PDB Chemical Component OA2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OA2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O2 |
C1 |
1.235 |
1.217 |
C1 |
C3 |
1.510 |
1.462 |
C1 |
N13 |
1.349 |
1.347 |
C3 |
O4 |
1.367 |
1.356 |
C3 |
C5 |
1.404 |
1.365 |
O4 |
C6 |
1.354 |
1.340 |
C6 |
N8 |
1.354 |
1.373 |
C6 |
N7 |
1.343 |
1.317 |
N7 |
C5 |
1.361 |
1.335 |
N13 |
C10 |
1.466 |
1.466 |
N13 |
C16 |
1.456 |
1.465 |
C10 |
C9 |
1.518 |
1.508 |
C9 |
C11 |
1.402 |
1.382 |
C9 |
C12 |
1.390 |
1.383 |
C11 |
C14 |
1.393 |
1.383 |
C14 |
C17 |
1.390 |
1.383 |
C17 |
C15 |
1.394 |
1.382 |
C15 |
C12 |
1.403 |
1.382 |
C16 |
C18 |
1.509 |
1.507 |
C18 |
C19 |
1.390 |
1.383 |
C18 |
C20 |
1.388 |
1.383 |
C19 |
C21 |
1.388 |
1.383 |
C21 |
C23 |
1.393 |
1.382 |
C23 |
C22 |
1.385 |
1.382 |
C22 |
C20 |
1.391 |
1.382 |
C5 |
H5 |
1.080 |
1.080 |
N8 |
H81N |
1.000 |
0.970 |
N8 |
H82N |
1.000 |
0.970 |
C10 |
H101 |
1.101 |
1.090 |
C10 |
H102 |
1.100 |
1.089 |
C16 |
H161 |
1.100 |
1.089 |
C16 |
H162 |
1.100 |
1.090 |
C11 |
H11 |
1.080 |
1.079 |
C12 |
H12 |
1.080 |
1.080 |
C14 |
H14 |
1.080 |
1.080 |
C17 |
H17 |
1.080 |
1.080 |
C15 |
H15 |
1.080 |
1.080 |
C19 |
H19 |
1.080 |
1.080 |
C20 |
H20 |
1.080 |
1.079 |
C21 |
H21 |
1.080 |
1.080 |
C23 |
H23 |
1.080 |
1.080 |
C22 |
H22 |
1.080 |
1.081 |
Bond Angles for OA2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
C1 |
C3 |
115.2 |
120.0 |
O2 |
C1 |
N13 |
119.5 |
120.1 |
C3 |
C1 |
N13 |
125.3 |
120.0 |
C1 |
C3 |
O4 |
110.8 |
126.6 |
C1 |
C3 |
C5 |
139.1 |
126.6 |
C1 |
N13 |
C10 |
121.8 |
120.0 |
C1 |
N13 |
C16 |
125.7 |
120.1 |
O4 |
C3 |
C5 |
110.1 |
106.9 |
C3 |
O4 |
C6 |
102.4 |
107.6 |
C3 |
C5 |
N7 |
107.3 |
107.6 |
C3 |
C5 |
H5 |
126.3 |
126.2 |
O4 |
C6 |
N8 |
120.8 |
125.5 |
O4 |
C6 |
N7 |
115.4 |
108.9 |
N8 |
C6 |
N7 |
123.9 |
125.5 |
C6 |
N8 |
H81N |
109.5 |
119.9 |
C6 |
N8 |
H82N |
109.4 |
120.0 |
C6 |
N7 |
C5 |
104.8 |
108.9 |
N7 |
C5 |
H5 |
126.4 |
126.2 |
C10 |
N13 |
C16 |
112.5 |
120.0 |
N13 |
C10 |
C9 |
