PDB Chemical Component OAQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OAQ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O2 |
N2 |
1.306 |
1.218 |
O1 |
N2 |
1.301 |
1.218 |
N2 |
C3 |
1.442 |
1.480 |
C3 |
C4 |
1.437 |
1.380 |
C3 |
C2 |
1.459 |
1.383 |
C10 |
C2 |
1.510 |
1.507 |
C10 |
O3 |
1.363 |
1.429 |
C4 |
C5 |
1.487 |
1.390 |
C2 |
C1 |
1.417 |
1.381 |
C5 |
N1 |
1.474 |
1.399 |
C5 |
C6 |
1.398 |
1.386 |
C1 |
C6 |
1.479 |
1.384 |
N1 |
C7 |
1.440 |
1.469 |
C6 |
C9 |
1.548 |
1.506 |
C7 |
C8 |
1.473 |
1.533 |
C7 |
C11 |
1.526 |
1.530 |
C9 |
C8 |
1.482 |
1.528 |
C11 |
N3 |
1.446 |
1.468 |
N3 |
C14 |
1.460 |
1.469 |
C14 |
C13 |
1.524 |
1.530 |
C14 |
C12 |
1.483 |
1.531 |
C1 |
H1 |
1.080 |
1.080 |
C4 |
H2 |
1.080 |
1.080 |
C7 |
H3 |
1.100 |
1.090 |
C8 |
H4 |
1.100 |
1.090 |
C8 |
H5 |
1.100 |
1.090 |
C9 |
H6 |
1.100 |
1.090 |
C9 |
H7 |
1.100 |
1.091 |
C10 |
H8 |
1.100 |
1.091 |
C10 |
H9 |
1.100 |
1.090 |
C11 |
H10 |
1.100 |
1.090 |
C11 |
H11 |
1.100 |
1.090 |
C12 |
H12 |
1.100 |
1.090 |
C12 |
H13 |
1.100 |
1.089 |
C12 |
H14 |
1.100 |
1.090 |
C13 |
H15 |
1.100 |
1.090 |
C13 |
H16 |
1.100 |
1.089 |
C13 |
H17 |
1.100 |
1.089 |
C14 |
H18 |
1.100 |
1.090 |
N1 |
H19 |
0.999 |
0.970 |
N3 |
H20 |
1.000 |
1.009 |
O3 |
H22 |
0.950 |
0.967 |
Bond Angles for OAQ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C4 |
C5 |
119.9 |
120.1 |
C3 |
C4 |
H2 |
120.0 |
119.9 |
O3 |
C10 |
H8 |
109.9 |
109.5 |
O3 |
C10 |
H9 |
109.9 |
109.5 |
C10 |
O3 |
H22 |
109.5 |
114.0 |
C4 |
C5 |
N1 |
120.6 |
119.2 |
C4 |
C5 |
C6 |
119.6 |
120.0 |
C5 |
C4 |
H2 |
120.1 |
120.0 |
C2 |
C1 |
C6 |
120.0 |
120.3 |
C2 |
C1 |
H1 |
120.0 |
119.8 |
C6 |
C5 |
N1 |
119.8 |
120.8 |
C5 |
N1 |
C7 |
118.9 |
118.9 |
C5 |
N1 |
H19 |
107.1 |
120.6 |
C1 |
C6 |
C5 |
120.6 |
119.6 |
C5 |
C6 |
C9 |
121.9 |
121.5 |
C1 |
C6 |
C9 |
117.5 |
119.0 |
C6 |
C1 |
H1 |
120.0 |
119.9 |
N1 |
C7 |
H3 |
103.2 |
109.7 |
C6 |
C9 |
C8 |
113.6 |
110.5 |
C6 |
C9 |
H6 |
108.4 |
109.3 |
C6 |
