PDB Chemical Component OCA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OCA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.515 |
1.512 |
C1 |
O1 |
1.248 |
1.223 |
C1 |
O2 |
|
1.359 |
C2 |
C3 |
1.522 |
1.529 |
C2 |
H21 |
1.100 |
1.095 |
C2 |
H22 |
1.100 |
1.095 |
C3 |
C4 |
1.528 |
1.532 |
C3 |
H31 |
1.100 |
1.098 |
C3 |
H32 |
1.100 |
1.096 |
C4 |
C5 |
1.522 |
1.532 |
C4 |
H41 |
1.100 |
1.097 |
C4 |
H42 |
1.101 |
1.097 |
C5 |
C6 |
1.515 |
1.530 |
C5 |
H51 |
1.100 |
1.097 |
C5 |
H52 |
1.100 |
1.096 |
C6 |
C7 |
1.526 |
1.530 |
C6 |
H61 |
1.099 |
1.096 |
C6 |
H62 |
1.100 |
1.097 |
C7 |
C8 |
1.522 |
1.521 |
C7 |
H71 |
1.100 |
1.095 |
C7 |
H72 |
1.100 |
1.095 |
C8 |
H81 |
1.101 |
1.095 |
C8 |
H82 |
1.100 |
1.094 |
C8 |
H83 |
1.100 |
1.094 |
O2 |
HO2 |
|
0.982 |
Bond Angles for OCA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
117.9 |
125.5 |
C2 |
C1 |
O2 |
|
111.3 |
C1 |
C2 |
C3 |
112.8 |
111.8 |
C1 |
C2 |
H21 |
107.6 |
108.2 |
C1 |
C2 |
H22 |
108.4 |
107.7 |
O1 |
C1 |
O2 |
|
123.1 |
C1 |
O2 |
HO2 |
|
114.9 |
C3 |
C2 |
H21 |
107.6 |
109.6 |
C3 |
C2 |
H22 |
108.4 |
110.2 |
C2 |
C3 |
C4 |
112.4 |
113.4 |
C2 |
C3 |
H31 |
107.8 |
109.2 |
C2 |
C3 |
H32 |
108.5 |
109.9 |
H21 |
C2 |
H22 |
112.1 |
109.3 |
C4 |
C3 |
H31 |
107.8 |
108.0 |
C4 |
C3 |
H32 |
108.5 |
110.2 |
C3 |
C4 |
C5 |
110.2 |
115.8 |
C3 |
C4 |
H41 |
109.1 |
108.8 |
C3 |
C4 |
H42 |
109.2 |
108.4 |
H31 |
C3 |
H32 |
111.8 |
105.8 |
C5 |
C4 |
H41 |
109.1 |
108.4 |
C5 |
C4 |
H42 |
109.2 |
108.9 |
C4 |
C5 |
C6 |
111.6 |
113.4 |
C4 |
C5 |
H51 |
108.3 |
108.0 |
C4 |
C5 |
H52 |
108.8 |
110.0 |
H41 |
C4 |
H42 |
110.0 |
106.3 |
C6 |
C5 |
H51 |
108.3 |
109.1 |
C6 |
C5 |
H52 |
108.8 |
109.8 |
C5 |
C6 |
C7 |
111.3 |
111.2 |
C5 |
C6 |
H61 |
108.5 |
110.1 |
C5 |
C6 |
H62 |
108.8 |
109.6 |
H51 |
C5 |
H52 |
111.1 |
106.2 |
C7 |
C6 |
H61 |
108.5 |
109.0 |
C7 |
C6 |
H62 |
108.9 |
109.5 |
C6 |
