PDB Chemical Component OQR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OQR
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O2 |
N2 |
1.528 |
1.218 |
| O1 |
N2 |
1.422 |
1.218 |
| N2 |
C3 |
1.337 |
1.480 |
| C10 |
C2 |
1.411 |
1.508 |
| C10 |
O3 |
1.439 |
1.428 |
| C3 |
C2 |
1.408 |
1.382 |
| C3 |
C4 |
1.387 |
1.381 |
| C2 |
C1 |
1.399 |
1.381 |
| C4 |
C5 |
1.382 |
1.390 |
| C1 |
C6 |
1.406 |
1.384 |
| C5 |
C6 |
1.390 |
1.386 |
| C5 |
N1 |
1.408 |
1.400 |
| C6 |
C9 |
1.402 |
1.506 |
| N1 |
C7 |
1.479 |
1.472 |
| C9 |
C8 |
1.531 |
1.529 |
| C7 |
C11 |
1.510 |
1.530 |
| C7 |
C8 |
1.506 |
1.535 |
| N3 |
C11 |
1.462 |
1.469 |
| N3 |
C14 |
1.470 |
1.469 |
| C13 |
C14 |
1.536 |
1.530 |
| C14 |
C12 |
1.531 |
1.530 |
| C8 |
H1 |
1.100 |
1.090 |
| C8 |
H2 |
1.101 |
1.090 |
| C9 |
H3 |
1.100 |
1.090 |
| C9 |
H4 |
1.100 |
1.090 |
| C1 |
H5 |
1.080 |
1.080 |
| C10 |
H6 |
1.100 |
1.090 |
| C10 |
H7 |
1.100 |
1.091 |
| O3 |
H8 |
0.950 |
0.967 |
| C4 |
H9 |
1.080 |
1.080 |
| N1 |
H10 |
1.000 |
0.970 |
| C7 |
H11 |
1.100 |
1.090 |
| C11 |
H12 |
1.100 |
1.090 |
| C11 |
H13 |
1.100 |
1.091 |
| N3 |
H14 |
1.000 |
1.009 |
| C14 |
H16 |
1.100 |
1.090 |
| C12 |
H17 |
1.100 |
1.090 |
| C12 |
H18 |
1.100 |
1.089 |
| C12 |
H19 |
1.100 |
1.090 |
| C13 |
H20 |
1.101 |
1.090 |
| C13 |
H21 |
1.100 |
1.091 |
| C13 |
H22 |
1.100 |
1.089 |
Bond Angles for OQR
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N2 |
C3 |
C4 |
115.4 |
120.0 |
| O3 |
C10 |
H6 |
108.7 |
109.5 |
| O3 |
C10 |
H7 |
108.7 |
109.5 |
| C10 |
O3 |
H8 |
109.5 |
114.0 |
| C3 |
C4 |
C5 |
121.0 |
120.0 |
| C3 |
C4 |
H9 |
119.5 |
120.0 |
| C2 |
C1 |
H5 |
119.2 |
119.8 |
| C4 |
C5 |
N1 |
119.2 |
119.1 |
| C5 |
C4 |
H9 |
119.5 |
120.0 |
| C5 |
N1 |
C7 |
120.1 |
119.0 |
| C5 |
N1 |
H10 |
106.7 |
120.5 |
| C6 |
C9 |
H3 |
109.0 |
109.3 |
| C6 |
C9 |
H4 |
109.1 |
109.1 |
| N1 |
C7 |
C11 |
110.7 |
109.8 |
| C7 |
N1 |
H10 |
106.7 |
120.5 |
| N1 |
C7 |
H11 |
109.7 |
109.8 |
| C9 |
C8 |
H1 |
109.4 |