C9 |
H7 |
108.4 |
109.3 |
C8 |
C7 |
C11 |
110.9 |
109.8 |
C8 |
C7 |
H3 |
102.8 |
109.8 |
C7 |
C8 |
H4 |
107.1 |
109.6 |
C7 |
C8 |
H5 |
107.1 |
109.6 |
C7 |
C11 |
N3 |
106.6 |
109.5 |
C11 |
C7 |
H3 |
102.4 |
109.8 |
C7 |
C11 |
H10 |
110.2 |
109.5 |
C7 |
C11 |
H11 |
110.2 |
109.5 |
C9 |
C8 |
H4 |
107.0 |
109.6 |
C9 |
C8 |
H5 |
107.1 |
109.7 |
C11 |
N3 |
C14 |
113.4 |
111.0 |
N3 |
C11 |
H10 |
110.2 |
109.5 |
N3 |
C11 |
H11 |
110.2 |
109.5 |
C11 |
N3 |
H20 |
108.5 |
111.0 |
N3 |
C14 |
H18 |
109.9 |
109.5 |
C14 |
C13 |
H15 |
109.5 |
109.4 |
C14 |
C13 |
H16 |
109.5 |
109.4 |
C14 |
C13 |
H17 |
109.5 |
109.5 |
C14 |
C12 |
H12 |
109.5 |
109.4 |
C14 |
C12 |
H13 |
109.5 |
109.5 |
C14 |
C12 |
H14 |
109.5 |
109.4 |
H4 |
C8 |
H5 |
109.5 |
109.5 |
H6 |
C9 |
H7 |
109.5 |
109.1 |
H8 |
C10 |
H9 |
109.5 |
109.4 |
H10 |
C11 |
H11 |
109.5 |
109.5 |
H12 |
C12 |
H13 |
109.4 |
109.5 |
H12 |
C12 |
H14 |
109.4 |
109.5 |
H13 |
C12 |
H14 |
109.5 |
109.5 |
H15 |
C13 |
H16 |
109.5 |
109.5 |
H15 |
C13 |
H17 |
109.5 |
109.5 |
H16 |
C13 |
H17 |
109.4 |
109.5 |
Torsion Angles for OAQ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N2 |
C3 |
C4 |
H2 |
0.8 |
359.9 |
C3 |
C4 |
C5 |
N1 |
180.1 |
179.7 |
C3 |
C4 |
C5 |
C6 |
0.1 |
359.9 |
C5 |
C4 |
C3 |
H2 |
180.0 |
180.1 |
C3 |
C2 |
C1 |
C6 |
359.9 |
0.1 |
C3 |
C2 |
C1 |
H1 |
179.9 |
179.8 |
C10 |
C2 |
C1 |
H1 |
359.8 |
359.7 |
H8 |
C10 |
O3 |
H9 |
120.6 |
120.0 |
C3 |
C4 |
C5 |
H2 |
180.0 |
179.9 |
C6 |
C5 |
C4 |
N1 |
180.0 |
180.2 |
C4 |
C5 |
N1 |
C7 |
165.6 |
166.5 |
C4 |
C5 |
N1 |
H19 |
286.9 |
346.5 |
C1 |
C6 |
C5 |
C4 |
0.0 |
0.2 |
C4 |
C5 |
C6 |
C9 |
180.3 |
180.7 |
C2 |
C1 |
C6 |
C5 |
359.9 |
359.8 |
C2 |
C1 |
C6 |
C9 |
179.7 |
179.3 |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
C4 |
C5 |
N1 |
C6 |
180.0 |
180.2 |
N1 |
C5 |
C4 |
H2 |
0.1 |
359.8 |
C1 |
C6 |
C5 |
N1 |
180.1 |
180.4 |
N1 |
C5 |
C6 |
C9 |
0.3 |
0.9 |
C5 |
N1 |
C7 |
H3 |
253.6 |
285.0 |
C4 |
C5 |
C6 |
N1 |
180.0 |
179.8 |