C7 |
C8 |
114.4 |
111.5 |
C6 |
C7 |
H71 |
106.7 |
109.9 |
C6 |
C7 |
H72 |
107.9 |
109.8 |
H61 |
C6 |
H62 |
110.9 |
107.3 |
C8 |
C7 |
H71 |
106.7 |
109.1 |
C8 |
C7 |
H72 |
107.8 |
109.2 |
C7 |
C8 |
H81 |
109.5 |
111.0 |
C7 |
C8 |
H82 |
109.5 |
110.2 |
C7 |
C8 |
H83 |
109.5 |
111.0 |
H71 |
C7 |
H72 |
113.4 |
107.3 |
H81 |
C8 |
H82 |
109.5 |
108.1 |
H81 |
C8 |
H83 |
109.5 |
108.3 |
H82 |
C8 |
H83 |
109.5 |
108.1 |
Torsion Angles for OCA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O2 |
|
180.2 |
C2 |
C1 |
O2 |
HO2 |
|
180.3 |
C3 |
C2 |
C1 |
H21 |
118.6 |
239.2 |
C3 |
C2 |
C1 |
H22 |
240.0 |
121.2 |
C1 |
C2 |
C3 |
C4 |
294.2 |
180.5 |
C1 |
C2 |
C3 |
H31 |
175.5 |
60.1 |
C1 |
C2 |
C3 |
H32 |
54.2 |
304.4 |
H21 |
C2 |
C1 |
H22 |
121.4 |
242.0 |
C2 |
C1 |
O1 |
O2 |
|
179.8 |
O1 |
C1 |
C2 |
C3 |
290.9 |
359.2 |
O1 |
C1 |
C2 |
H21 |
172.3 |
120.0 |
O1 |
C1 |
C2 |
H22 |
50.9 |
238.0 |
O1 |
C1 |
O2 |
HO2 |
|
0.1 |
C2 |
C1 |
O2 |
O1 |
|
180.2 |
O2 |
C1 |
C2 |
C3 |
|
179.0 |
O2 |
C1 |
C2 |
H21 |
|
299.8 |
O2 |
C1 |
C2 |
H22 |
|
57.8 |
C3 |
C2 |
C1 |
O1 |
290.9 |
359.2 |
C3 |
C2 |
C1 |
O2 |
|
179.0 |
C1 |
C2 |
C3 |
H21 |
241.4 |
120.0 |
C1 |
C2 |
C3 |
H22 |
120.0 |
240.3 |
H21 |
C2 |
C3 |
H22 |
238.6 |
120.3 |
C4 |
C3 |
C2 |
H31 |
118.7 |
120.4 |
C4 |
C3 |
C2 |
H32 |
240.0 |
236.2 |
C2 |
C3 |
C4 |
C5 |
185.6 |
182.3 |
C2 |
C3 |
C4 |
H41 |
65.8 |
60.0 |
C2 |
C3 |
C4 |
H42 |
305.6 |
304.9 |
H31 |
C3 |
C2 |
H32 |
121.3 |
115.7 |
H21 |
C2 |
C1 |
O1 |
172.3 |
120.0 |
H21 |
C2 |
C1 |
O2 |
|
299.8 |
C1 |
C2 |
H21 |
C3 |
121.9 |
237.8 |
C1 |
C2 |
H21 |
H22 |
240.9 |
117.0 |
C3 |
C2 |
H21 |
H22 |
119.1 |
239.2 |
H21 |
C2 |
C3 |
C4 |
52.8 |
60.5 |
H21 |
C2 |
C3 |
H31 |
294.0 |
300.1 |
H21 |
C2 |
C3 |
H32 |
172.7 |
184.4 |
H22 |
C2 |
C1 |
O1 |
50.9 |
238.0 |
H22 |
C2 |
C1 |
O2 |
|
57.8 |
C1 |
C2 |
H22 |
C3 |
237.3 |
122.2 |
C1 |
C2 |
H22 |
H21 |
118.6 |
242.7 |