110.3 |
109.5 |
N13 |
C10 |
H101 |
109.2 |
109.5 |
N13 |
C10 |
H102 |
109.0 |
109.5 |
N13 |
C16 |
C18 |
111.4 |
109.5 |
N13 |
C16 |
H161 |
108.8 |
109.5 |
N13 |
C16 |
H162 |
108.4 |
109.4 |
C10 |
C9 |
C11 |
120.1 |
120.0 |
C10 |
C9 |
C12 |
119.9 |
120.0 |
C9 |
C10 |
H101 |
109.2 |
109.4 |
C9 |
C10 |
H102 |
109.0 |
109.5 |
C11 |
C9 |
C12 |
120.0 |
120.0 |
C9 |
C11 |
C14 |
120.1 |
120.0 |
C9 |
C11 |
H11 |
120.0 |
120.0 |
C9 |
C12 |
C15 |
119.7 |
120.0 |
C9 |
C12 |
H12 |
120.1 |
120.0 |
C11 |
C14 |
C17 |
120.0 |
120.0 |
C14 |
C11 |
H11 |
119.9 |
120.0 |
C11 |
C14 |
H14 |
120.0 |
120.0 |
C14 |
C17 |
C15 |
120.1 |
120.0 |
C17 |
C14 |
H14 |
120.0 |
120.0 |
C14 |
C17 |
H17 |
120.0 |
119.9 |
C17 |
C15 |
C12 |
120.1 |
120.0 |
C15 |
C17 |
H17 |
119.9 |
120.1 |
C17 |
C15 |
H15 |
120.0 |
120.0 |
C15 |
C12 |
H12 |
120.2 |
120.0 |
C12 |
C15 |
H15 |
119.9 |
120.0 |
C16 |
C18 |
C19 |
121.9 |
120.0 |
C16 |
C18 |
C20 |
118.2 |
120.0 |
C18 |
C16 |
H161 |
108.8 |
109.5 |
C18 |
C16 |
H162 |
108.4 |
109.5 |
C19 |
C18 |
C20 |
119.9 |
120.0 |
C18 |
C19 |
C21 |
120.0 |
119.9 |
C18 |
C19 |
H19 |
120.0 |
120.0 |
C18 |
C20 |
C22 |
120.2 |
120.0 |
C18 |
C20 |
H20 |
119.9 |
120.0 |
C19 |
C21 |
C23 |
120.1 |
120.0 |
C21 |
C19 |
H19 |
120.0 |
120.0 |
C19 |
C21 |
H21 |
120.0 |
120.0 |
C21 |
C23 |
C22 |
119.9 |
120.0 |
C23 |
C21 |
H21 |
119.9 |
120.0 |
C21 |
C23 |
H23 |
120.1 |
120.0 |
C23 |
C22 |
C20 |
120.0 |
120.1 |
C22 |
C23 |
H23 |
120.1 |
120.0 |
C23 |
C22 |
H22 |
120.0 |
120.0 |
C22 |
C20 |
H20 |
119.9 |
120.1 |
C20 |
C22 |
H22 |
120.0 |
120.0 |
H81N |
N8 |
H82N |
109.5 |
120.1 |
H101 |
C10 |
H102 |
110.1 |
109.5 |
H161 |
C16 |
H162 |
111.1 |
109.5 |
Torsion Angles for OA2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C1 |
O2 |
N13 |
180.8 |
180.3 |
O2 |
C1 |
C3 |
O4 |
357.1 |
182.3 |
O2 |
C1 |
C3 |
C5 |
175.7 |
2.1 |
O2 |
C1 |
N13 |
C10 |
8.4 |
4.8 |
O2 |
C1 |
N13 |
C16 |
188.4 |
184.8 |
O2 |
C1 |
C3 |
N13 |
179.1 |
179.7 |
C3 |
C1 |
N13 |
C10 |
187.5 |
184.5 |
C3 |
