PDB Chemical Component ONH

Ideal Model

Chemical Description

Name N~5~-hydroxy-L-ornithine
Formula C5 H12 N2 O3
Formal charge 0
Molecular weight 148.160 g/mol
Component type L-peptide linking
Nonstandard Parent Id ALA

Chemical features

Atom count 22
Chiral atom count 1
Chiral atoms CA
Observed leaving atoms OXT HN HOXT
Bond count 21
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) N~5~-hydroxy-L-ornithine
Systematic name (OpenEye OEToolkits) (2S)-2-azanyl-5-(oxidanylamino)pentanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) N[C@@H](CCCNO)C(O)=O
SMILES (CACTVS) N[CH](CCCNO)C(O)=O
Stereo SMILES (OpenEye) C(C[C@@H](C(=O)O)N)CNO
InChI descriptor InChI=1S/C5H12N2O3/c6-4(5(8)9)2-1-3-7-10/h4,7,10H,1-3,6H2,(H,8,9)/t4-/m0/s1
InChIKey descriptor OZMJDTPATROLQC-BYPYZUCNSA-N

Status Information

Last modified 2011-07-08
Created 2011-06-02
Release status REL
Model PDB code 3S5W
Processing site RCSB