PDB Chemical Component OCS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OCS
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.487 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
CB |
1.515 |
1.530 |
| CA |
C |
1.523 |
1.507 |
| CA |
HA |
1.100 |
1.090 |
| CB |
SG |
1.808 |
1.814 |
| CB |
HB2 |
1.100 |
1.090 |
| CB |
HB3 |
1.100 |
1.090 |
| SG |
OD1 |
1.477 |
1.421 |
| SG |
OD2 |
1.496 |
1.521 |
| SG |
OD3 |
1.494 |
1.421 |
| C |
O |
1.220 |
1.208 |
| C |
OXT |
1.330 |
1.343 |
| OXT |
HXT |
0.950 |
0.967 |
| OD2 |
HD2 |
0.950 |
0.968 |
Bond Angles for OCS
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| N |
CA |
CB |
114.0 |
109.5 |
| N |
CA |
C |
112.2 |
109.4 |
| N |
CA |
HA |
109.4 |
109.5 |
| H |
N |
H2 |
109.5 |
111.0 |
| CB |
CA |
C |
102.9 |
109.5 |
| CB |
CA |
HA |
109.0 |
109.5 |
| CA |
CB |
SG |
114.7 |
109.5 |
| CA |
CB |
HB2 |
108.1 |
109.5 |
| CA |
CB |
HB3 |
108.2 |
109.5 |
| C |
CA |
HA |
108.9 |
109.5 |
| CA |
C |
O |
118.9 |
120.0 |
| CA |
C |
OXT |
117.0 |
120.0 |
| SG |
CB |
HB2 |
108.1 |
109.5 |
| SG |
CB |
HB3 |
108.1 |
109.4 |
| CB |
SG |
OD1 |
106.8 |
110.6 |
| CB |
SG |
OD2 |
106.8 |
104.5 |
| CB |
SG |
OD3 |
110.8 |
110.5 |
| HB2 |
CB |
HB3 |
109.4 |
109.5 |
| OD1 |
SG |
OD2 |
115.0 |
104.3 |
| OD1 |
SG |
OD3 |
112.2 |
121.0 |
| OD2 |
SG |
OD3 |
105.1 |
104.3 |
| SG |
OD2 |
HD2 |
109.5 |
114.0 |
| O |
C |
OXT |
124.1 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
Torsion Angles for OCS
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| CB |
CA |
N |
C |
243.5 |
240.0 |
| CB |
CA |
N |
HA |
122.4 |
120.0 |
| N |
CA |
CB |
SG |
313.4 |
300.0 |
| N |
CA |
CB |
HB2 |
74.2 |
60.0 |
| N |
CA |
CB |
HB3 |
192.7 |
180.0 |
| C |
CA |
N |
HA |
238.9 |
240.0 |
| N |
CA |
C |
O |
314.5 |
340.1 |
| N |
CA |
C |
OXT |
137.0 |
160.0 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| H |
N |
CA |
CB |
180.0 |
176.1 |
| H |
N |
CA |
C |
296.5 |
296.0 |
| H |
N |
CA |
HA |
57.6 |
56.0 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |
| H2 |
N |
CA |
CB |
300.0 |
300.0 |
| H2 |
N |
CA |
C |
56.6 |
60.0 |
| H2 |
N |
CA |
HA |
177.6 |
180.0 |
| CB |
CA |
N |
H |
180.0 |
176.1 |
| CB |
CA |
N |
H2 |
300.0 |
300.0 |
| N |
CA |
CB |
C |
121.8 |
120.0 |
| N |
CA |
CB |
HA |
237.4 |
240.0 |
| C |
CA |
CB |
HA |
115.6 |
120.0 |
| CB |
CA |
C |
O |
77.5 |
100.0 |
| CB |
CA |
C |
OXT |
260.1 |
280.0 |
| SG |
CB |
CA |
HB2 |
239.2 |
240.0 |
| SG |
CB |
CA |
HB3 |
120.8 |
119.9 |
| CA |
CB |
SG |
OD1 |
333.0 |
68.4 |
| CA |
CB |
SG |
OD2 |
96.6 |
180.0 |
| CA |
CB |
SG |
OD3 |
210.5 |
291.7 |
| HB2 |
CB |
CA |
HB3 |
241.6 |
240.0 |
| C |
CA |
N |
H |