109.5 |
| C9 |
C8 |
H2 |
109.4 |
109.6 |
| C11 |
C7 |
H11 |
109.3 |
109.8 |
| C7 |
C11 |
H12 |
108.9 |
109.5 |
| C7 |
C11 |
H13 |
108.9 |
109.4 |
| C7 |
C8 |
H1 |
109.4 |
109.5 |
| C7 |
C8 |
H2 |
109.4 |
109.6 |
| N3 |
C11 |
H12 |
108.9 |
109.5 |
| N3 |
C11 |
H13 |
108.9 |
109.5 |
| N3 |
C14 |
C12 |
111.0 |
109.5 |
| C14 |
N3 |
H14 |
110.3 |
111.0 |
| N3 |
C14 |
H16 |
108.5 |
109.5 |
| C13 |
C14 |
H16 |
107.7 |
109.5 |
| C12 |
C14 |
H16 |
107.7 |
109.5 |
| C14 |
C12 |
H17 |
109.5 |
109.5 |
| C14 |
C12 |
H18 |
109.5 |
109.5 |
| C14 |
C12 |
H19 |
109.5 |
109.5 |
| H1 |
C8 |
H2 |
109.5 |
109.6 |
| H3 |
C9 |
H4 |
109.5 |
109.3 |
| H6 |
C10 |
H7 |
109.5 |
109.5 |
| H12 |
C11 |
H13 |
109.4 |
109.5 |
| H17 |
C12 |
H18 |
109.4 |
109.5 |
| H17 |
C12 |
H19 |
109.4 |
109.4 |
| H18 |
C12 |
H19 |
109.5 |
109.5 |
| H20 |
C13 |
H21 |
109.4 |
109.4 |
| H20 |
C13 |
H22 |
109.5 |
109.5 |
| H21 |
C13 |
H22 |
109.5 |
109.5 |
Torsion Angles for OQR
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2 |
N2 |
C3 |
C4 |
148.9 |
180.0 |
| O1 |
N2 |
C3 |
C4 |
335.6 |
0.0 |
| N2 |
C3 |
C4 |
C5 |
179.9 |
180.0 |
| N2 |
C3 |
C4 |
H9 |
359.9 |
359.9 |
| C10 |
C2 |
C1 |
H5 |
0.3 |
0.0 |
| H6 |
C10 |
O3 |
H7 |
119.1 |
120.0 |
| C3 |
C2 |
C1 |
H5 |
179.8 |
180.0 |
| C3 |
C4 |
C5 |
N1 |
178.7 |
180.4 |
| C5 |
C4 |
C3 |
H9 |
180.0 |
180.1 |
| C3 |
C4 |
C5 |
H9 |
180.0 |
179.9 |
| C4 |
C5 |
N1 |
C7 |
187.1 |
193.2 |
| C4 |
C5 |
N1 |
H10 |
308.6 |
13.3 |
| C1 |
C6 |
C9 |
H3 |
267.0 |
80.3 |
| C1 |
C6 |
C9 |
H4 |
26.5 |
320.8 |
| C5 |
C6 |
C9 |
H3 |
86.3 |
260.4 |
| C5 |
C6 |
C9 |
H4 |
205.8 |
140.8 |
| N1 |
C5 |
C4 |
H9 |
358.7 |
0.4 |
| C5 |
N1 |
C7 |
C11 |
261.9 |
195.8 |
| C7 |
N1 |
C5 |
H10 |
238.5 |
179.9 |
| C5 |
N1 |
C7 |
H11 |
141.2 |
75.0 |
| C6 |
C9 |
C8 |
H1 |
180.1 |
68.4 |
| C6 |
C9 |
C8 |
H2 |
300.0 |
188.7 |
| H3 |
C9 |
C6 |
H4 |
240.5 |
119.5 |
| C5 |
N1 |
C7 |
H10 |
121.5 |
180.1 |
| C11 |
C7 |
N1 |
H11 |
120.7 |
120.8 |
| N1 |
C7 |
C11 |
H12 |
46.4 |
65.0 |
| N1 |
