0
C3	C2	C1	121.0	120.1
C3	C2	H2	119.5	120.0
C1	C2	H2	119.4	119.9
C2	C1	C6	118.3	120.1
C2	C1	S1	119.8	120.0
C6	C5	H5	119.8	120.0
C5	C6	C1	120.7	120.1
C5	C6	H6	119.7	119.9
C1	C6	H6	119.7	120.0
C6	C1	S1	121.9	119.9
C1	S1	N1	107.8	107.2
C1	S1	O1	109.9	106.4
C1	S1	O2	108.9	106.4
O1	S1	N1	109.4	106.4
O2	S1	N1	109.9	106.4
S1	N1	HN11	109.5	120.0
S1	N1	HN12	109.5	120.0
O1	S1	O2	110.8	123.1
HN11	N1	HN12	109.5	120.0

Torsion Angles for OSP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O4	S2	O3	C7	242.3	227.7
C7	S2	O3	N2	234.9	249.8
O3	S2	C7	C8	174.4	62.7
O3	S2	C7	H71	294.4	182.5
O3	S2	C7	H72	55.0	303.0
O4	S2	O3	N2	117.2	117.5
O3	S2	N2	C10	209.9	292.8
O3	S2	N2	C4	33.8	112.8
O3	S2	C7	O4	244.0	222.5
O3	S2	C7	N2	126.6	111.2
O4	S2	C7	N2	242.7	248.7
C7	S2	N2	C10	336.5	48.6
C7	S2	N2	C4	160.3	228.6
C8	C7	S2	H71	240.0	240.2
C8	C7	S2	H72	119.4	119.7
S2	C7	C8	C9	345.1	61.8
S2	C7	C8	H81	105.1	181.9
S2	C7	C8	H82	226.9	301.7
H71	C7	S2	H72	239.3	239.5
O3	S2	O4	C7	120.6	132.3
O3	S2	O4	N2	239.4	242.5
C7	S2	O4	N2	118.8	110.2
O4	S2	C7	C8	290.4	200.1
O4	S2	C7	H71	50.4	319.9
O4	S2	C7	H72	171.0	80.5
O4	S2	N2	C10	94.1	164.3
O4	S2	N2	C4	277.9	344.4
O3	S2	N2	C7	233.4	244.2
O3	S2	N2	O4	115.8	128.4
O4	S2	N2	C7	117.6	115.8
N2	S2	C7	C8	47.7	311.4
N2	S2	C7	H71	167.7	71.2
N2	S2	C7	H72	288.4	191.8
C9	C10	N2	S2	328.6	302.5
S2	N2	C10	H101	208.6	182.5
S2	N2	C10	H102	89.9	62.6
C10	N2	S2	C4	176.2	179.9
S2	N2	C4	C3	87.1	155.0
S2	N2	C4	C5	267.4	334.7
C8	C7	S2	N2	47.7	311.4
S2	C7	C8	H71	120.0	119.8
S2	C7	C8	H72	240.7	240.3
H71	C7	C8	H72	120.6	120.6
C9	C8	C7	H81	240.0	240.0
C9	C8	C7	H82	118.2	120.2
C7	C8	C9	C10	316.2	289.7
C7	C8	C9	H91	76.2	50.0
C7	C8	C9	H92	197.6	169.4
H81	C8	C7	H82	238.2	240.2
H71	C7	S2	N2	167.7	71.2
S2	C7	H71	C8	238.7	241.0
S2	C7	H71	H72	119.4	120.5
C8	C7	H71	H72	240.6	239.5
H71	C7	C8	C9	225.1	302.0
H71	C7	C8	H81	345.1	62.1
H71	C7	C8	H82	106.9	181.9
H72	C7	S2	N2	288.4	191.8
S2	C7	H72	C8	120.8	118.9
S2	C7	H72	H71	240.4	239.5
C8	C7	H72	H71	119.6	120.6