C6 |
C5 |
C4 |
H2 |
180.1 |
180.0 |
C6 |
C5 |
N1 |
C7 |
345.6 |
346.3 |
C6 |
C5 |
N1 |
H19 |
106.9 |
166.3 |
C1 |
C6 |
C5 |
C9 |
179.8 |
179.5 |
C5 |
C6 |
C1 |
H1 |
179.9 |
180.1 |
C5 |
C6 |
C9 |
C8 |
19.6 |
339.0 |
C5 |
C6 |
C9 |
H6 |
140.2 |
99.4 |
C5 |
C6 |
C9 |
H7 |
259.0 |
218.7 |
C4 |
C5 |
C6 |
C1 |
0.0 |
0.2 |
C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
C5 |
C6 |
C1 |
C9 |
180.2 |
180.5 |
C1 |
C6 |
C9 |
C8 |
199.8 |
159.5 |
C1 |
C6 |
C9 |
H6 |
320.4 |
279.9 |
C1 |
C6 |
C9 |
H7 |
79.2 |
39.2 |
C5 |
N1 |
C7 |
H19 |
121.3 |
180.0 |
C8 |
C7 |
N1 |
H3 |
114.1 |
119.6 |
N1 |
C7 |
C8 |
H4 |
134.8 |
56.7 |
N1 |
C7 |
C8 |
H5 |
252.1 |
177.0 |
N1 |
C7 |
C11 |
N3 |
120.6 |
56.5 |
C11 |
C7 |
N1 |
H3 |
250.0 |
239.3 |
N1 |
C7 |
C11 |
H10 |
240.2 |
176.5 |
N1 |
C7 |
C11 |
H11 |
1.1 |
296.5 |
C9 |
C6 |
C5 |
N1 |
0.3 |
0.9 |
C1 |
C6 |
C9 |
C5 |
180.2 |
180.5 |
C9 |
C6 |
C1 |
H1 |
359.7 |
359.6 |
C6 |
C9 |
C8 |
H4 |
212.8 |
291.5 |
C6 |
C9 |
C8 |
H5 |
95.5 |
171.3 |
H6 |
C9 |
C6 |
H7 |
241.2 |
240.7 |
C5 |
N1 |
C7 |
C8 |
7.6 |
44.6 |
N1 |
C7 |
C8 |
H3 |
245.8 |
240.5 |
C6 |
C9 |
C8 |
C7 |
334.2 |
51.4 |
C8 |
C7 |
C11 |
N3 |
261.1 |
175.0 |
C11 |
C7 |
C8 |
H3 |
108.8 |
120.7 |
C8 |
C7 |
C11 |
H10 |
20.6 |
295.0 |
C8 |
C7 |
C11 |
H11 |
141.5 |
55.0 |
C9 |
C8 |
C7 |
H4 |
238.7 |
240.2 |
C9 |
C8 |
C7 |
H5 |
121.4 |
120.0 |
H4 |
C8 |
C7 |
H5 |
242.7 |
239.8 |
C5 |
N1 |
C7 |
C11 |
143.6 |
164.3 |
N1 |
C7 |
C11 |
H3 |
110.5 |
120.7 |
C8 |
C7 |
C11 |
H3 |
250.9 |
239.2 |
C11 |
C7 |
C8 |
H4 |
357.8 |
297.0 |
C11 |
C7 |
C8 |
H5 |
115.1 |
57.2 |
C7 |
C11 |
N3 |
C14 |
132.0 |
180.0 |
N3 |
C11 |
C7 |
H10 |
240.4 |
240.0 |
N3 |
C11 |
C7 |
H11 |
119.6 |
120.0 |
C7 |
C11 |
N3 |
H20 |
252.6 |
304.0 |
H10 |
C11 |
C7 |
H11 |
239.1 |
240.0 |
C6 |
C9 |
C8 |
H6 |
120.6 |
120.3 |
C6 |
C9 |
C8 |
H7 |
239.4 |
239.7 |
C9 |
C8 |
C7 |
C11 |
236.5 |
177.2 |
C9 |
C8 |
C7 |
H3 |
127.7 |
56.5 |
C7 |
C8 |
C9 |
H4 |
121.4 |
119.8 |
C7 |
C8 |
C9 |
H5 |
