PDB Chemical Component OCT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for OCT

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.549	1.529
C1	H11	1.116	1.090
C1	H12	1.115	1.090
C1	H13	1.114	1.090
C2	C3	1.548	1.529
C2	H21	1.116	1.090
C2	H22	1.115	1.090
C3	C4	1.554	1.530
C3	H31	1.114	1.090
C3	H32	1.115	1.090
C4	C5	1.556	1.528
C4	H41	1.116	1.090
C4	H42	1.115	1.090
C5	C6	1.553	1.530
C5	H51	1.115	1.090
C5	H52	1.116	1.090
C6	C7	1.558	1.529
C6	H61	1.115	1.090
C6	H62	1.114	1.090
C7	C8	1.551	1.529
C7	H71	1.115	1.090
C7	H72	1.116	1.090
C8	H81	1.115	1.090
C8	H82	1.116	1.090
C8	H83	1.114	1.090

Bond Angles for OCT

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	H11	114.0	109.5
C2	C1	H12	110.5	109.5
C2	C1	H13	110.6	109.5
C1	C2	C3	114.0	109.5
C1	C2	H21	110.5	109.5
C1	C2	H22	110.5	109.5
H11	C1	H12	110.5	109.4
H11	C1	H13	110.5	109.5
H12	C1	H13	99.8	109.4
C3	C2	H21	110.6	109.5
C3	C2	H22	110.6	109.5
C2	C3	C4	114.6	109.5
C2	C3	H31	110.3	109.5
C2	C3	H32	110.3	109.5
H21	C2	H22	99.7	109.5
C4	C3	H31	110.4	109.4
C4	C3	H32	110.4	109.4
C3	C4	C5	114.7	109.5
C3	C4	H41	110.3	109.5
C3	C4	H42	110.3	109.5
H31	C3	H32	100.0	109.5
C5	C4	H41	110.3	109.4
C5	C4	H42	110.3	109.4
C4	C5	C6	115.7	109.5
C4	C5	H51	109.9	109.4
C4	C5	H52	109.9	109.4
H41	C4	H42	99.9	109.5
C6	C5	H51	110.0	109.5
C6	C5	H52	110.0	109.5
C5	C6	C7	114.1	109.5
C5	C6	H61	110.5	109.4
C5	C6	H62	110.5	109.4
H51	C5	H52	100.3	109.5
C7	C6	H61	110.5	109.5
C7	C6	H62	110.5	109.5
C6	C7	C8	113.9	109.5
C6	C7	H71	110.6	109.5
C6	C7	H72	110.6	109.5
H61	C6	H62	99.8	109.5
C8	C7	H71	110.6	109.5
C8	C7	H72	110.6	109.5
C7	C8	H81	113.9	109.5
C7	C8	H82	110.6	109.5
C7	C8	H83	110.6	109.5
H71	C7	H72	99.7	109.5
H81	C8	H82	110.6	109.4
H81	C8	H83	110.6	109.4
H82	C8	H83	99.7	109.5

