PDB Chemical Component O6V

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for O6V

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C29	C28	1.409	1.381
C29	C24	1.399	1.394
C22	S21	1.757	1.752
C22	C23	1.373	1.334
S21	C20	1.769	1.758
C28	C27	1.403	1.383
C23	C24	1.477	1.483
C23	C30	1.462	1.456
C24	C25	1.413	1.394
C20	C30	1.386	1.390
C20	N19	1.401	1.351
C30	C31	1.423	1.427
C27	C26	1.396	1.383
N19	C18	1.348	1.300
C01	C02	1.544	1.530
C31	O32	1.275	1.219
C31	N33	1.405	1.348
C18	N33	1.375	1.357
C18	C02	1.582	1.507
C25	C26	1.402	1.380
C02	O03	1.474	1.452
O03	C04	1.397	1.342
O17	C16	1.242	1.213
C04	O05	1.254	1.209
C04	C06	1.561	1.507
N15	C16	1.464	1.329
N15	C14	1.475	1.392
C16	C07	1.519	1.507
C13	C14	1.441	1.390
C13	C12	1.411	1.381
C14	C09	1.398	1.396
C06	C07	1.596	1.529
C07	S08	1.870	1.818
C12	C11	1.411	1.383
C09	S08	1.779	1.765
C09	C10	1.422	1.385
C11	C10	1.406	1.383
C01	H1	1.100	1.089
C01	H2	1.100	1.091
C01	H3	1.100	1.090
C02	H4	1.100	1.091
C06	H5	1.100	1.090
C06	H6	1.100	1.090
C07	H7	1.100	1.090
C10	H8	1.080	1.080
C11	H9	1.080	1.079
C12	H10	1.080	1.080
C13	H11	1.080	1.079
C22	H12	1.080	1.080
C25	H13	1.080	1.080
C26	H14	1.080	1.080
C27	H15	1.080	1.080
C28	H16	1.080	1.080
C29	H17	1.080	1.080
N15	H18	1.000	0.970
N33	H19	1.000	0.970

Bond Angles for O6V

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C29	C28	H16	120.0	120.0
C23	C22	S21	111.0	111.2
S21	C22	H12	124.5	124.5
C22	C23	C24	126.0	122.8
C22	C23	C30	110.7	114.4
C23	C22	H12	124.5	124.3
C28	C27	H15	119.6	119.9
C24	C23	C30	123.3	122.8
C23	C24	C25	119.6	120.1
C20	C30	C23	117.6	112.2
C23	C30	C31	127.0	130.0
C24	C25	C26	120.6	119.9
C24	C25	H13	119.7	120.1
C30	C20	N19	125.8	119.5
C20	C30	C31	115.4	117.8
C30	C31	O32	127.0	120.6
C30	C31	N33	118.8	118.8
C27	C26	H14	120.4	119.9
N19	C18	N33	121.3	121.9
C01	C02	O03	111.3	109.5
C02	C01	H1	109.5	109.4
C02	C01	H2	109.5	109.4
C02	C01	H3	109.5	109.5
C01	C02	H4	107.6	109.5
N33	C31	O32	114.3	120.6
C18	N33	C31	122.0	120.3
C31	N33	H19	119.0	119.8
C18	N33	H19	119.0	119.9
C18	C02	O03	112.7	109.5
C18	C02	H4	107.2	109.4
C26	C25	H13	119.7	120.0
C25	C26	H14	120.4	120.0
C02	O03	C04	124.5	117.0
O03	C02	H4	108.5	109.5
O03	C04	O05	116.2	120.0
C06	C04	O05	118.4	119.9
C04	C06	C07	119.1	109.5
C04	C06	H5	107.0	109.4
C04	C06	H6	107.0	109.5
C16	C07	S08	110.6	108.6
C16	C07	H7	109.7	109.8
C14	C13	H11	118.7	119.8
C13	C12	H10	119.6	119.8
C14	C09	S08	119.4	119.6
C06	C07	S08	113.0	109.6
C07	C06	H5	107.0	109.5
C07	C06	H6	107.0	109.5
C06	C07	H7	108.7	109.7
C07	S08	C09	110.6	101.8
S08	C07	H7	105.9	109.6
C12	C11	H9	121.2	120.1
C10	C09	S08	117.1	120.0
C09	C10	H8	119.6	120.0
C11	C10	H8	119.7	120.0
H1	C01	H2	109.4	109.5
H1	C01	H3	109.5	109.5
H2	C01	H3	109.5	109.5
H5	C06	H6	109.5	109.5