C3 |
C2 |
H22 |
H21 |
241.4 |
120.5 |
H22 |
C2 |
C3 |
C4 |
174.2 |
300.3 |
H22 |
C2 |
C3 |
H31 |
55.4 |
179.8 |
H22 |
C2 |
C3 |
H32 |
294.2 |
64.1 |
C4 |
C3 |
C2 |
H21 |
52.8 |
60.5 |
C4 |
C3 |
C2 |
H22 |
174.2 |
300.3 |
C2 |
C3 |
C4 |
H31 |
241.3 |
238.9 |
C2 |
C3 |
C4 |
H32 |
120.0 |
123.7 |
H31 |
C3 |
C4 |
H32 |
238.7 |
244.9 |
C5 |
C4 |
C3 |
H41 |
119.7 |
122.3 |
C5 |
C4 |
C3 |
H42 |
240.0 |
237.4 |
C3 |
C4 |
C5 |
C6 |
162.3 |
179.0 |
C3 |
C4 |
C5 |
H51 |
43.1 |
300.0 |
C3 |
C4 |
C5 |
H52 |
282.3 |
55.5 |
H41 |
C4 |
C3 |
H42 |
120.3 |
115.1 |
H31 |
C3 |
C2 |
H21 |
294.0 |
300.1 |
H31 |
C3 |
C2 |
H22 |
55.4 |
179.8 |
C2 |
C3 |
H31 |
C4 |
121.6 |
123.7 |
C2 |
C3 |
H31 |
H32 |
240.8 |
241.7 |
C4 |
C3 |
H31 |
H32 |
119.2 |
118.0 |
H31 |
C3 |
C4 |
C5 |
304.3 |
303.4 |
H31 |
C3 |
C4 |
H41 |
184.6 |
181.2 |
H31 |
C3 |
C4 |
H42 |
64.3 |
66.0 |
H32 |
C3 |
C2 |
H21 |
172.7 |
184.4 |
H32 |
C3 |
C2 |
H22 |
294.2 |
64.1 |
C2 |
C3 |
H32 |
C4 |
237.6 |
234.3 |
C2 |
C3 |
H32 |
H31 |
118.8 |
117.8 |
C4 |
C3 |
H32 |
H31 |
241.2 |
243.5 |
H32 |
C3 |
C4 |
C5 |
65.6 |
58.6 |
H32 |
C3 |
C4 |
H41 |
305.8 |
296.3 |
H32 |
C3 |
C4 |
H42 |
185.6 |
181.2 |
C5 |
C4 |
C3 |
H31 |
304.3 |
303.4 |
C5 |
C4 |
C3 |
H32 |
65.6 |
58.6 |
C3 |
C4 |
C5 |
H41 |
240.3 |
237.5 |
C3 |
C4 |
C5 |
H42 |
120.0 |
122.3 |
H41 |
C4 |
C5 |
H42 |
239.7 |
244.8 |
C6 |
C5 |
C4 |
H51 |
119.1 |
239.0 |
C6 |
C5 |
C4 |
H52 |
240.0 |
123.5 |
C4 |
C5 |
C6 |
C7 |
196.0 |
180.3 |
C4 |
C5 |
C6 |
H61 |
76.7 |
301.3 |
C4 |
C5 |
C6 |
H62 |
315.9 |
59.1 |
H51 |
C5 |
C4 |
H52 |
120.9 |
244.5 |
H41 |
C4 |
C3 |
H31 |
184.6 |
181.2 |
H41 |
C4 |
C3 |
H32 |
305.8 |
296.3 |
C3 |
C4 |
H41 |
C5 |
120.4 |
126.6 |
C3 |
C4 |
H41 |
H42 |
240.2 |
243.5 |
C5 |
C4 |
H41 |
H42 |
119.8 |
116.9 |
H41 |
C4 |
C5 |
C6 |
282.0 |
301.5 |
H41 |
C4 |
C5 |
H51 |
162.8 |
62.5 |
H41 |
C4 |
C5 |
H52 |
42.0 |
178.0 |
H42 |
C4 |
C3 |