C1 |
N13 |
C16 |
7.5 |
4.6 |
O4 |
C3 |
C1 |
C5 |
181.4 |
180.2 |
C1 |
C3 |
O4 |
C6 |
179.6 |
180.0 |
C1 |
C3 |
C5 |
N7 |
181.2 |
179.8 |
C1 |
C3 |
C5 |
H5 |
1.2 |
359.9 |
O2 |
C1 |
N13 |
C3 |
180.9 |
180.3 |
N13 |
C1 |
C3 |
O4 |
178.0 |
2.6 |
N13 |
C1 |
C3 |
C5 |
356.5 |
182.3 |
C10 |
N13 |
C1 |
C16 |
180.0 |
180.0 |
C1 |
N13 |
C10 |
C9 |
243.1 |
95.4 |
C1 |
N13 |
C10 |
H101 |
3.1 |
215.3 |
C1 |
N13 |
C10 |
H102 |
123.4 |
335.4 |
C1 |
N13 |
C16 |
C18 |
255.3 |
89.0 |
C1 |
N13 |
C16 |
H161 |
15.3 |
209.1 |
C1 |
N13 |
C16 |
H162 |
136.2 |
329.1 |
O4 |
C3 |
C1 |
N13 |
178.0 |
2.6 |
C1 |
C3 |
O4 |
C5 |
179.0 |
179.8 |
O4 |
C3 |
C5 |
N7 |
359.8 |
359.6 |
O4 |
C3 |
C5 |
H5 |
179.8 |
179.7 |
C3 |
O4 |
C6 |
N8 |
180.2 |
180.0 |
C3 |
O4 |
C6 |
N7 |
359.1 |
0.1 |
C5 |
C3 |
C1 |
N13 |
356.5 |
182.3 |
C1 |
C3 |
C5 |
O4 |
181.4 |
180.2 |
C5 |
C3 |
O4 |
C6 |
0.6 |
0.2 |
C6 |
N7 |
C5 |
C3 |
359.7 |
0.4 |
N7 |
C5 |
C3 |
H5 |
180.0 |
179.9 |
C6 |
O4 |
C3 |
C5 |
0.6 |
0.2 |
N8 |
C6 |
O4 |
N7 |
181.1 |
179.9 |
O4 |
C6 |
N8 |
H81N |
297.8 |
0.1 |
O4 |
C6 |
N8 |
H82N |
57.7 |
180.0 |
O4 |
C6 |
N7 |
C5 |
0.8 |
359.7 |
O4 |
C6 |
N8 |
N7 |
178.8 |
180.1 |
N8 |
C6 |
N7 |
C5 |
179.7 |
179.8 |
H81N |
N8 |
C6 |
H82N |
240.0 |
180.2 |
C3 |
C5 |
N7 |
C6 |
359.7 |
0.4 |
O4 |
C6 |
N7 |
N8 |
181.1 |
179.9 |
N7 |
C6 |
N8 |
H81N |
118.9 |
180.0 |
N7 |
C6 |
N8 |
H82N |
238.9 |
359.9 |
C6 |
N7 |
C5 |
H5 |
179.7 |
180.3 |
C3 |
C5 |
N7 |
H5 |
180.0 |
180.1 |
C1 |
N13 |
C10 |
C16 |
180.0 |
180.0 |
C10 |
N13 |
C16 |
C18 |
75.4 |
269.1 |
C10 |
N13 |
C16 |
H161 |
195.3 |
29.1 |
C10 |
N13 |
C16 |
H162 |
316.2 |
149.1 |
N13 |
C10 |
C9 |
C11 |
237.8 |
96.1 |
N13 |
C10 |
C9 |
C12 |
57.0 |
275.9 |
C9 |
C10 |
N13 |
H101 |
240.0 |
240.1 |
C9 |
C10 |
N13 |
H102 |
119.6 |
120.0 |
H101 |
C10 |
N13 |
H102 |
239.6 |
239.9 |
C1 |
N13 |
C16 |
C10 |
180.0 |
180.0 |
C16 |
N13 |
C10 |
C9 |
63.1 |
275.3 |
C16 |
N13 |
C10 |
H101 |
183.1 |
35.3 |
C16 |
N13 |
C10 |
H102 |
303.4 |
155.3 |
N13 |
C16 |
C18 |