H72	C7	C8	C9	104.4	181.5
H72	C7	C8	H81	224.4	301.5
H72	C7	C8	H82	346.3	61.3
C9	C8	C7	H71	225.1	302.0
C9	C8	C7	H72	104.4	181.5
C7	C8	C9	H81	120.0	120.1
C7	C8	C9	H82	241.8	239.8
H81	C8	C9	H82	121.8	119.7
C10	C9	C8	H91	240.0	239.7
C10	C9	C8	H92	118.6	120.3
C8	C9	C10	N2	68.9	64.3
C8	C9	C10	H101	188.9	184.3
C8	C9	C10	H102	307.7	304.2
H91	C9	C8	H92	238.6	240.6
H81	C8	C7	H71	345.1	62.1
H81	C8	C7	H72	224.4	301.5
C7	C8	H81	C9	236.6	239.7
C7	C8	H81	H82	118.3	119.9
C9	C8	H81	H82	241.7	240.2
H81	C8	C9	C10	196.2	169.6
H81	C8	C9	H91	316.2	289.9
H81	C8	C9	H92	77.6	49.3
H82	C8	C7	H71	106.9	181.9
H82	C8	C7	H72	346.3	61.3
C7	C8	H82	C9	122.3	120.4
C7	C8	H82	H81	241.2	240.1
C9	C8	H82	H81	118.8	119.8
H82	C8	C9	C10	74.3	49.9
H82	C8	C9	H91	194.4	170.2
H82	C8	C9	H92	315.8	289.6
S2	N2	C10	C9	328.6	302.5
C10	C9	C8	H81	196.2	169.6
C10	C9	C8	H82	74.3	49.9
C8	C9	C10	H91	120.0	120.3
C8	C9	C10	H92	241.4	239.7
H91	C9	C10	H92	121.4	119.4
N2	C10	C9	H101	240.0	240.0
N2	C10	C9	H102	121.3	120.0
C9	C10	N2	C4	144.9	122.5
H101	C10	C9	H102	241.3	240.1
H91	C9	C8	H81	316.2	289.9
H91	C9	C8	H82	194.4	170.2
C8	C9	H91	C10	237.3	238.9
C8	C9	H91	H92	118.6	119.5
C10	C9	H91	H92	241.4	240.6
H91	C9	C10	N2	308.9	304.0
H91	C9	C10	H101	68.9	64.1
H91	C9	C10	H102	187.6	184.0
H92	C9	C8	H81	77.6	49.3
H92	C9	C8	H82	315.8	289.6
C8	C9	H92	C10	121.8	121.2
C8	C9	H92	H91	240.9	240.6
C10	C9	H92	H91	119.1	119.4
H92	C9	C10	N2	187.5	184.6
H92	C9	C10	H101	307.5	304.6
H92	C9	C10	H102	66.2	64.6
S2	N2	C10	C4	183.7	180.1
N2	C10	C9	H91	308.9	304.0
N2	C10	C9	H92	187.5	184.6
C9	C10	N2	H101	120.0	120.1
C9	C10	N2	H102	238.7	240.0
H101	C10	N2	H102	118.7	119.9
C10	N2	C4	C3	270.8	335.1
C10	N2	C4	C5	91.2	154.8
H101	C10	C9	H91	68.9	64.1
H101	C10	C9	H92	307.5	304.6
C9	C10	H101	N2	242.8	239.9
C9	C10	H101	H102	121.4	120.0
N2	C10	H101	H102	238.6	240.1
H101	C10	N2	C4	24.9	2.4
H102	C10	C9	H91	187.6	184.0
H102	C10	C9	H92	66.2	64.6
C9	C10	H102	N2	118.1	120.1
C9	C10	H102	H101	239.1	240.0
N2	C10	H102	H101	120.9	119.9