H31 |
64.3 |
66.0 |
H42 |
C4 |
C3 |
H32 |
185.6 |
181.2 |
C3 |
C4 |
H42 |
C5 |
239.4 |
233.3 |
C3 |
C4 |
H42 |
H41 |
119.7 |
116.8 |
C5 |
C4 |
H42 |
H41 |
240.3 |
243.5 |
H42 |
C4 |
C5 |
C6 |
42.3 |
56.7 |
H42 |
C4 |
C5 |
H51 |
283.1 |
177.7 |
H42 |
C4 |
C5 |
H52 |
162.3 |
293.2 |
C6 |
C5 |
C4 |
H41 |
282.0 |
301.5 |
C6 |
C5 |
C4 |
H42 |
42.3 |
56.7 |
C4 |
C5 |
C6 |
H51 |
240.9 |
120.4 |
C4 |
C5 |
C6 |
H52 |
120.0 |
236.4 |
H51 |
C5 |
C6 |
H52 |
239.1 |
116.0 |
C7 |
C6 |
C5 |
H61 |
119.2 |
239.1 |
C7 |
C6 |
C5 |
H62 |
240.0 |
121.3 |
C5 |
C6 |
C7 |
C8 |
60.9 |
181.6 |
C5 |
C6 |
C7 |
H71 |
303.1 |
302.6 |
C5 |
C6 |
C7 |
H72 |
180.9 |
60.4 |
H61 |
C6 |
C5 |
H62 |
120.8 |
242.2 |
H51 |
C5 |
C4 |
H41 |
162.8 |
62.5 |
H51 |
C5 |
C4 |
H42 |
283.1 |
177.7 |
C4 |
C5 |
H51 |
C6 |
121.1 |
236.3 |
C4 |
C5 |
H51 |
H52 |
240.6 |
118.0 |
C6 |
C5 |
H51 |
H52 |
119.4 |
241.7 |
H51 |
C5 |
C6 |
C7 |
315.0 |
60.0 |
H51 |
C5 |
C6 |
H61 |
195.8 |
180.9 |
H51 |
C5 |
C6 |
H62 |
75.0 |
298.7 |
H52 |
C5 |
C4 |
H41 |
42.0 |
178.0 |
H52 |
C5 |
C4 |
H42 |
162.3 |
293.2 |
C4 |
C5 |
H52 |
C6 |
238.3 |
125.6 |
C4 |
C5 |
H52 |
H51 |
119.1 |
243.4 |
C6 |
C5 |
H52 |
H51 |
240.8 |
117.8 |
H52 |
C5 |
C6 |
C7 |
75.9 |
303.9 |
H52 |
C5 |
C6 |
H61 |
316.7 |
64.9 |
H52 |
C5 |
C6 |
H62 |
195.9 |
182.7 |
C7 |
C6 |
C5 |
H51 |
315.0 |
60.0 |
C7 |
C6 |
C5 |
H52 |
75.9 |
303.9 |
C5 |
C6 |
C7 |
H61 |
240.8 |
121.6 |
C5 |
C6 |
C7 |
H62 |
120.0 |
238.7 |
H61 |
C6 |
C7 |
H62 |
239.2 |
117.1 |
C8 |
C7 |
C6 |
H71 |
117.8 |
238.9 |
C8 |
C7 |
C6 |
H72 |
240.0 |
121.1 |
C6 |
C7 |
C8 |
H81 |
304.5 |
299.8 |
C6 |
C7 |
C8 |
H82 |
184.5 |
180.1 |
C6 |
C7 |
C8 |
H83 |
64.5 |
60.3 |
H71 |
C7 |
C6 |
H72 |
122.2 |
242.2 |
H61 |
C6 |
C5 |
H51 |
195.8 |
180.9 |
H61 |
C6 |
C5 |
H52 |
316.7 |
64.9 |
C5 |
C6 |
H61 |
C7 |
121.0 |
237.8 |
C5 |
C6 |
H61 |
H62 |
240.5 |
119.2 |
C7 |
C6 |
H61 |
H62 |
119.5 |
241.5 |