238.6 |
240.1 |
H4 |
C8 |
C9 |
H5 |
117.3 |
120.3 |
N3 |
C11 |
C7 |
H3 |
10.2 |
295.8 |
C7 |
C11 |
N3 |
H10 |
119.6 |
120.0 |
C7 |
C11 |
N3 |
H11 |
240.5 |
240.0 |
C11 |
N3 |
C14 |
H18 |
40.9 |
35.0 |
H10 |
C11 |
N3 |
H11 |
120.9 |
120.0 |
C14 |
N3 |
C11 |
H10 |
12.5 |
60.0 |
C14 |
N3 |
C11 |
H11 |
251.6 |
300.0 |
C11 |
N3 |
C14 |
H20 |
120.6 |
124.0 |
N3 |
C14 |
C13 |
H15 |
180.0 |
60.0 |
N3 |
C14 |
C13 |
H16 |
300.0 |
180.0 |
N3 |
C14 |
C13 |
H17 |
60.0 |
300.0 |
N3 |
C14 |
C12 |
H12 |
180.0 |
180.0 |
N3 |
C14 |
C12 |
H13 |
300.0 |
300.0 |
N3 |
C14 |
C12 |
H14 |
60.0 |
60.0 |
C11 |
N3 |
C14 |
C13 |
160.4 |
275.0 |
C13 |
C14 |
C12 |
H12 |
299.5 |
60.0 |
C13 |
C14 |
C12 |
H13 |
59.5 |
180.0 |
C13 |
C14 |
C12 |
H14 |
179.6 |
300.0 |
H15 |
C13 |
C14 |
H16 |
240.0 |
240.0 |
H15 |
C13 |
C14 |
H17 |
120.0 |
120.0 |
H16 |
C13 |
C14 |
H17 |
240.0 |
240.0 |
C11 |
N3 |
C14 |
C12 |
280.4 |
155.0 |
H12 |
C12 |
C14 |
H13 |
240.0 |
240.0 |
H12 |
C12 |
C14 |
H14 |
120.0 |
120.0 |
H13 |
C12 |
C14 |
H14 |
240.0 |
240.0 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.3 |
H1 |
C1 |
C6 |
C5 |
179.9 |
180.1 |
H1 |
C1 |
C6 |
C9 |
359.7 |
359.6 |
C3 |
C4 |
H2 |
C5 |
180.0 |
180.1 |
H2 |
C4 |
C5 |
N1 |
0.1 |
359.8 |
H2 |
C4 |
C5 |
C6 |
180.1 |
180.0 |
C8 |
C7 |
H3 |
C11 |
115.2 |
120.8 |
H3 |
C7 |
C8 |
H4 |
249.0 |
176.3 |
H3 |
C7 |
C8 |
H5 |
6.3 |
296.5 |
H3 |
C7 |
C11 |
N3 |
10.2 |
295.8 |
H3 |
C7 |
C11 |
H10 |
129.7 |
55.8 |
H3 |
C7 |
C11 |
H11 |
250.6 |
175.8 |
H4 |
C8 |
C7 |
C11 |
357.8 |
297.0 |
H4 |
C8 |
C7 |
H3 |
249.0 |
176.3 |
C7 |
C8 |
H4 |
H5 |
115.7 |
120.3 |
C9 |
C8 |
H4 |
H5 |
244.3 |
239.6 |
H5 |
C8 |
C7 |
C11 |
115.1 |
57.2 |
H5 |
C8 |
C7 |
H3 |
6.3 |
296.5 |
C7 |
C8 |
H5 |
H4 |
244.3 |
239.7 |
C9 |
C8 |
H5 |
H4 |
115.7 |
120.3 |
C6 |
C9 |
H6 |
C8 |
236.2 |
238.9 |
C6 |
C9 |
H6 |
H7 |
118.1 |
119.4 |
H6 |
C9 |
C8 |
H4 |
92.2 |
171.2 |
H6 |
C9 |
C8 |
H5 |
334.9 |
50.9 |
C6 |
C9 |
H7 |
C8 |
123.8 |
121.1 |
C6 |
C9 |
H7 |
