PDB Chemical Component OGA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for OGA

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.365	1.493
C1	O1	1.218	1.212
C1	O2	1.253	1.346
C2	O2'	1.252	1.214
C2	N1	1.324	1.347
C4	C5	1.514	1.506
C4	N1	1.467	1.464
C4	H4C1	1.115	1.090
C4	H4C2	1.115	1.090
C5	O3	1.224	1.342
C5	O4	1.210	1.208
O2	H2	0.950	0.966
O3	H3	0.950	0.966
N1	H1	1.020	0.969

Bond Angles for OGA

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	119.1	120.0
C2	C1	O2	122.8	120.1
C1	C2	O2'	123.0	120.0
C1	C2	N1	116.3	120.0
O1	C1	O2	118.0	119.9
C1	O2	H2	122.8	120.1
O2'	C2	N1	120.7	119.9
C2	N1	C4	123.4	120.1
C2	N1	H1	118.3	119.9
C5	C4	N1	116.4	109.5
C5	C4	H4C1	109.7	109.4
C5	C4	H4C2	109.7	109.4
C4	C5	O3	123.0	120.1
C4	C5	O4	117.5	120.0
N1	C4	H4C1	109.7	109.5
N1	C4	H4C2	109.7	109.5
C4	N1	H1	118.3	120.0
H4C1	C4	H4C2	100.5	109.4
O3	C5	O4	119.5	119.9
C5	O3	H3	123.1	120.1

Torsion Angles for OGA

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	O2	180.8	180.0
C2	C1	O2	H2	180.0	180.0
O2'	C2	C1	N1	178.6	180.0
C1	C2	N1	C4	172.7	180.0
C1	C2	N1	H1	352.7	-0.0
C2	C1	O1	O2	179.3	180.0
O1	C1	C2	O2'	180.7	180.0
O1	C1	C2	N1	2.1	-0.0
O1	C1	O2	H2	359.3	-0.0
C2	C1	O2	O1	180.7	180.0
O2	C1	C2	O2'	359.9	360.0
O2	C1	C2	N1	181.3	180.0
O2'	C2	C1	O1	180.7	180.0
O2'	C2	C1	O2	359.9	-0.0
C1	C2	O2'	N1	181.4	180.0
O2'	C2	N1	C4	354.0	360.0
O2'	C2	N1	H1	174.1	180.0
N1	C2	C1	O1	2.1	-0.0
N1	C2	C1	O2	181.3	180.0
C1	C2	N1	O2'	178.7	180.0
C5	C4	N1	C2	153.6	180.0
C2	N1	C4	H4C1	28.4	60.0
C2	N1	C4	H4C2	278.9	300.0
C4	N1	C2	H1	180.0	180.0
C2	N1	C4	C5	153.6	180.0
N1	C4	C5	H4C1	234.7	239.9
N1	C4	C5	H4C2	125.2	120.1
C5	C4	N1	H1	333.6	-0.0
H4C1	C4	C5	H4C2	250.5	240.1
O3	C5	C4	O4	181.6	180.0
C4	C5	O3	H3	180.0	180.0
C2	N1	C4	H1	180.0	180.0
C5	C4	N1	H4C1	125.3	120.0
C5	C4	N1	H4C2	234.8	240.0
N1	C4	C5	O3	3.2	180.0
N1	C4	C5	O4	181.6	-0.0
H4C1	C4	N1	H4C2	109.5	120.0
C5	C4	H4C1	N1	231.0	239.9
C5	C4	H4C1	H4C2	115.5	119.9
H4C1	C4	C5	O3	128.4	300.1
H4C1	C4	C5	O4	306.8	120.1
N1	C4	H4C1	H4C2	244.5	240.0
H4C1	C4	N1	H1	208.3	240.0
C5	C4	H4C2	N1	129.0	120.1
C5	C4	H4C2	H4C1	244.5	240.1
H4C2	C4	C5	O3	237.9	59.9
H4C2	C4	C5	O4	56.3	239.9
N1	C4	H4C2	H4C1	115.5	120.0
H4C2	C4	N1	H1	98.8	120.0
O3	C5	C4	N1	3.2	180.0
O3	C5	C4	H4C1	128.4	300.1
O3	C5	C4	H4C2	237.9	59.9
C4	C5	O3	O4	178.4	180.0
O4	C5	C4	N1	181.6	-0.0
O4	C5	C4	H4C1	306.8	120.1
O4	C5	C4	H4C2	56.3	239.9
C4	C5	O4	O3	181.5	180.0
O4	C5	O3	H3	1.6	-0.0
H3	O3	C5	O4	1.6	360.0
C2	N1	H1	C4	180.0	180.0
H1	N1	C4	H4C1	208.3	240.0
H1	N1	C4	H4C2	98.8	120.0