H61 |
C6 |
C7 |
C8 |
180.1 |
60.0 |
H61 |
C6 |
C7 |
H71 |
62.4 |
181.1 |
H61 |
C6 |
C7 |
H72 |
300.1 |
298.9 |
H62 |
C6 |
C5 |
H51 |
75.0 |
298.7 |
H62 |
C6 |
C5 |
H52 |
195.9 |
182.7 |
C5 |
C6 |
H62 |
C7 |
238.5 |
122.3 |
C5 |
C6 |
H62 |
H61 |
119.3 |
240.5 |
C7 |
C6 |
H62 |
H61 |
240.7 |
118.2 |
H62 |
C6 |
C7 |
C8 |
300.9 |
302.9 |
H62 |
C6 |
C7 |
H71 |
183.2 |
64.0 |
H62 |
C6 |
C7 |
H72 |
60.9 |
181.8 |
C8 |
C7 |
C6 |
H61 |
180.1 |
60.0 |
C8 |
C7 |
C6 |
H62 |
300.9 |
302.9 |
C6 |
C7 |
C8 |
H71 |
242.2 |
121.5 |
C6 |
C7 |
C8 |
H72 |
120.0 |
238.5 |
H71 |
C7 |
C8 |
H72 |
237.8 |
116.9 |
H81 |
C8 |
C7 |
H82 |
120.0 |
119.7 |
H81 |
C8 |
C7 |
H83 |
240.0 |
239.5 |
H82 |
C8 |
C7 |
H83 |
120.0 |
119.7 |
H71 |
C7 |
C6 |
H61 |
62.4 |
181.1 |
H71 |
C7 |
C6 |
H62 |
183.2 |
64.0 |
C6 |
C7 |
H71 |
C8 |
122.8 |
237.5 |
C6 |
C7 |
H71 |
H72 |
241.3 |
119.4 |
C8 |
C7 |
H71 |
H72 |
118.6 |
241.9 |
H71 |
C7 |
C8 |
H81 |
62.3 |
178.3 |
H71 |
C7 |
C8 |
H82 |
302.3 |
58.5 |
H71 |
C7 |
C8 |
H83 |
182.3 |
298.8 |
H72 |
C7 |
C6 |
H61 |
300.1 |
298.9 |
H72 |
C7 |
C6 |
H62 |
60.9 |
181.8 |
C6 |
C7 |
H72 |
C8 |
235.9 |
122.5 |
C6 |
C7 |
H72 |
H71 |
118.0 |
240.6 |
C8 |
C7 |
H72 |
H71 |
242.1 |
118.1 |
H72 |
C7 |
C8 |
H81 |
184.5 |
61.3 |
H72 |
C7 |
C8 |
H82 |
64.5 |
301.6 |
H72 |
C7 |
C8 |
H83 |
304.5 |
181.9 |
H81 |
C8 |
C7 |
H71 |
62.3 |
178.3 |
H81 |
C8 |
C7 |
H72 |
184.5 |
61.3 |
C7 |
C8 |
H81 |
H82 |
240.0 |
239.0 |
C7 |
C8 |
H81 |
H83 |
120.0 |
122.1 |
H82 |
C8 |
H81 |
H83 |
240.0 |
243.1 |
H82 |
C8 |
C7 |
H71 |
302.3 |
58.5 |
H82 |
C8 |
C7 |
H72 |
64.5 |
301.6 |
C7 |
C8 |
H82 |
H81 |
120.0 |
121.5 |
C7 |
C8 |
H82 |
H83 |
240.0 |
238.5 |
H81 |
C8 |
H82 |
H83 |
120.0 |
117.1 |
H83 |
C8 |
C7 |
H71 |
182.3 |
298.8 |
H83 |
C8 |
C7 |
H72 |
304.5 |
181.9 |
C7 |
C8 |
H83 |
H81 |
240.0 |
237.9 |
C7 |
C8 |
H83 |
H82 |
120.0 |
121.0 |
H81 |
C8 |
H83 |
H82 |
240.0 |
243.1 |