C19 |
24.4 |
83.9 |
N13 |
C16 |
C18 |
C20 |
205.0 |
263.7 |
C18 |
C16 |
N13 |
H161 |
240.0 |
240.0 |
C18 |
C16 |
N13 |
H162 |
119.2 |
120.0 |
H161 |
C16 |
N13 |
H162 |
239.1 |
240.0 |
C9 |
C10 |
N13 |
C16 |
63.1 |
275.3 |
N13 |
C10 |
C9 |
H101 |
120.0 |
120.0 |
N13 |
C10 |
C9 |
H102 |
240.4 |
240.0 |
C11 |
C9 |
C10 |
C12 |
180.8 |
180.2 |
C10 |
C9 |
C11 |
C14 |
179.8 |
180.0 |
C10 |
C9 |
C11 |
H11 |
359.8 |
0.0 |
C10 |
C9 |
C12 |
C15 |
179.8 |
179.8 |
C10 |
C9 |
C12 |
H12 |
359.8 |
0.0 |
H101 |
C10 |
C9 |
H102 |
120.4 |
120.0 |
C10 |
C9 |
C11 |
C12 |
179.2 |
179.8 |
C11 |
C9 |
C10 |
H101 |
117.8 |
336.2 |
C11 |
C9 |
C10 |
H102 |
357.4 |
216.1 |
C11 |
C9 |
C12 |
C15 |
359.0 |
359.6 |
C11 |
C9 |
C12 |
H12 |
179.0 |
179.8 |
C9 |
C11 |
C14 |
C17 |
0.2 |
0.0 |
C14 |
C11 |
C9 |
H11 |
180.0 |
180.0 |
C9 |
C11 |
C14 |
H14 |
180.2 |
180.0 |
C10 |
C9 |
C12 |
C11 |
180.8 |
180.2 |
C12 |
C9 |
C10 |
H101 |
297.0 |
155.9 |
C12 |
C9 |
C10 |
H102 |
176.6 |
35.9 |
C12 |
C9 |
C11 |
C14 |
0.6 |
0.2 |
C12 |
C9 |
C11 |
H11 |
180.6 |
180.2 |
C17 |
C15 |
C12 |
C9 |
0.6 |
0.4 |
C15 |
C12 |
C9 |
H12 |
180.0 |
179.8 |
C9 |
C12 |
C15 |
H15 |
180.6 |
180.3 |
C14 |
C11 |
C9 |
C12 |
0.6 |
0.2 |
C9 |
C11 |
C14 |
H11 |
180.0 |
180.0 |
C11 |
C14 |
C17 |
C15 |
359.4 |
359.9 |
C17 |
C14 |
C11 |
H14 |
180.0 |
180.1 |
C11 |
C14 |
C17 |
H17 |
179.3 |
179.9 |
C17 |
C14 |
C11 |
H11 |
180.2 |
180.0 |
C11 |
C14 |
C17 |
H14 |
180.0 |
179.9 |
C14 |
C17 |
C15 |
C12 |
0.2 |
359.8 |
C15 |
C17 |
C14 |
H17 |
180.0 |
180.0 |
C14 |
C17 |
C15 |
H15 |
180.3 |
180.0 |
C9 |
C12 |
C15 |
C17 |
0.6 |
0.4 |
C15 |
C17 |
C14 |
H14 |
179.4 |
180.0 |
C14 |
C17 |
C15 |
H17 |
180.0 |
180.0 |
C17 |
C15 |
C12 |
H12 |
180.6 |
180.2 |
C12 |
C15 |
C17 |
H15 |
180.0 |
179.9 |
C9 |
C12 |
C15 |
H12 |
180.0 |
180.2 |
C12 |
C15 |
C17 |
H17 |
180.3 |
179.8 |
C17 |
C15 |
C12 |
H15 |
180.0 |
180.1 |
N13 |
C16 |
C18 |
H161 |
120.0 |
120.0 |
N13 |
C16 |
C18 |
H162 |
240.8 |
240.0 |
C19 |
C18 |
C16 |
C20 |
179.5 |
180.3 |
C16 |
