PDB Chemical Component OBA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OBA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.395 |
1.381 |
C1 |
C6 |
1.377 |
1.386 |
C1 |
H1 |
1.102 |
1.080 |
C2 |
C3 |
1.403 |
1.389 |
C2 |
H2 |
1.102 |
1.080 |
C3 |
C4 |
1.382 |
1.403 |
C3 |
N13 |
1.352 |
1.390 |
C4 |
C5 |
1.403 |
1.396 |
C4 |
C10 |
1.469 |
1.474 |
C5 |
C6 |
1.377 |
1.378 |
C5 |
H5 |
1.104 |
1.079 |
C6 |
H6 |
1.103 |
1.080 |
C10 |
O11 |
1.320 |
1.215 |
C10 |
O12 |
1.179 |
1.347 |
O12 |
H12 |
0.950 |
0.968 |
N13 |
C14 |
1.346 |
1.347 |
N13 |
H13 |
1.020 |
0.970 |
C14 |
O15 |
1.270 |
1.214 |
C14 |
C16 |
1.585 |
1.492 |
C16 |
O17 |
1.171 |
1.212 |
C16 |
O18 |
1.401 |
1.345 |
O18 |
H18 |
0.951 |
0.966 |
Bond Angles for OBA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
120.2 |
120.4 |
C2 |
C1 |
H1 |
120.5 |
119.8 |
C1 |
C2 |
C3 |
120.7 |
120.1 |
C1 |
C2 |
H2 |
119.4 |
119.9 |
C6 |
C1 |
H1 |
119.3 |
119.8 |
C1 |
C6 |
C5 |
119.6 |
120.4 |
C1 |
C6 |
H6 |
120.3 |
119.8 |
C3 |
C2 |
H2 |
119.9 |
120.0 |
C2 |
C3 |
C4 |
118.2 |
119.6 |
C2 |
C3 |
N13 |
122.3 |
120.2 |
C4 |
C3 |
N13 |
119.4 |
120.2 |
C3 |
C4 |
C5 |
120.6 |
119.7 |
C3 |
C4 |
C10 |
120.2 |
120.2 |
C3 |
N13 |
C14 |
130.6 |
120.1 |
C3 |
N13 |
H13 |
114.9 |
120.0 |
C5 |
C4 |
C10 |
119.3 |
120.1 |
C4 |
C5 |
C6 |
120.5 |
119.9 |
C4 |
C5 |
H5 |
120.7 |
120.1 |
C4 |
C10 |
O11 |
109.5 |
120.0 |
C4 |
C10 |
O12 |
126.0 |
120.0 |
C6 |
C5 |
H5 |
118.8 |
120.0 |
C5 |
C6 |
H6 |
120.1 |
119.9 |
O11 |
C10 |
O12 |
124.2 |
120.0 |
C10 |
O12 |
H12 |
126.0 |
120.0 |
C14 |
N13 |
H13 |
114.5 |
120.0 |
N13 |
C14 |
O15 |
122.4 |
119.9 |
N13 |
C14 |
C16 |
109.8 |
120.1 |
O15 |
C14 |
C16 |
125.9 |
120.0 |
C14 |
C16 |
O17 |
131.3 |
120.0 |
C14 |
C16 |
O18 |
113.8 |
120.1 |
O17 |
C16 |
O18 |
114.3 |
120.0 |
C16 |
O18 |
H18 |
113.8 |
120.1 |
Torsion Angles for OBA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C5 |
2.2 |
0.0 |
C2 |
C1 |
C6 |
H6 |
182.2 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
354.7 |
0.2 |
C1 |
C2 |
C3 |
N13 |
177.2 |
180.0 |
C2 |
C1 |
C6 |
H1 |
180.0 |
180.0 |
C6 |
C1 |
C2 |
C3 |
2.1 |
0.0 |
C6 |
C1 |
C2 |
H2 |
182.1 |
180.0 |
C4 |
C5 |
C6 |
C1 |
356.8 |
359.7 |
C1 |
C6 |
C5 |
H5 |
176.8 |
179.9 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.0 |
H1 |
C1 |
C2 |
C3 |
182.1 |
180.0 |
H1 |
C1 |
C2 |
H2 |
2.1 |
0.0 |
H1 |
C1 |
C6 |
C5 |
182.1 |
180.0 |
H1 |
C1 |
C6 |
H6 |
2.2 |
360.0 |
C3 |
C2 |
C1 |
C6 |
2.1 |
0.0 |
C3 |
C2 |
C1 |
H1 |
182.1 |
180.0 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
N13 |
177.5 |
180.3 |
C2 |
C3 |
C4 |
C5 |
4.3 |
359.5 |
C2 |
