PDB Chemical Component OHI
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OHI
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CE1 |
ND1 |
1.351 |
1.344 |
| CE1 |
NE2 |
1.345 |
1.344 |
| CE1 |
O12 |
1.283 |
1.212 |
| ND1 |
CG |
1.397 |
1.302 |
| NE2 |
CD2 |
1.362 |
1.302 |
| CD2 |
CG |
1.390 |
1.490 |
| CD2 |
HD2 |
1.080 |
1.080 |
| CG |
CB |
1.530 |
1.507 |
| CB |
CA |
1.506 |
1.530 |
| CB |
HB1 |
1.100 |
1.091 |
| CB |
HB2 |
1.101 |
1.090 |
| CA |
N |
1.486 |
1.468 |
| CA |
C |
1.498 |
1.506 |
| CA |
HA |
1.099 |
1.091 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| C |
O |
1.235 |
1.209 |
| C |
OXT |
|
1.342 |
| OXT |
HXT |
|
0.968 |
Bond Angles for OHI
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| ND1 |
CE1 |
NE2 |
114.8 |
110.5 |
| ND1 |
CE1 |
O12 |
117.1 |
124.7 |
| CE1 |
ND1 |
CG |
101.3 |
108.7 |
| NE2 |
CE1 |
O12 |
128.1 |
124.8 |
| CE1 |
NE2 |
CD2 |
106.7 |
108.8 |
| ND1 |
CG |
CD2 |
111.6 |
106.0 |
| ND1 |
CG |
CB |
127.2 |
127.0 |
| NE2 |
CD2 |
CG |
105.7 |
106.0 |
| NE2 |
CD2 |
HD2 |
127.2 |
127.0 |
| CG |
CD2 |
HD2 |
127.2 |
127.0 |
| CD2 |
CG |
CB |
121.3 |
127.0 |
| CG |
CB |
CA |
106.7 |
109.5 |
| CG |
CB |
HB1 |
110.4 |
109.5 |
| CG |
CB |
HB2 |
111.0 |
109.5 |
| CA |
CB |
HB1 |
110.4 |
109.4 |
| CA |
CB |
HB2 |
111.0 |
109.4 |
| CB |
CA |
N |
110.0 |
109.5 |
| CB |
CA |
C |
111.3 |
109.5 |
| CB |
CA |
HA |
109.5 |
109.5 |
| HB1 |
CB |
HB2 |
107.3 |
109.5 |
| N |
CA |
C |
113.9 |
109.5 |
| N |
CA |
HA |
106.6 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| C |
CA |
HA |
105.2 |
109.4 |
| CA |
C |
O |
116.5 |
120.0 |
| CA |
C |
OXT |
|
120.0 |
| H |
N |
H2 |
109.5 |
111.0 |
| O |
C |
OXT |
|
120.0 |
| C |
OXT |
HXT |
|
117.0 |
Torsion Angles for OHI
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NE2 |
CE1 |
ND1 |
O12 |
178.4 |
180.3 |
| ND1 |
CE1 |
NE2 |
CD2 |
0.6 |
360.0 |
| CE1 |
ND1 |
CG |
CD2 |
0.4 |
0.0 |
| CE1 |
ND1 |
CG |
CB |
180.5 |
180.0 |
| ND1 |
CE1 |
NE2 |
O12 |
181.8 |
179.7 |
| NE2 |
CE1 |
ND1 |
CG |
359.4 |
360.0 |
| CE1 |
NE2 |
CD2 |
CG |
359.7 |
0.0 |
| CE1 |
NE2 |
CD2 |
HD2 |
179.7 |
179.9 |
| ND1 |
CE1 |
O12 |
NE2 |
178.2 |
180.3 |
| O12 |
CE1 |
ND1 |
CG |
181.0 |
179.7 |
| O12 |
CE1 |
NE2 |
CD2 |
178.8 |
180.2 |
| CG |
ND1 |
CE1 |
NE2 |
359.4 |
360.0 |
| CG |
ND1 |
CE1 |
O12 |
181.0 |
179.7 |
| NE2 |
CD2 |
CG |
ND1 |
360.0 |
360.0 |
| ND1 |
CG |
CD2 |
HD2 |
179.9 |
180.1 |
| CD2 |
CG |
ND1 |
CB |
179.9 |
180.1 |
| ND1 |
CG |
CB |
CA |
335.0 |
0.1 |
| ND1 |
CG |
CB |
HB1 |
95.0 |
120.0 |
| ND1 |
CG |
CB |
HB2 |
213.9 |
240.0 |
| CD2 |
NE2 |
CE1 |
O12 |
178.8 |
180.2 |
| ND1 |
CG |
CD2 |
NE2 |
360.0 |
360.0 |
| CG |
CD2 |
NE2 |
HD2 |
180.0 |
180.1 |
| NE2 |
CD2 |
CG |
CB |
179.9 |
180.0 |
| ND1 |
CG |
CD2 |