C18 |
C19 |
C21 |
180.2 |
180.0 |
C16 |
C18 |
C19 |
H19 |
0.2 |
360.0 |
C16 |
C18 |
C20 |
C22 |
180.1 |
179.8 |
C16 |
C18 |
C20 |
H20 |
0.1 |
0.0 |
H161 |
C16 |
C18 |
H162 |
120.9 |
120.0 |
C16 |
C18 |
C19 |
C20 |
180.5 |
179.7 |
C19 |
C18 |
C16 |
H161 |
264.5 |
323.9 |
C19 |
C18 |
C16 |
H162 |
143.6 |
203.9 |
C19 |
C18 |
C20 |
C22 |
0.6 |
359.5 |
C19 |
C18 |
C20 |
H20 |
180.6 |
179.7 |
C18 |
C19 |
C21 |
C23 |
359.6 |
360.0 |
C21 |
C19 |
C18 |
H19 |
180.0 |
180.1 |
C18 |
C19 |
C21 |
H21 |
179.7 |
180.0 |
C16 |
C18 |
C20 |
C19 |
179.5 |
180.3 |
C20 |
C18 |
C16 |
H161 |
85.0 |
143.7 |
C20 |
C18 |
C16 |
H162 |
324.1 |
23.6 |
C20 |
C18 |
C19 |
C21 |
359.7 |
0.3 |
C20 |
C18 |
C19 |
H19 |
179.7 |
180.2 |
C23 |
C22 |
C20 |
C18 |
359.8 |
0.4 |
C22 |
C20 |
C18 |
H20 |
180.0 |
179.8 |
C18 |
C20 |
C22 |
H22 |
179.8 |
180.2 |
C21 |
C19 |
C18 |
C20 |
359.7 |
0.3 |
C18 |
C19 |
C21 |
H19 |
180.0 |
179.9 |
C19 |
C21 |
C23 |
C22 |
0.7 |
-0.0 |
C23 |
C21 |
C19 |
H21 |
180.0 |
180.0 |
C19 |
C21 |
C23 |
H23 |
180.7 |
180.0 |
C23 |
C21 |
C19 |
H19 |
179.6 |
180.0 |
C19 |
C21 |
C23 |
H21 |
180.0 |
180.0 |
C21 |
C23 |
C22 |
C20 |
359.5 |
359.8 |
C22 |
C23 |
C21 |
H23 |
180.0 |
180.0 |
C21 |
C23 |
C22 |
H22 |
179.5 |
180.0 |
C18 |
C20 |
C22 |
C23 |
359.8 |
0.4 |
C22 |
C23 |
C21 |
H21 |
180.7 |
180.0 |
C21 |
C23 |
C22 |
H23 |
180.0 |
180.0 |
C23 |
C22 |
C20 |
H20 |
179.8 |
180.2 |
C20 |
C22 |
C23 |
H22 |
180.0 |
179.8 |
C18 |
C20 |
C22 |
H20 |
180.0 |
180.2 |
C20 |
C22 |
C23 |
H23 |
179.5 |
179.8 |
C23 |
C22 |
C20 |
H22 |
180.0 |
180.2 |
C3 |
C5 |
H5 |
N7 |
180.0 |
179.9 |
H81N |
N8 |
C6 |
N7 |
118.9 |
180.0 |
C6 |
N8 |
H81N |
H82N |
120.0 |
179.8 |
H82N |
N8 |
C6 |
N7 |
238.9 |
359.9 |
C6 |
N8 |
H82N |
H81N |
240.0 |
180.2 |
H101 |
C10 |
N13 |
C16 |
183.1 |
35.3 |
N13 |
C10 |
H101 |
C9 |
239.3 |
240.0 |
N13 |
C10 |
H101 |
H102 |
119.7 |
120.1 |
H101 |
C10 |
C9 |
C11 |
117.8 |
336.2 |
H101 |
C10 |
C9 |
C12 |
297.0 |
155.9 |
C9 |
C10 |
H101 |
H102 |
240.3 |
240.0 |