Torsion Angles for OCT

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H11	C1	C2	H12	234.8	240.0
H11	C1	C2	H13	125.2	120.0
H12	C1	C2	H13	250.5	240.0
C3	C2	C1	H21	234.7	240.0
C3	C2	C1	H22	125.3	120.0
C1	C2	C3	C4	200.6	180.0
C1	C2	C3	H31	325.9	300.0
C1	C2	C3	H32	75.4	60.0
H21	C2	C1	H22	250.6	240.0
C2	C1	H11	H12	125.2	120.0
C2	C1	H11	H13	234.7	240.0
H11	C1	C2	C3	180.0	60.0
H11	C1	C2	H21	305.3	180.0
H11	C1	C2	H22	54.7	300.0
H12	C1	H11	H13	109.5	119.9
C2	C1	H12	H11	232.8	240.0
C2	C1	H12	H13	116.4	120.0
H12	C1	C2	C3	305.2	180.0
H12	C1	C2	H21	70.5	300.0
H12	C1	C2	H22	179.9	60.0
H11	C1	H12	H13	243.6	240.0
C2	C1	H13	H11	127.2	120.0
C2	C1	H13	H12	243.6	240.0
H13	C1	C2	C3	54.7	300.0
H13	C1	C2	H21	180.0	60.0
H13	C1	C2	H22	289.4	180.0
H11	C1	H13	H12	116.4	119.9
C3	C2	C1	H11	180.0	60.0
C3	C2	C1	H12	305.2	180.0
C3	C2	C1	H13	54.7	300.0
C1	C2	C3	H21	125.2	120.0
C1	C2	C3	H22	234.7	240.0
H21	C2	C3	H22	109.5	120.0
C4	C3	C2	H31	234.7	240.0
C4	C3	C2	H32	125.3	120.0
C2	C3	C4	C5	202.3	180.0
C2	C3	C4	H41	327.6	300.0
C2	C3	C4	H42	77.0	60.0
H31	C3	C2	H32	250.5	239.9
H21	C2	C1	H11	305.3	180.0
H21	C2	C1	H12	70.5	300.0
H21	C2	C1	H13	180.0	60.0
C1	C2	H21	C3	232.8	240.0
C1	C2	H21	H22	116.3	120.0
C3	C2	H21	H22	243.5	240.0
H21	C2	C3	C4	75.4	60.0
H21	C2	C3	H31	200.7	179.9
H21	C2	C3	H32	310.1	300.0
H22	C2	C1	H11	54.7	300.0
H22	C2	C1	H12	179.9	60.0
H22	C2	C1	H13	289.4	180.0
C1	C2	H22	C3	127.2	120.0
C1	C2	H22	H21	243.7	240.0
C3	C2	H22	H21	116.4	120.0
H22	C2	C3	C4	325.9	300.0
H22	C2	C3	H31	91.2	60.0
H22	C2	C3	H32	200.7	180.1
C4	C3	C2	H21	75.4	60.0
C4	C3	C2	H22	325.9	300.0
C2	C3	C4	H31	125.2	120.0
C2	C3	C4	H32	234.8	240.0
H31	C3	C4	H32	109.5	120.0
C5	C4	C3	H41	234.7	240.0
C5	C4	C3	H42	125.3	120.0
C3	C4	C5	C6	226.3	180.0
C3	C4	C5	H51	351.6	300.0
C3	C4	C5	H52	101.0	60.0
H41	C4	C3	H42	250.6	240.0
H31	C3	C2	H21	200.7	179.9
H31	C3	C2	H22	91.2	60.0
C2	C3	H31	C4	232.4	240.0
C2	C3	H31	H32	116.2	120.0
C4	C3	H31	H32	243.8	240.1
H31	C3	C4	C5	77.1	60.0
H31	C3	C4	H41	202.4	180.0
H31	C3	C4	H42	311.8	300.0
H32	C3	C2	H21	310.1	300.0
H32	C3	C2	H22	200.7	180.1
C2	C3	H32	C4	127.6	120.0
C2	C3	H32	H31	243.9	240.0
C4	C3	H32	H31	116.2	119.9
H32	C3	C4	C5	327.6	300.0
H32	C3	C4	H41	92.9	60.0
H32	C3	C4	H42	202.2	180.0
C5	C4	C3	H31	77.1	60.0
C5	C4	C3	H32	327.6	300.0
C3	C4	C5	H41	125.3	120.0
C3	C4	C5	H42	234.7	240.0
H41	C4	C5	H42	109.4	120.0
C6	C5	C4	H51	234.7	240.0
C6	C5	C4	H52	125.3	120.0
C4	C5	C6	C7	232.6	180.0
C4	C5	C6	H61	357.8	300.0
C4	C5	C6	H62	107.3	60.0
H51	C5	C4	H52	250.5	240.0
H41	C4	C3	H31	202.4	180.0
H41	C4	C3	H32	92.9	60.0
C3	C4	H41	C5	232.2	239.9
C3	C4	H41	H42	116.1	120.0
C5	C4	H41	H42	243.8	240.1
H41	C4	C5	C6	101.0	60.0
