PDB Chemical Component OPA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for OPA

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	C2	1.422	1.432
O1	C6	1.443	1.427
C2	C3	1.500	1.496
C2	H21	1.114	1.090
C2	H22A	1.114	1.090
C3	C4	1.352	1.354
C3	S13	1.742	1.766
C4	C5	1.497	1.525
C4	C15	1.472	1.447
C5	C6	1.554	1.533
C5	H51	1.115	1.090
C5	H52	1.115	1.090
C6	H61	1.116	1.089
C6	H62	1.115	1.089
S13	C14	1.695	1.732
C14	C15	1.343	1.391
C14	N19	1.421	1.383
C15	C16	1.512	1.464
C16	O17	1.320	1.349
C16	O18	1.203	1.217
O17	H17	0.951	0.967
N19	C20	1.348	1.347
N19	H19	1.021	0.970
C20	C21	1.575	1.493
C20	O24	1.215	1.214
C21	O22	1.195	1.345
C21	O23	1.364	1.212
O22	H22	0.950	0.968

Bond Angles for OPA

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	O1	C6	116.2	107.9
O1	C2	C3	105.7	108.6
O1	C2	H21	113.6	109.7
O1	C2	H22A	113.6	109.7
O1	C6	C5	113.7	110.4
O1	C6	H61	110.7	109.3
O1	C6	H62	110.7	109.3
C3	C2	H21	113.6	109.6
C3	C2	H22A	113.6	109.6
C2	C3	C4	126.2	125.6
C2	C3	S13	121.0	129.7
H21	C2	H22A	96.9	109.7
C4	C3	S13	112.6	104.7
C3	C4	C5	124.6	118.7
C3	C4	C15	112.9	115.5
C3	S13	C14	89.0	99.3
C5	C4	C15	122.0	125.8
C4	C5	C6	103.0	107.1
C4	C5	H51	114.7	109.9
C4	C5	H52	114.7	109.9
C4	C15	C14	107.7	117.2
C4	C15	C16	128.9	121.4
C6	C5	H51	114.7	109.9
C6	C5	H52	114.7	109.9
C5	C6	H61	110.6	109.3
C5	C6	H62	110.7	109.4
H51	C5	H52	95.7	110.0
H61	C6	H62	99.6	109.2
S13	C14	C15	117.6	103.3
S13	C14	N19	123.1	128.4
C15	C14	N19	119.2	128.4
C14	C15	C16	123.4	121.4
C14	N19	C20	128.3	120.0
C14	N19	H19	119.0	120.0
C15	C16	O17	122.9	120.0
C15	C16	O18	119.1	120.0
O17	C16	O18	117.7	120.0
C16	O17	H17	122.9	120.0
C20	N19	H19	112.7	119.9
N19	C20	C21	112.9	120.0
N19	C20	O24	126.7	120.0
C21	C20	O24	120.4	120.0
C20	C21	O22	123.6	120.0
C20	C21	O23	116.1	120.0
O22	C21	O23	120.2	120.0
C21	O22	H22	123.7	120.0

