PDB Chemical Component OS1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OS1
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.417 |
|
C1 |
C6 |
1.392 |
|
C2 |
C3 |
1.418 |
|
C3 |
N5 |
1.341 |
|
C3 |
O4 |
1.247 |
|
N5 |
HN5 |
1.000 |
|
C6 |
N5 |
1.345 |
|
O7 |
C6 |
1.253 |
|
C8 |
C2 |
1.411 |
|
C8 |
C23 |
1.405 |
|
C9 |
C8 |
1.417 |
|
C10 |
C9 |
1.401 |
|
C10 |
C11 |
1.394 |
|
C11 |
C1 |
1.409 |
|
C12 |
C11 |
1.411 |
|
C12 |
C35 |
1.413 |
|
C13 |
C12 |
1.414 |
|
C13 |
N14 |
1.312 |
|
N14 |
C10 |
1.321 |
|
RU15 |
N14 |
2.037 |
|
RU15 |
N24 |
2.140 |
|
RU15 |
N19 |
2.085 |
|
CL16 |
RU15 |
2.389 |
|
C17 |
RU15 |
1.803 |
|
O18 |
C17 |
1.135 |
|
N19 |
C9 |
1.400 |
|
N19 |
C20 |
1.368 |
|
C20 |
C21 |
1.416 |
|
C20 |
H20 |
1.080 |
|
C21 |
N22 |
1.417 |
|
C21 |
C23 |
1.413 |
|
N22 |
HN22 |
1.000 |
|
N22 |
HN2A |
1.000 |
|
C23 |
H23 |
1.080 |
|
N24 |
HN24 |
1.000 |
|
C25 |
N24 |
1.469 |
|
C25 |
H25 |
1.100 |
|
C25 |
H25A |
1.100 |
|
C26 |
C25 |
1.497 |
|
N27 |
RU15 |
2.051 |
|
N27 |
C26 |
1.349 |
|
C28 |
N27 |
1.316 |
|
C28 |
H28 |
1.080 |
|
C29 |
C28 |
1.359 |
|
C29 |
C30 |
1.362 |
|
C29 |
H29 |
1.080 |
|
C30 |
C31 |
1.353 |
|
C30 |
H30 |
1.080 |
|
C31 |
C26 |
1.361 |
|
C31 |
H31 |
1.080 |
|
C32 |
C13 |
1.409 |
|
C32 |
C33 |
1.419 |
|
C32 |
H32 |
1.080 |
|
C33 |
C34 |
1.425 |
|
C33 |
H33 |
1.080 |
|
C34 |
C35 |
1.406 |
|
C34 |
H34 |
1.080 |
|
C35 |
H35 |
1.080 |
|
Bond Angles for OS1
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
107.2 |
|
C1 |
C2 |
C3 |
106.3 |
|
C1 |
C6 |
N5 |
107.5 |
|
C2 |
C3 |
N5 |
106.9 |
|
C2 |
C3 |
O4 |
137.7 |
|
O4 |
C3 |
N5 |
115.4 |
|
C3 |
N5 |
HN5 |
123.9 |
|
C6 |
N5 |
HN5 |
124.0 |
|
C9 |
C8 |
C23 |
117.0 |
|
C8 |
C23 |
C21 |
119.8 |
|
C8 |
C23 |
H23 |
120.1 |
|
C13 |
C12 |
C35 |
120.8 |
|
C12 |
C35 |
C34 |
119.2 |
|
C12 |
C35 |
H35 |
120.4 |
|
N19 |
RU15 |
N24 |
91.0 |
|
CL16 |
RU15 |
N24 |
87.2 |
|
C17 |
RU15 |
N24 |
177.0 |
|
RU15 |
N24 |
HN24 |
111.2 |
|
CL16 |
RU15 |
N19 |
90.1 |
|
C17 |
RU15 |
N19 |
89.9 |
|
RU15 |
N19 |
C20 |
133.4 |
|
N19 |
C20 |
C21 |
120.1 |
|
N19 |
C20 |
H20 |
119.9 |
|
C21 |
C20 |
H20 |
120.0 |
|
C20 |
C21 |
N22 |
124.0 |
|
C20 |
C21 |
C23 |
120.9 |
|
N22 |
C21 |
C23 |
115.0 |
|
C21 |
N22 |
HN22 |
109.5 |
|
C21 |
N22 |
HN2A |
109.4 |
|
C21 |
C23 |
H23 |
120.1 |
|
HN22 |
N22 |
HN2A |
109.4 |
|
C25 |
N24 |
HN24 |
111.1 |
|
H25 |
C25 |