296.5 |
296.0 |
| C |
CA |
N |
H2 |
56.6 |
60.0 |
| N |
CA |
C |
CB |
237.0 |
240.0 |
| N |
CA |
C |
HA |
121.3 |
120.0 |
| CB |
CA |
C |
HA |
244.4 |
239.9 |
| C |
CA |
CB |
SG |
191.6 |
180.0 |
| C |
CA |
CB |
HB2 |
312.4 |
300.0 |
| C |
CA |
CB |
HB3 |
70.8 |
60.1 |
| O |
C |
CA |
OXT |
177.4 |
180.0 |
| CA |
C |
OXT |
HXT |
177.3 |
180.0 |
| HA |
CA |
N |
H |
57.6 |
56.0 |
| HA |
CA |
N |
H2 |
177.6 |
180.0 |
| N |
CA |
HA |
CB |
125.3 |
120.0 |
| N |
CA |
HA |
C |
237.0 |
240.0 |
| CB |
CA |
HA |
C |
111.6 |
120.0 |
| HA |
CA |
CB |
SG |
76.1 |
60.0 |
| HA |
CA |
CB |
HB2 |
196.8 |
180.0 |
| HA |
CA |
CB |
HB3 |
315.3 |
300.0 |
| HA |
CA |
C |
O |
193.1 |
220.1 |
| HA |
CA |
C |
OXT |
15.7 |
40.0 |
| SG |
CB |
CA |
C |
191.6 |
180.0 |
| SG |
CB |
CA |
HA |
76.1 |
60.0 |
| CA |
CB |
SG |
HB2 |
120.8 |
120.0 |
| CA |
CB |
SG |
HB3 |
239.2 |
240.1 |
| HB2 |
CB |
SG |
HB3 |
118.4 |
120.0 |
| OD1 |
SG |
CB |
OD2 |
236.4 |
248.4 |
| OD1 |
SG |
CB |
OD3 |
122.5 |
136.7 |
| OD2 |
SG |
CB |
OD3 |
246.1 |
248.4 |
| CB |
SG |
OD2 |
HD2 |
117.7 |
180.0 |
| HB2 |
CB |
CA |
C |
312.4 |
300.0 |
| HB2 |
CB |
CA |
HA |
196.8 |
180.0 |
| CA |
CB |
HB2 |
SG |
235.2 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
117.6 |
120.0 |
| SG |
CB |
HB2 |
HB3 |
242.4 |
240.0 |
| HB2 |
CB |
SG |
OD1 |
212.2 |
308.3 |
| HB2 |
CB |
SG |
OD2 |
335.8 |
60.0 |
| HB2 |
CB |
SG |
OD3 |
89.7 |
171.6 |
| HB3 |
CB |
CA |
C |
70.8 |
60.1 |
| HB3 |
CB |
CA |
HA |
315.3 |
300.0 |
| CA |
CB |
HB3 |
SG |
124.8 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
242.4 |
240.0 |
| SG |
CB |
HB3 |
HB2 |
117.6 |
120.0 |
| HB3 |
CB |
SG |
OD1 |
93.8 |
188.3 |
| HB3 |
CB |
SG |
OD2 |
217.4 |
300.0 |
| HB3 |
CB |
SG |
OD3 |
331.3 |
51.6 |
| OD1 |
SG |
CB |
HB2 |
212.2 |
308.3 |
| OD1 |
SG |
CB |
HB3 |
93.8 |
188.3 |
| CB |
SG |
OD1 |
OD2 |
118.4 |
111.7 |
| CB |
SG |
OD1 |
OD3 |
238.4 |
228.5 |
| OD2 |
SG |
OD1 |
OD3 |
120.0 |
116.8 |
| OD1 |
SG |
OD2 |
HD2 |
236.1 |
296.1 |
| OD2 |
SG |
CB |
HB2 |
335.8 |
60.0 |
| OD2 |
SG |
CB |
HB3 |
217.4 |
300.0 |
| CB |
SG |
OD2 |
OD1 |
241.6 |
243.9 |
| CB |
SG |
OD2 |
OD3 |
117.8 |
116.1 |
| OD1 |
SG |
OD2 |
OD3 |
236.1 |
232.1 |
| OD3 |
SG |
CB |
HB2 |
89.7 |
171.6 |
| OD3 |
SG |
CB |
HB3 |
331.3 |
51.6 |
| CB |
SG |
OD3 |
OD1 |
119.3 |
131.5 |
| CB |
SG |
OD3 |
OD2 |
245.0 |
248.3 |
| OD1 |
SG |
OD3 |
OD2 |
125.7 |
116.8 |
| OD3 |
SG |
OD2 |
HD2 |
360.0 |
64.0 |
| O |
C |
CA |
HA |
193.1 |
220.1 |
| CA |
C |
O |
OXT |
182.8 |
180.0 |
| O |
C |
OXT |
HXT |
0.0 |
360.0 |
| OXT |
C |
CA |
HA |
15.7 |
40.0 |
| CA |
C |
OXT |
O |
177.3 |
180.0 |
| HD2 |
OD2 |
SG |
OD3 |
360.0 |
64.0 |