C7 |
C11 |
H13 |
165.7 |
185.0 |
| N1 |
C7 |
C8 |
H1 |
188.0 |
303.3 |
| N1 |
C7 |
C8 |
H2 |
68.1 |
183.1 |
| C7 |
C8 |
C9 |
H1 |
239.9 |
240.2 |
| C7 |
C8 |
C9 |
H2 |
120.0 |
119.9 |
| H1 |
C8 |
C9 |
H2 |
240.1 |
239.7 |
| C11 |
C7 |
N1 |
H10 |
140.4 |
15.7 |
| N1 |
C7 |
C11 |
H11 |
239.1 |
239.1 |
| C11 |
C7 |
C8 |
H1 |
308.8 |
62.9 |
| C11 |
C7 |
C8 |
H2 |
188.9 |
302.6 |
| N3 |
C11 |
C7 |
H12 |
239.6 |
240.0 |
| N3 |
C11 |
C7 |
H13 |
120.4 |
120.0 |
| H12 |
C11 |
C7 |
H13 |
240.7 |
240.0 |
| C9 |
C8 |
C7 |
H1 |
120.1 |
119.8 |
| C9 |
C8 |
C7 |
H2 |
240.0 |
240.1 |
| H1 |
C8 |
C7 |
H2 |
119.9 |
120.3 |
| N3 |
C11 |
C7 |
H11 |
47.0 |
65.8 |
| C7 |
C11 |
N3 |
H12 |
120.4 |
120.0 |
| C7 |
C11 |
N3 |
H13 |
239.6 |
240.1 |
| H12 |
C11 |
N3 |
H13 |
119.3 |
120.0 |
| C14 |
N3 |
C11 |
H12 |
120.0 |
60.0 |
| C14 |
N3 |
C11 |
H13 |
0.7 |
300.0 |
| C13 |
C14 |
N3 |
H16 |
118.1 |
240.0 |
| C12 |
C14 |
N3 |
H16 |
241.9 |
120.0 |
| N3 |
C14 |
C12 |
H17 |
180.0 |
180.0 |
| N3 |
C14 |
C12 |
H18 |
300.0 |
300.0 |
| N3 |
C14 |
C12 |
H19 |
60.0 |
60.0 |
| C13 |
C14 |
N3 |
H14 |
69.0 |
81.0 |
| N3 |
C14 |
C13 |
H16 |
241.4 |
120.0 |
| C12 |
C14 |
C13 |
H16 |
117.6 |
240.0 |
| C13 |
C14 |
C12 |
H17 |
303.9 |
60.0 |
| C13 |
C14 |
C12 |
H18 |
63.8 |
180.0 |
| C13 |
C14 |
C12 |
H19 |
183.9 |
300.0 |
| C12 |
C14 |
N3 |
H14 |
192.8 |
321.0 |
| N3 |
C14 |
C12 |
H16 |
118.6 |
240.0 |
| C13 |
C14 |
C12 |
H16 |
242.4 |
120.0 |
| H17 |
C12 |
C14 |
H18 |
240.0 |
240.0 |
| H17 |
C12 |
C14 |
H19 |
120.0 |
120.0 |
| H18 |
C12 |
C14 |
H19 |
240.0 |
240.0 |
| C9 |
C8 |
H1 |
H2 |
119.8 |
120.3 |
| C7 |
C8 |
H1 |
H2 |
240.1 |
239.7 |
| C9 |
C8 |
H2 |
H1 |
240.2 |
239.7 |
| C7 |
C8 |
H2 |
H1 |
119.9 |
120.2 |
| C6 |
C9 |
H3 |
H4 |
119.2 |
240.6 |
| H3 |
C9 |
C8 |
H1 |
59.9 |
188.8 |
| H3 |
C9 |
C8 |
H2 |
179.7 |
309.0 |
| C6 |
C9 |
H4 |
H3 |
240.8 |
119.5 |
| H4 |
C9 |
C8 |
H1 |
300.3 |
308.3 |
| H4 |
C9 |
C8 |
H2 |
60.2 |
68.6 |
| O3 |
C10 |
H6 |
H7 |
241.4 |
240.0 |
| H6 |