Torsion Angles for OPA

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	O1	C6	C5	69.3	283.8
C2	O1	C6	H61	194.5	44.0
C2	O1	C6	H62	304.0	163.4
C3	C2	O1	H21	234.8	119.7
C3	C2	O1	H22A	125.2	240.2
O1	C2	C3	C4	1.0	341.8
O1	C2	C3	S13	187.7	161.6
H21	C2	O1	H22A	250.5	120.5
C6	O1	C2	C3	319.0	54.1
C6	O1	C2	H21	84.2	294.4
C6	O1	C2	H22A	193.7	173.9
C4	C5	C6	O1	314.3	53.1
O1	C6	C5	H51	189.0	172.5
O1	C6	C5	H52	79.6	293.7
C5	C6	O1	H61	234.7	239.8
C5	C6	O1	H62	125.3	120.4
H61	C6	O1	H62	250.5	240.6
C3	C2	O1	C6	319.0	54.1
O1	C2	C3	H21	125.2	240.3
O1	C2	C3	H22A	234.8	119.8
H21	C2	C3	H22A	109.6	239.5
C4	C3	C2	S13	173.4	180.2
C2	C3	C4	C5	14.8	359.7
C2	C3	C4	C15	186.9	179.4
C2	C3	S13	C14	175.9	180.3
H21	C2	O1	C6	84.2	294.4
O1	C2	H21	C3	239.1	119.1
O1	C2	H21	H22A	119.5	239.5
C3	C2	H21	H22A	240.4	120.4
H21	C2	C3	C4	235.8	101.6
H21	C2	C3	S13	62.5	281.4
H22A	C2	O1	C6	193.7	173.9
O1	C2	H22A	C3	120.9	240.9
O1	C2	H22A	H21	240.5	120.5
C3	C2	H22A	H21	119.6	239.6
H22A	C2	C3	C4	126.3	222.0
H22A	C2	C3	S13	312.9	41.8
C4	C3	C2	H21	235.8	101.6
C4	C3	C2	H22A	126.3	222.0
C2	C3	C4	S13	186.2	179.8
C4	C3	S13	C14	1.7	0.1
C5	C4	C3	C15	187.9	180.2
C3	C4	C5	C6	8.1	344.2
C3	C4	C5	H51	133.3	224.8
C3	C4	C5	H52	242.8	103.6
C3	C4	C15	C14	356.5	0.6
C3	C4	C15	C16	177.0	180.4
S13	C3	C2	H21	62.5	281.4
S13	C3	C2	H22A	312.9	41.8
C2	C3	S13	C4	174.2	180.2
S13	C3	C4	C5	188.6	179.8
S13	C3	C4	C15	0.7	359.6
C3	S13	C14	C15	356.0	0.2
C3	S13	C14	N19	177.5	180.0
O1	C6	C5	C4	314.3	53.1
C5	C4	C3	S13	188.6	179.8
C3	C4	C5	C15	171.4	179.8
C5	C4	C15	C14	168.9	180.4
C5	C4	C15	C16	349.4	0.2
C6	C5	C4	H51	234.7	119.4
C6	C5	C4	H52	125.3	240.6
C4	C5	C6	H61	188.9	292.9
C4	C5	C6	H62	79.5	173.4
H51	C5	C4	H52	250.6	121.2
C15	C4	C3	S13	0.7	359.6
C3	C4	C15	C5	187.6	180.2
C15	C4	C5	C6	196.6	164.5
C15	C4	C5	H51	321.9	45.1
C15	C4	C5	H52	71.3	283.9
S13	C14	C15	C4	5.0	359.6
C4	C15	C14	N19	183.5	179.8
C14	C15	C4	C16	179.5	180.2
C4	C15	C16	O17	168.8	270.0
C4	C15	C16	O18	355.7	90.0
O1	C6	C5	H61	125.3	120.2
O1	C6	C5	H62	234.7	239.7
C6	C5	C4	C15	196.6	164.5
C4	C5	C6	H51	125.3	240.6
C4	C5	C6	H52	234.7	119.4
H51	C5	C6	H52	109.4	238.8
H61	C6	C5	H62	109.4	119.5
H51	C5	C4	C15	321.9	45.1
C4	C5	H51	C6	241.1	117.7
C4	C5	H51	H52	120.6	238.8
C6	C5	H51	H52	239.5	121.2
H51	C5	C6	H61	63.7	52.3
H51	C5	C6	H62	314.2	292.8
H52	C5	C4	C15	71.3	283.9
C4	C5	H52	C6	118.9	242.3
C4	C5	H52	H51	239.4	121.1
C6	C5	H52	H51	120.5	238.8
H52	C5	C6	H61	314.3	173.5
H52	C5	C6	H62	204.9	54.0
O1	C6	H61	C5	233.1	239.1
O1	C6	H61	H62	116.6	119.5
H61	C6	C5	H51	63.7	52.3
H61	C6	C5	H52	314.3	173.5
C5	C6	H61	H62	243.5	240.4
O1	C6	H62	C5	126.9	121.0
O1	C6	H62	H61	243.4	240.5
H62	C6	C5	H51	314.2	292.8
H62	C6	C5	H52	204.9	54.0
C5	C6	H62	H61	116.5	119.6
C4	C15	C14	S13	5.0	359.6
C15	C14	S13	N19	178.5	180.2
S13	C14	C15	C16	184.5	179.7
S13	C14	N19	C20	5.9	360.0
S13	C14	N19	H19	185.9	180.0
C4	C15	C14	C16	180.4	179.8
S13	C14	C15	N19	181.5	179.8
C15	C14	N19	C20	187.4	179.7
C15	C14	N19	H19	7.4	359.7
C14	C15	C16	O17	349.3	89.8
C14	C15	C16	O18	176.2	269.8
S13	C14	N19	C15	178.5	180.3
N19	C14	C15	C16	3.0	359.9
C20	N19	C14	H19	180.0	180.0
C14	N19	C20	C21	173.4	180.0
C14	N19	C20	O24	349.8	360.0
C4	C15	C16	C14	179.5	180.2
C16	C15	C14	N19	3.0	359.9
O17	C16	C15	O18	173.1	180.0
C15	C16	O17	H17	180.0	180.0
C15	C16	O17	O18	186.8	180.0
C15	C16	O18	O17	173.5	180.0
O18	C16	O17	H17	353.2	0.1
H17	O17	C16	O18	353.2	0.1
C14	N19	C20	H19	180.0	180.0
C21	C20	N19	O24	183.6	180.0
N19	C20	C21	O22	41.7	180.0
N19	C20	C21	O23	217.6	360.0
C14	N19	H19	C20	180.0	180.0
H19	N19	C20	C21	353.4	360.0
H19	N19	C20	O24	169.8	180.0
C21	C20	N19	H19	353.4	360.0
N19	C20	C21	O24	176.6	180.0
O22	C21	C20	O23	184.2	180.0
C20	C21	O22	H22	180.0	180.0
O24	C20	N19	H19	169.8	180.0
N19	C20	O24	C21	183.9	180.0
O24	C20	C21	O22	225.1	0.0
O24	C20	C21	O23	40.9	180.0
O22	C21	C20	O24	225.1	0.0
C20	C21	O22	O23	175.7	180.0
O23	C21	C20	O24	40.9	180.0
C20	C21	O23	O22	184.0	180.0
O23	C21	O22	H22	4.3	0.0
H22	O22	C21	O23	4.3	0.0