H41	C4	C5	H51	226.3	180.0
H41	C4	C5	H52	335.8	300.0
H42	C4	C3	H31	311.8	300.0
H42	C4	C3	H32	202.2	180.0
C3	C4	H42	C5	127.8	120.1
C3	C4	H42	H41	244.0	240.0
C5	C4	H42	H41	116.2	119.9
H42	C4	C5	C6	351.6	300.0
H42	C4	C5	H51	116.9	60.0
H42	C4	C5	H52	226.3	180.0
C6	C5	C4	H41	101.0	60.0
C6	C5	C4	H42	351.6	300.0
C4	C5	C6	H51	125.3	120.0
C4	C5	C6	H52	234.8	240.0
H51	C5	C6	H52	109.5	120.0
C7	C6	C5	H61	234.8	240.0
C7	C6	C5	H62	125.3	120.0
C5	C6	C7	C8	168.0	180.0
C5	C6	C7	H71	293.3	300.0
C5	C6	C7	H72	42.8	60.0
H61	C6	C5	H62	250.5	240.0
H51	C5	C4	H41	226.3	180.0
H51	C5	C4	H42	116.9	60.0
C4	C5	H51	C6	231.5	239.9
C4	C5	H51	H52	115.7	119.9
C6	C5	H51	H52	244.2	240.0
H51	C5	C6	C7	107.3	60.0
H51	C5	C6	H61	232.5	180.0
H51	C5	C6	H62	342.0	300.0
H52	C5	C4	H41	335.8	300.0
H52	C5	C4	H42	226.3	180.0
C4	C5	H52	C6	128.4	120.1
C4	C5	H52	H51	244.3	240.1
C6	C5	H52	H51	115.8	120.0
H52	C5	C6	C7	357.8	300.0
H52	C5	C6	H61	123.0	60.0
H52	C5	C6	H62	232.5	180.0
C7	C6	C5	H51	107.3	60.0
C7	C6	C5	H52	357.8	300.0
C5	C6	C7	H61	125.2	120.0
C5	C6	C7	H62	234.7	240.0
H61	C6	C7	H62	109.5	120.1
C8	C7	C6	H71	234.7	240.0
C8	C7	C6	H72	125.2	120.0
C6	C7	C8	H81	180.0	180.0
C6	C7	C8	H82	305.2	300.0
C6	C7	C8	H83	54.7	60.0
H71	C7	C6	H72	250.5	240.0
H61	C6	C5	H51	232.5	180.0
H61	C6	C5	H52	123.0	60.0
C5	C6	H61	C7	232.7	240.0
C5	C6	H61	H62	116.3	119.9
C7	C6	H61	H62	243.6	240.0
H61	C6	C7	C8	42.8	60.0
H61	C6	C7	H71	168.1	180.1
H61	C6	C7	H72	277.6	300.0
H62	C6	C5	H51	342.0	300.0
H62	C6	C5	H52	232.5	180.0
C5	C6	H62	C7	127.3	120.0
C5	C6	H62	H61	243.7	240.1
C7	C6	H62	H61	116.4	120.0
H62	C6	C7	C8	293.3	300.0
H62	C6	C7	H71	58.6	60.0
H62	C6	C7	H72	168.0	179.9
C8	C7	C6	H61	42.8	60.0
C8	C7	C6	H62	293.3	300.0
C6	C7	C8	H71	125.3	120.0
C6	C7	C8	H72	234.8	240.0
H71	C7	C8	H72	109.5	120.0
H81	C8	C7	H82	234.8	240.0
H81	C8	C7	H83	125.3	120.0
H82	C8	C7	H83	250.5	240.0
H71	C7	C6	H61	168.1	180.1
H71	C7	C6	H62	58.6	60.0
C6	C7	H71	C8	232.9	240.0
C6	C7	H71	H72	116.4	120.0
C8	C7	H71	H72	243.6	240.0
H71	C7	C8	H81	54.8	60.0
H71	C7	C8	H82	180.0	180.0
H71	C7	C8	H83	289.5	300.0
H72	C7	C6	H61	277.6	300.0
H72	C7	C6	H62	168.0	179.9
C6	C7	H72	C8	127.1	120.0
C6	C7	H72	H71	243.6	240.0
C8	C7	H72	H71	116.5	120.0
H72	C7	C8	H81	305.2	300.0
H72	C7	C8	H82	70.4	60.0
H72	C7	C8	H83	179.9	180.0
H81	C8	C7	H71	54.8	60.0
H81	C8	C7	H72	305.2	300.0
C7	C8	H81	H82	125.2	120.0
C7	C8	H81	H83	234.7	240.0
H82	C8	H81	H83	109.6	120.0
H82	C8	C7	H71	180.0	180.0
H82	C8	C7	H72	70.4	60.0
C7	C8	H82	H81	232.9	240.0
C7	C8	H82	H83	116.4	120.0
H81	C8	H82	H83	243.5	240.1
H83	C8	C7	H71	289.5	300.0
H83	C8	C7	H72	179.9	180.0
C7	C8	H83	H81	127.1	120.0
C7	C8	H83	H82	243.6	240.0
H81	C8	H83	H82	116.5	119.9