C10 |
O3 |
H8 |
59.5 |
60.0 |
| O3 |
C10 |
H7 |
H6 |
118.6 |
120.0 |
| H7 |
C10 |
O3 |
H8 |
300.5 |
300.0 |
| H8 |
O3 |
C10 |
H6 |
59.5 |
60.0 |
| H8 |
O3 |
C10 |
H7 |
300.5 |
300.0 |
| C3 |
C4 |
H9 |
C5 |
180.0 |
180.1 |
| H9 |
C4 |
C5 |
N1 |
358.7 |
0.4 |
| C5 |
N1 |
H10 |
C7 |
230.4 |
179.9 |
| H10 |
N1 |
C7 |
C11 |
140.4 |
15.7 |
| H10 |
N1 |
C7 |
H11 |
19.7 |
254.9 |
| N1 |
C7 |
H11 |
C11 |
121.6 |
120.8 |
| H11 |
C7 |
N1 |
H10 |
19.7 |
254.9 |
| H11 |
C7 |
C11 |
H12 |
167.3 |
185.9 |
| H11 |
C7 |
C11 |
H13 |
286.6 |
305.9 |
| H11 |
C7 |
C8 |
H1 |
67.5 |
183.8 |
| H11 |
C7 |
C8 |
H2 |
307.6 |
63.5 |
| H12 |
C11 |
C7 |
H11 |
167.3 |
185.9 |
| C7 |
C11 |
H12 |
H13 |
119.0 |
120.0 |
| N3 |
C11 |
H12 |
H13 |
241.1 |
240.0 |
| H13 |
C11 |
C7 |
H11 |
286.6 |
305.9 |
| C7 |
C11 |
H13 |
H12 |
241.0 |
240.0 |
| N3 |
C11 |
H13 |
H12 |
118.9 |
120.0 |
| H14 |
N3 |
C11 |
H12 |
239.5 |
183.9 |
| H14 |
N3 |
C11 |
H13 |
120.2 |
63.9 |
| H14 |
N3 |
C14 |
C12 |
192.8 |
321.0 |
| H14 |
N3 |
C14 |
H16 |
310.9 |
201.0 |
| N3 |
C14 |
H16 |
C12 |
239.8 |
120.0 |
| H16 |
C14 |
N3 |
H14 |
310.9 |
201.0 |
| H16 |
C14 |
C12 |
H17 |
61.4 |
300.0 |
| H16 |
C14 |
C12 |
H18 |
181.4 |
60.0 |
| H16 |
C14 |
C12 |
H19 |
301.4 |
180.0 |
| H17 |
C12 |
C14 |
H16 |
61.4 |
300.0 |
| C14 |
C12 |
H17 |
H18 |
120.0 |
120.0 |
| C14 |
C12 |
H17 |
H19 |
240.0 |
240.0 |
| H18 |
C12 |
H17 |
H19 |
120.0 |
120.0 |
| H18 |
C12 |
C14 |
H16 |
181.4 |
60.0 |
| C14 |
C12 |
H18 |
H17 |
240.0 |
240.0 |
| C14 |
C12 |
H18 |
H19 |
120.0 |
120.0 |
| H17 |
C12 |
H18 |
H19 |
240.0 |
240.0 |
| H19 |
C12 |
C14 |
H16 |
301.4 |
180.0 |
| C14 |
C12 |
H19 |
H17 |
120.0 |
120.0 |
| C14 |
C12 |
H19 |
H18 |
240.0 |
240.0 |
| H17 |
C12 |
H19 |
H18 |
119.9 |
120.0 |
| H20 |
C13 |
C14 |
H16 |
298.6 |
300.1 |
| H21 |
C13 |
H20 |
H22 |
120.0 |
120.0 |
| H21 |
C13 |
C14 |
H16 |
58.6 |
60.0 |
| H20 |
C13 |
H21 |
H22 |
240.0 |
240.0 |
| H22 |
C13 |
C14 |
H16 |
178.6 |
180.0 |
| H20 |
C13 |
H22 |
H21 |
120.0 |
119.9 |