CB |
180.1 |
179.9 |
| NE2 |
CD2 |
CG |
HD2 |
180.0 |
179.9 |
| CD2 |
CG |
CB |
CA |
155.1 |
180.0 |
| CD2 |
CG |
CB |
HB1 |
275.1 |
299.9 |
| CD2 |
CG |
CB |
HB2 |
34.0 |
60.0 |
| NE2 |
CD2 |
HD2 |
CG |
180.0 |
180.1 |
| HD2 |
CD2 |
CG |
CB |
359.9 |
0.1 |
| ND1 |
CG |
CB |
CD2 |
179.9 |
180.1 |
| CB |
CG |
CD2 |
HD2 |
359.9 |
0.1 |
| CA |
CB |
CG |
HB1 |
240.0 |
240.0 |
| CA |
CB |
CG |
HB2 |
121.1 |
120.0 |
| CG |
CB |
CA |
N |
297.3 |
295.0 |
| CG |
CB |
CA |
C |
170.1 |
174.9 |
| CG |
CB |
CA |
HA |
54.2 |
55.0 |
| HB1 |
CB |
CG |
HB2 |
241.1 |
240.0 |
| CG |
CB |
CA |
HB1 |
120.0 |
120.0 |
| CG |
CB |
CA |
HB2 |
238.9 |
240.0 |
| HB1 |
CB |
CA |
HB2 |
118.9 |
120.0 |
| N |
CA |
CB |
C |
127.2 |
120.1 |
| N |
CA |
CB |
HA |
243.1 |
240.0 |
| CB |
CA |
N |
H |
7.3 |
176.0 |
| CB |
CA |
N |
H2 |
127.4 |
300.0 |
| C |
CA |
CB |
HA |
115.9 |
120.0 |
| CB |
CA |
C |
O |
291.4 |
100.0 |
| CB |
CA |
C |
OXT |
|
280.0 |
| CG |
CB |
HB1 |
CA |
242.3 |
240.0 |
| CG |
CB |
HB1 |
HB2 |
121.1 |
120.0 |
| CA |
CB |
HB1 |
HB2 |
238.8 |
240.0 |
| HB1 |
CB |
CA |
N |
177.3 |
175.0 |
| HB1 |
CB |
CA |
C |
50.1 |
55.0 |
| HB1 |
CB |
CA |
HA |
294.2 |
295.0 |
| CG |
CB |
HB2 |
CA |
118.5 |
120.0 |
| CG |
CB |
HB2 |
HB1 |
239.2 |
240.0 |
| CA |
CB |
HB2 |
HB1 |
120.8 |
119.9 |
| HB2 |
CB |
CA |
N |
58.4 |
55.0 |
| HB2 |
CB |
CA |
C |
291.2 |
295.0 |
| HB2 |
CB |
CA |
HA |
175.3 |
175.0 |
| N |
CA |
CB |
HB1 |
177.3 |
175.0 |
| N |
CA |
CB |
HB2 |
58.4 |
55.0 |
| CB |
CA |
N |
C |
234.2 |
239.9 |
| CB |
CA |
N |
HA |
118.6 |
120.0 |
| C |
CA |
N |
HA |
244.4 |
240.0 |
| N |
CA |
C |
O |
166.3 |
340.0 |
| N |
CA |
C |
OXT |
|
160.0 |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| C |
CA |
CB |
HB1 |
50.1 |
55.0 |
| C |
CA |
CB |
HB2 |
291.2 |
295.0 |
| CB |
CA |
C |
N |
125.1 |
120.0 |
| CB |
CA |
C |
HA |
241.5 |
240.0 |
| N |
CA |
C |
HA |
116.4 |
120.0 |
| C |
CA |
N |
H |
133.1 |
296.1 |
| C |
CA |
N |
H2 |
253.1 |
60.0 |
| O |
C |
CA |
OXT |
|
180.0 |
| CA |
C |
OXT |
HXT |
|
180.0 |
| HA |
CA |
CB |
HB1 |
294.2 |
295.0 |
| HA |
CA |
CB |
HB2 |
175.3 |
175.0 |
| CB |
CA |
HA |
N |
241.0 |
240.0 |
| CB |
CA |
HA |
C |
119.7 |
120.0 |
| N |
CA |
HA |
C |
238.7 |
240.0 |
| HA |
CA |
N |
H |
248.7 |
56.0 |
| HA |
CA |
N |
H2 |
8.7 |
180.0 |
| HA |
CA |
C |
O |
49.8 |
220.0 |
| HA |
CA |
C |
OXT |
|
40.0 |
| H |
N |
CA |
C |
133.1 |
296.1 |
| H |
N |
CA |
HA |
248.7 |
56.0 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H2 |
N |
CA |
C |
253.1 |
60.0 |
| H2 |
N |
CA |
HA |
8.7 |
180.0 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| O |
C |
CA |
HA |
49.8 |
220.0 |
| CA |
C |
O |
OXT |
|
180.0 |
| O |
C |
OXT |
HXT |
|
0.0 |
| OXT |
C |
CA |
HA |
|
40.0 |
| CA |
C |
OXT |
O |
|
180.0 |