H6 |
241.9 |
240.6 |
H7 |
C9 |
C8 |
H4 |
333.4 |
51.8 |
H7 |
C9 |
C8 |
H5 |
216.1 |
291.6 |
O3 |
C10 |
H8 |
H9 |
239.1 |
240.0 |
H8 |
C10 |
O3 |
H22 |
60.3 |
60.0 |
O3 |
C10 |
H9 |
H8 |
120.9 |
120.0 |
H9 |
C10 |
O3 |
H22 |
299.7 |
300.0 |
C7 |
C11 |
H10 |
N3 |
242.6 |
240.0 |
H10 |
C11 |
C7 |
H3 |
129.7 |
55.8 |
C7 |
C11 |
H10 |
H11 |
121.3 |
120.0 |
H10 |
C11 |
N3 |
C14 |
12.5 |
60.0 |
N3 |
C11 |
H10 |
H11 |
238.7 |
240.0 |
H10 |
C11 |
N3 |
H20 |
133.0 |
183.9 |
C7 |
C11 |
H11 |
N3 |
117.3 |
120.0 |
H11 |
C11 |
C7 |
H3 |
250.6 |
175.8 |
C7 |
C11 |
H11 |
H10 |
238.7 |
240.0 |
H11 |
C11 |
N3 |
C14 |
251.6 |
300.0 |
N3 |
C11 |
H11 |
H10 |
121.3 |
120.0 |
H11 |
C11 |
N3 |
H20 |
12.1 |
64.0 |
C14 |
C12 |
H12 |
H13 |
120.0 |
120.0 |
C14 |
C12 |
H12 |
H14 |
240.0 |
240.1 |
H13 |
C12 |
H12 |
H14 |
120.0 |
120.1 |
C14 |
C12 |
H13 |
H12 |
240.0 |
240.0 |
C14 |
C12 |
H13 |
H14 |
120.0 |
119.9 |
H12 |
C12 |
H13 |
H14 |
240.0 |
239.9 |
C14 |
C12 |
H14 |
H12 |
120.0 |
119.9 |
C14 |
C12 |
H14 |
H13 |
240.0 |
240.0 |
H12 |
C12 |
H14 |
H13 |
120.0 |
120.1 |
C14 |
C13 |
H15 |
H16 |
120.0 |
120.0 |
C14 |
C13 |
H15 |
H17 |
240.0 |
240.0 |
H16 |
C13 |
H15 |
H17 |
120.0 |
120.1 |
C14 |
C13 |
H16 |
H15 |
240.0 |
240.0 |
C14 |
C13 |
H16 |
H17 |
120.0 |
120.0 |
H15 |
C13 |
H16 |
H17 |
240.0 |
239.9 |
C14 |
C13 |
H17 |
H15 |
120.0 |
120.0 |
C14 |
C13 |
H17 |
H16 |
240.0 |
240.0 |
H15 |
C13 |
H17 |
H16 |
120.0 |
120.1 |
H18 |
C14 |
C13 |
H15 |
300.0 |
300.0 |
H18 |
C14 |
C13 |
H16 |
60.0 |
60.0 |
H18 |
C14 |
C13 |
H17 |
180.0 |
180.0 |
H18 |
C14 |
C12 |
H12 |
59.2 |
300.0 |
H18 |
C14 |
C12 |
H13 |
179.2 |
60.0 |
H18 |
C14 |
C12 |
H14 |
299.3 |
180.0 |
C5 |
N1 |
H19 |
C7 |
231.5 |
180.0 |
H19 |
N1 |
C7 |
H3 |
132.2 |
105.0 |
C11 |
N3 |
H20 |
C14 |
236.4 |
236.0 |
H20 |
N3 |
C11 |
H10 |
133.0 |
183.9 |
H20 |
N3 |
C11 |
H11 |
12.1 |
64.0 |
H20 |
N3 |
C14 |
H18 |
280.4 |
271.0 |
H22 |
O3 |
C10 |
H8 |
60.3 |
60.0 |
H22 |
O3 |
C10 |
H9 |
299.7 |
300.0 |