C3 |
C4 |
C10 |
185.8 |
180.0 |
C2 |
C3 |
N13 |
C14 |
353.3 |
35.9 |
C2 |
C3 |
N13 |
H13 |
173.3 |
215.9 |
H2 |
C2 |
C1 |
C6 |
182.1 |
180.0 |
H2 |
C2 |
C1 |
H1 |
2.1 |
0.0 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
174.7 |
180.3 |
H2 |
C2 |
C3 |
N13 |
357.3 |
0.0 |
C4 |
C3 |
C2 |
H2 |
174.7 |
180.3 |
C2 |
C3 |
C4 |
N13 |
182.5 |
179.7 |
C4 |
C3 |
N13 |
C14 |
175.8 |
215.6 |
C4 |
C3 |
N13 |
H13 |
355.9 |
35.7 |
C5 |
C4 |
C3 |
C10 |
178.5 |
179.5 |
C3 |
C4 |
C5 |
C6 |
359.9 |
0.5 |
C3 |
C4 |
C5 |
H5 |
179.9 |
180.3 |
C3 |
C4 |
C10 |
O11 |
156.4 |
5.8 |
C3 |
C4 |
C10 |
O12 |
330.8 |
185.8 |
N13 |
C3 |
C2 |
H2 |
357.3 |
0.0 |
C2 |
C3 |
N13 |
C4 |
177.4 |
180.3 |
N13 |
C3 |
C4 |
C5 |
181.8 |
179.8 |
N13 |
C3 |
C4 |
C10 |
3.3 |
0.2 |
C14 |
N13 |
C3 |
H13 |
180.0 |
180.0 |
C3 |
N13 |
C14 |
O15 |
359.2 |
356.9 |
C3 |
N13 |
C14 |
C16 |
194.2 |
176.9 |
C1 |
C6 |
C5 |
C4 |
356.8 |
359.7 |
C5 |
C4 |
C3 |
N13 |
181.8 |
179.8 |
C3 |
C4 |
C5 |
C10 |
181.5 |
180.5 |
C5 |
C4 |
C10 |
O11 |
337.9 |
186.3 |
C5 |
C4 |
C10 |
O12 |
152.2 |
6.3 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.2 |
C4 |
C5 |
C6 |
H6 |
176.8 |
179.7 |
C10 |
C4 |
C3 |
N13 |
3.3 |
0.2 |
C3 |
C4 |
C10 |
C5 |
178.5 |
179.5 |
C10 |
C4 |
C5 |
C6 |
178.4 |
180.0 |
C10 |
C4 |
C5 |
H5 |
358.4 |
359.8 |
O11 |
C10 |
C4 |
O12 |
185.7 |
180.0 |
C4 |
C10 |
O12 |
H12 |
180.0 |
180.1 |
C5 |
C6 |
C1 |
H1 |
182.1 |
180.0 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
C10 |
178.4 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.8 |
H5 |
C5 |
C4 |
C10 |
358.4 |
359.8 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.2 |
H5 |
C5 |
C6 |
H6 |
356.8 |
359.9 |
H6 |
C6 |
C1 |
H1 |
2.2 |
360.0 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
356.8 |
359.9 |
C4 |
C10 |
O11 |
O12 |
174.5 |
180.0 |
O11 |
C10 |
O12 |
H12 |
353.6 |
0.1 |
C4 |
C10 |
O12 |
O11 |
186.5 |
180.0 |
C3 |
N13 |
C14 |
H13 |
180.0 |
180.0 |
O15 |
C14 |
N13 |
C16 |
165.0 |
180.0 |
N13 |
C14 |
C16 |
O17 |
218.1 |
360.0 |
N13 |
C14 |
C16 |
O18 |
47.4 |
180.0 |
C3 |
N13 |
H13 |
C14 |
180.0 |
180.0 |
H13 |
N13 |
C14 |
O15 |
179.1 |
176.9 |
H13 |
N13 |
C14 |
C16 |
14.1 |
356.9 |
O15 |
C14 |
N13 |
H13 |
179.1 |
176.9 |
N13 |
C14 |
O15 |
C16 |
197.5 |
180.0 |
O15 |
C14 |
C16 |
O17 |
53.7 |
180.0 |
O15 |
C14 |
C16 |
O18 |
243.1 |
360.0 |
C16 |
C14 |
N13 |
H13 |
14.1 |
356.9 |
N13 |
C14 |
C16 |
O15 |
164.4 |
180.0 |
O17 |
C16 |
C14 |
O18 |
170.6 |
180.0 |
C14 |
C16 |
O18 |
H18 |
180.0 |
180.0 |
C14 |
C16 |
O17 |
O18 |
189.4 |
180.0 |
O17 |
C16 |
O18 |
H18 |
7.7 |
0.0 |
C14 |
C16 |
O18 |
O17 |
172.3 |
180.0 |