PDB Chemical Component ONE

Ideal Model

Chemical Description

Name 1-(BETA-D-RIBOFURANOSYL)-PYRIDIN-4-ONE-5'-PHOSPHATE
Formula C10 H14 N O8 P
Formal charge 0
Molecular weight 307.194 g/mol
Component type RNA LINKING
Nonstandard Parent Id U

Chemical features

Atom count 34
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms OP3 HO3
Bond count 35
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 1-(5-O-phosphono-beta-D-ribofuranosyl)pyridin-4(1H)-one
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-3,4-dihydroxy-5-(4-oxopyridin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=CC(=O)C=C2
SMILES (CACTVS) O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)N2C=CC(=O)C=C2
Stereo SMILES (OpenEye) C1=CN(C=CC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O
InChI descriptor InChI=1S/C10H14NO8P/c12-6-1-3-11(4-2-6)10-9(14)8(13)7(19-10)5-18-20(15,16)17/h1-4,7-10,13-14H,5H2,(H2,15,16,17)/t7-,8-,9-,10-/m1/s1
InChIKey descriptor SMHHXNJIRLTYFN-ZYUZMQFOSA-N

Status Information

Last modified 2011-06-04
Created 2000-03-09
Release status REL
Processing site EBI