H102	C10	N2	C4	266.2	242.5
S2	N2	C4	C10	176.3	179.9
C4	N2	C10	H101	24.9	2.4
C4	N2	C10	H102	266.2	242.5
C3	C4	N2	C5	179.6	180.3
N2	C4	C3	C2	179.3	180.0
N2	C4	C3	H3	359.3	359.9
N2	C4	C5	C6	180.4	180.0
N2	C4	C5	H5	0.4	0.0
N2	C4	C3	C5	180.4	179.7
C3	C4	C5	C6	0.8	359.7
C3	C4	C5	H5	180.8	179.7
C2	C3	C4	H3	180.0	180.0
C4	C3	C2	C1	0.9	360.0
C4	C3	C2	H2	180.9	180.0
N2	C4	C5	C3	179.6	180.3
C5	C4	C3	C2	359.0	0.3
C5	C4	C3	H3	179.0	180.3
C6	C5	C4	H5	180.0	180.0
C4	C5	C6	C1	359.5	0.0
C4	C5	C6	H6	179.5	180.0
C2	C3	C4	C5	359.0	0.3
C4	C3	C2	H3	180.0	180.0
C1	C2	C3	H2	180.0	180.0
C3	C2	C1	C6	359.4	359.7
C3	C2	C1	S1	179.0	180.0
H3	C3	C4	C5	179.0	180.3
C4	C3	H3	C2	180.0	180.0
H3	C3	C2	C1	180.9	180.0
H3	C3	C2	H2	0.9	0.1
C1	C2	C3	H3	180.9	180.0
C3	C2	C1	H2	180.0	180.0
C5	C6	C1	C2	0.4	0.3
C2	C1	C6	H6	180.4	180.3
C6	C1	C2	S1	180.3	179.7
C2	C1	S1	N1	321.7	90.0
C2	C1	S1	O1	202.5	203.6
C2	C1	S1	O2	80.9	336.5
H2	C2	C3	H3	0.9	0.1
C3	C2	H2	C1	180.0	180.0
H2	C2	C1	C6	179.4	179.7
H2	C2	C1	S1	359.0	360.0
C4	C5	C6	H5	180.0	180.0
C2	C1	C6	C5	0.4	0.3
C1	C6	C5	H6	180.0	180.1
C5	C6	C1	S1	180.7	180.0
C4	C5	H5	C6	180.0	180.0
H5	C5	C6	C1	179.5	180.0
H5	C5	C6	H6	359.5	360.0
C6	C1	C2	H2	179.4	179.7
C2	C1	C6	S1	179.6	180.3
C1	C6	C5	H5	179.5	180.0
C5	C6	C1	H6	180.0	179.9
C6	C1	S1	N1	141.4	270.3
C6	C1	S1	O1	22.2	23.8
C6	C1	S1	O2	260.6	156.7
H6	C6	C5	H5	359.5	360.0
C5	C6	H6	C1	180.0	180.1
H6	C6	C1	S1	0.7	0.1
S1	C1	C2	H2	359.0	360.0
C2	C1	S1	C6	180.4	179.7
S1	C1	C6	H6	0.7	0.1
O1	S1	C1	N1	240.8	113.6
O2	S1	C1	N1	119.2	246.5
C1	S1	N1	HN11	332.1	0.1
C1	S1	N1	HN12	92.1	180.0
O1	S1	C1	O2	121.6	227.1
C1	S1	N1	O1	240.5	113.6
C1	S1	N1	O2	118.6	246.5
O1	S1	N1	O2	238.1	132.9
HN11	N1	S1	HN12	240.0	180.1
C1	S1	O1	N1	118.2	245.9
C1	S1	O1	O2	239.5	122.9
O2	S1	O1	N1	238.7	123.0
O1	S1	N1	HN11	91.6	246.5
O1	S1	N1	HN12	211.6	66.4
C1	S1	O2	N1	242.1	114.1
C1	S1	O2	O1	121.1	237.1
O1	S1	O2	N1	121.0	237.0
O2	S1	N1	HN11	213.5	113.6
O2	S1	N1	HN12	333.5	293.5
S1	N1	HN11	HN12	120.0	179.9
S1	N1	HN12	HN11	240.0	180.1