H25A |
107.8 |
|
C26 |
C25 |
H25 |
111.1 |
|
C26 |
C25 |
H25A |
111.1 |
|
C29 |
C28 |
H28 |
117.3 |
|
C30 |
C29 |
H29 |
120.9 |
|
C29 |
C30 |
C31 |
117.8 |
|
C29 |
C30 |
H30 |
121.1 |
|
C31 |
C30 |
H30 |
121.1 |
|
C30 |
C31 |
H31 |
119.3 |
|
C33 |
C32 |
H32 |
121.2 |
|
C32 |
C33 |
C34 |
121.8 |
|
C32 |
C33 |
H33 |
119.1 |
|
C34 |
C33 |
H33 |
119.1 |
|
C33 |
C34 |
C35 |
119.5 |
|
C33 |
C34 |
H34 |
120.2 |
|
C35 |
C34 |
H34 |
120.3 |
|
C34 |
C35 |
H35 |
120.4 |
|
Torsion Angles for OS1
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
N5 |
0.3 |
|
C1 |
C2 |
C3 |
N5 |
0.4 |
|
C1 |
C2 |
C3 |
O4 |
179.0 |
|
C6 |
C1 |
C2 |
C3 |
359.6 |
|
C1 |
C6 |
N5 |
HN5 |
179.9 |
|
C3 |
C2 |
C1 |
C6 |
359.6 |
|
O4 |
C3 |
C2 |
N5 |
178.5 |
|
C2 |
C3 |
N5 |
HN5 |
179.8 |
|
C1 |
C6 |
N5 |
C3 |
360.0 |
|
C2 |
C3 |
N5 |
O4 |
178.9 |
|
C6 |
N5 |
C3 |
HN5 |
180.0 |
|
C2 |
C3 |
O4 |
N5 |
181.5 |
|
O4 |
C3 |
N5 |
HN5 |
0.9 |
|
C3 |
N5 |
C6 |
HN5 |
180.0 |
|
O7 |
C6 |
N5 |
HN5 |
359.8 |
|
C20 |
C21 |
C23 |
C8 |
359.9 |
|
N22 |
C21 |
C23 |
C8 |
179.3 |
|
C21 |
C23 |
C8 |
H23 |
180.0 |
|
C9 |
C8 |
C23 |
C21 |
0.5 |
|
C9 |
C8 |
C23 |
H23 |
180.5 |
|
C10 |
C9 |
C8 |
C23 |
180.4 |
|
C33 |
C34 |
C35 |
C12 |
1.0 |
|
C12 |
C35 |
C34 |
H34 |
181.1 |
|
C34 |
C35 |
C12 |
H35 |
180.0 |
|
C13 |
C12 |
C35 |
C34 |
359.8 |
|
C13 |
C12 |
C35 |
H35 |
179.9 |
|
N14 |
C13 |
C12 |
C35 |
178.6 |
|
CL16 |
RU15 |
N24 |
N19 |
90.0 |
|
C17 |
RU15 |
N24 |
N19 |
105.7 |
|
N24 |
RU15 |
N19 |
C20 |
94.5 |
|
C25 |
N24 |
RU15 |
HN24 |
240.0 |
|
CL16 |
RU15 |
N19 |
N24 |
272.8 |
|
C17 |
RU15 |
N19 |
N24 |
182.9 |
|
N19 |
RU15 |
N24 |
HN24 |
264.4 |
|
RU15 |
N19 |
C20 |
C21 |
183.8 |
|
RU15 |
N19 |
C20 |
H20 |
3.8 |
|
N19 |
RU15 |
CL16 |
N24 |
90.9 |
|
C17 |
RU15 |
CL16 |
N24 |
180.8 |
|
CL16 |
RU15 |
N24 |
HN24 |
354.4 |
|
C17 |
RU15 |
CL16 |
N19 |
89.9 |
|
CL16 |
RU15 |
N19 |
C20 |
7.3 |
|
N19 |
RU15 |
C17 |
N24 |
105.7 |
|
CL16 |
RU15 |
C17 |
N24 |
15.6 |
|
C17 |
RU15 |
N24 |
HN24 |
10.0 |
|
CL16 |
RU15 |
C17 |
N19 |
269.9 |
|
C17 |
RU15 |
N19 |
C20 |
277.4 |
|
O18 |
C17 |
RU15 |
N24 |
297.4 |
|
O18 |
C17 |
RU15 |
N19 |
43.1 |
|
N19 |
C9 |
C8 |
C23 |
357.9 |
|
C20 |
N19 |
RU15 |
N24 |
94.5 |
|
C21 |
C20 |
N19 |
H20 |
180.0 |
|
N19 |
C20 |
C21 |
N22 |
181.9 |
|
N19 |
C20 |
C21 |
C23 |
1.2 |
|
C8 |
C23 |
C21 |
C20 |
359.9 |
|
N19 |
C20 |
C21 |
H20 |
180.0 |
|