H102 |
C10 |
N13 |
C16 |
303.4 |
155.3 |
N13 |
C10 |
H102 |
C9 |
120.4 |
120.0 |
N13 |
C10 |
H102 |
H101 |
240.2 |
240.0 |
H102 |
C10 |
C9 |
C11 |
357.4 |
216.1 |
H102 |
C10 |
C9 |
C12 |
176.6 |
35.9 |
C9 |
C10 |
H102 |
H101 |
119.8 |
120.0 |
N13 |
C16 |
H161 |
C18 |
238.4 |
240.0 |
N13 |
C16 |
H161 |
H162 |
119.2 |
119.9 |
H161 |
C16 |
C18 |
C19 |
264.5 |
323.9 |
H161 |
C16 |
C18 |
C20 |
85.0 |
143.7 |
C18 |
C16 |
H161 |
H162 |
240.8 |
240.0 |
N13 |
C16 |
H162 |
C18 |
121.1 |
120.0 |
N13 |
C16 |
H162 |
H161 |
240.5 |
240.0 |
H162 |
C16 |
C18 |
C19 |
143.6 |
203.9 |
H162 |
C16 |
C18 |
C20 |
324.1 |
23.6 |
C18 |
C16 |
H162 |
H161 |
119.5 |
120.1 |
H11 |
C11 |
C9 |
C12 |
180.6 |
180.2 |
C9 |
C11 |
H11 |
C14 |
180.0 |
180.0 |
H11 |
C11 |
C14 |
C17 |
180.2 |
180.0 |
H11 |
C11 |
C14 |
H14 |
0.2 |
359.9 |
C9 |
C12 |
H12 |
C15 |
180.0 |
179.8 |
H12 |
C12 |
C15 |
H15 |
0.6 |
0.0 |
C11 |
C14 |
H14 |
C17 |
180.0 |
180.1 |
H14 |
C14 |
C11 |
H11 |
0.2 |
359.9 |
H14 |
C14 |
C17 |
C15 |
179.4 |
180.0 |
H14 |
C14 |
C17 |
H17 |
359.3 |
360.0 |
C14 |
C17 |
H17 |
C15 |
180.0 |
180.0 |
H17 |
C17 |
C14 |
H14 |
359.3 |
360.0 |
H17 |
C17 |
C15 |
C12 |
180.3 |
179.8 |
H17 |
C17 |
C15 |
H15 |
0.3 |
360.0 |
C17 |
C15 |
H15 |
C12 |
180.0 |
179.9 |
H15 |
C15 |
C17 |
H17 |
0.3 |
360.0 |
H15 |
C15 |
C12 |
H12 |
0.6 |
0.0 |
H19 |
C19 |
C18 |
C20 |
179.7 |
180.2 |
C18 |
C19 |
H19 |
C21 |
180.0 |
180.1 |
H19 |
C19 |
C21 |
C23 |
179.6 |
180.0 |
H19 |
C19 |
C21 |
H21 |
359.6 |
0.0 |
C18 |
C20 |
H20 |
C22 |
180.0 |
179.8 |
H20 |
C20 |
C22 |
H22 |
359.8 |
360.0 |
C19 |
C21 |
H21 |
C23 |
180.0 |
180.0 |
H21 |
C21 |
C19 |
H19 |
359.6 |
0.0 |
H21 |
C21 |
C23 |
C22 |
180.7 |
180.0 |
H21 |
C21 |
C23 |
H23 |
0.7 |
360.0 |
C21 |
C23 |
H23 |
C22 |
180.0 |
180.0 |
H23 |
C23 |
C21 |
H21 |
0.7 |
360.0 |
H23 |
C23 |
C22 |
C20 |
179.5 |
179.8 |
H23 |
C23 |
C22 |
H22 |
359.5 |
0.0 |
C23 |
C22 |
H22 |
C20 |
180.0 |
179.8 |
H22 |
C22 |
C23 |
H23 |
359.5 |
0.0 |
H22 |
C22 |
C20 |
H20 |
359.8 |
360.0 |