N22 |
C21 |
C20 |
C23 |
180.7 |
|
C20 |
C21 |
N22 |
HN22 |
180.0 |
|
C20 |
C21 |
N22 |
HN2A |
300.0 |
|
C20 |
C21 |
C23 |
H23 |
179.9 |
|
N19 |
C20 |
H20 |
C21 |
180.0 |
|
H20 |
C20 |
C21 |
N22 |
2.0 |
|
H20 |
C20 |
C21 |
C23 |
181.2 |
|
C8 |
C23 |
C21 |
N22 |
179.3 |
|
N22 |
C21 |
C20 |
H20 |
2.0 |
|
C20 |
C21 |
N22 |
C23 |
179.3 |
|
N22 |
C21 |
C23 |
H23 |
359.3 |
|
HN22 |
N22 |
C21 |
HN2A |
240.0 |
|
C8 |
C23 |
C21 |
H23 |
180.0 |
|
C23 |
C21 |
C20 |
H20 |
181.2 |
|
C20 |
C21 |
C23 |
N22 |
180.6 |
|
C23 |
C21 |
N22 |
HN22 |
0.7 |
|
C23 |
C21 |
N22 |
HN2A |
120.7 |
|
HN22 |
N22 |
C21 |
C23 |
0.7 |
|
C21 |
N22 |
HN22 |
HN2A |
120.0 |
|
HN2A |
N22 |
C21 |
C23 |
120.7 |
|
C21 |
N22 |
HN2A |
HN22 |
240.0 |
|
C8 |
C23 |
H23 |
C21 |
180.0 |
|
RU15 |
N24 |
C25 |
HN24 |
120.0 |
|
H25 |
C25 |
N24 |
HN24 |
46.1 |
|
C26 |
C25 |
H25 |
H25A |
238.0 |
|
H25A |
C25 |
N24 |
HN24 |
166.1 |
|
C26 |
C25 |
H25A |
H25 |
122.0 |
|
C26 |
C25 |
N24 |
HN24 |
286.1 |
|
H25 |
C25 |
C26 |
H25A |
120.0 |
|
N27 |
RU15 |
N24 |
HN24 |
83.0 |
|
N27 |
C26 |
C25 |
H25 |
203.5 |
|
N27 |
C26 |
C25 |
H25A |
83.5 |
|
C30 |
C29 |
C28 |
H28 |
178.7 |
|
C31 |
C30 |
C29 |
H30 |
180.0 |
|
C29 |
C30 |
C31 |
H31 |
179.3 |
|
H29 |
C29 |
C28 |
H28 |
358.7 |
|
H29 |
C29 |
C30 |
C31 |
180.8 |
|
H29 |
C29 |
C30 |
H30 |
0.8 |
|
C31 |
C30 |
C29 |
H29 |
180.8 |
|
C29 |
C30 |
C31 |
H30 |
180.0 |
|
H30 |
C30 |
C29 |
H29 |
0.8 |
|
C29 |
C30 |
H30 |
C31 |
180.0 |
|
H30 |
C30 |
C31 |
H31 |
359.3 |
|
C31 |
C26 |
C25 |
H25 |
22.8 |
|
C31 |
C26 |
C25 |
H25A |
262.8 |
|
H31 |
C31 |
C30 |
H30 |
359.3 |
|
C32 |
C13 |
C12 |
C35 |
359.6 |
|
C34 |
C33 |
C32 |
H33 |
180.0 |
|
C32 |
C33 |
C34 |
C35 |
358.6 |
|
C32 |
C33 |
C34 |
H34 |
178.6 |
|
H32 |
C32 |
C33 |
C34 |
180.8 |
|
H32 |
C32 |
C33 |
H33 |
0.8 |
|
C12 |
C35 |
C34 |
C33 |
1.0 |
|
C34 |
C33 |
C32 |
H32 |
180.8 |
|
C32 |
C33 |
C34 |
H33 |
180.0 |
|
C35 |
C34 |
C33 |
H34 |
180.0 |
|
C33 |
C34 |
C35 |
H35 |
181.0 |
|
H33 |
C33 |
C32 |
H32 |
0.8 |
|
C32 |
C33 |
H33 |
C34 |
180.0 |
|
H33 |
C33 |
C34 |
C35 |
178.6 |
|
H33 |
C33 |
C34 |
H34 |
358.6 |
|
C12 |
C35 |
C34 |
H35 |
180.0 |
|
C35 |
C34 |
C33 |
H33 |
178.6 |
|
C33 |
C34 |
C35 |
H34 |
180.0 |
|
H34 |
C34 |
C33 |
H33 |
358.6 |
|
C33 |
C34 |
H34 |
C35 |
180.0 |
|
H34 |
C34 |
C35 |
H35 |
1.0 |
|
C12 |
C35 |
H35 |
C34 |
180.0 |
|
H35 |
C35 |
C34 |
H34 |
1.0 |
|