Torsion Angles for O6V

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C29	C28	C27	H15	179.9	179.7
C29	C24	C23	C30	94.0	310.3
C29	C24	C25	H13	180.7	180.3
S21	C22	C23	C24	180.9	180.0
S21	C22	C23	C30	359.3	359.5
C23	C22	S21	H12	180.0	180.3
S21	C22	C23	H12	180.0	179.7
C24	C23	C22	C30	181.6	180.5
C22	C23	C24	C25	93.6	310.0
C20	C30	C23	C22	0.6	0.5
C22	C23	C30	C31	180.3	180.3
C28	C27	C26	H14	180.0	180.0
C24	C23	C22	S21	180.9	180.0
C22	C23	C24	C30	178.2	179.4
C24	C23	C22	H12	0.9	0.3
C20	C30	C23	C24	179.1	180.0
C24	C23	C30	C31	358.7	359.7
C23	C24	C25	C26	179.4	180.0
C23	C24	C25	H13	359.4	360.0
C30	C23	C22	S21	359.3	359.5
C22	C23	C30	C24	181.5	180.5
C30	C23	C22	H12	179.3	179.8
C30	C23	C24	C25	275.3	130.6
C23	C30	C20	N19	179.8	180.0
C20	C30	C23	C31	180.3	180.2
C23	C30	C31	O32	0.3	0.3
C23	C30	C31	N33	180.6	179.8
C25	C24	C23	C30	275.3	130.6
C26	C25	C24	H13	180.0	180.0
C24	C25	C26	H14	179.7	180.0
C22	C23	C30	C20	0.6	0.5
C24	C23	C30	C20	179.1	180.0
C23	C30	C20	C31	179.7	179.8
C20	C30	C31	O32	180.0	180.0
C20	C30	C31	N33	0.3	359.5
N19	C20	C30	C23	179.8	180.0
N19	C20	C30	C31	0.0	0.2
C20	N19	C18	N33	0.1	360.0
C20	C30	C31	C23	179.7	179.7
C31	C30	C20	N19	0.0	0.2
N33	C31	C30	O32	180.2	179.5
C18	N33	C31	C30	359.6	0.5
C30	C31	N33	H19	179.6	180.5
C27	C26	C25	H13	179.7	180.0
C25	C26	C27	H14	180.0	179.9
N19	C18	N33	C31	0.2	359.7
N19	C18	N33	H19	180.2	179.7
N19	C18	C02	O03	259.7	255.3
N19	C18	C02	H4	140.4	135.3
C18	C02	C01	O03	234.9	240.0
C18	C02	C01	H4	116.1	120.0
C01	C02	O03	C04	202.6	90.0
O03	C02	C01	H4	241.2	240.0
H1	C01	C02	H2	240.0	240.0
H1	C01	C02	H3	120.0	120.0
H2	C01	C02	H3	240.0	240.0
C30	C31	O32	N33	180.2	179.5
C18	N33	C31	O32	179.8	180.0
O32	C31	N33	H19	359.8	0.0
C30	C31	N33	O32	179.8	180.5
C18	N33	C31	H19	180.0	180.0
C30	C31	N33	C18	359.6	0.5
C31	N33	C18	H19	180.0	180.0
N33	C18	C02	O03	79.1	75.0
N33	C18	C02	H4	319.7	315.0
C01	C02	C18	O03	124.3	120.0
C18	C02	C01	H1	180.0	300.0
C18	C02	C01	H2	300.0	60.0
C18	C02	C01	H3	60.0	180.0
C01	C02	C18	H4	243.7	240.0
C18	C02	O03	C04	325.8	210.0
O03	C02	C18	H4	119.4	120.0
C24	C25	C26	H13	180.0	180.0
C27	C26	C25	H14	180.0	180.1
O03	C02	C01	H1	305.2	60.0
O03	C02	C01	H2	65.1	180.0
O03	C02	C01	H3	185.1	300.0
C01	C02	O03	H4	118.3	120.0
C18	C02	O03	H4	241.4	240.0
C02	O03	C04	O05	77.1	0.0
C04	O03	C02	H4	84.4	330.0
C06	C04	O03	O05	179.4	180.0
O03	C04	C06	H5	267.6	300.0
O03	C04	C06	H6	24.9	60.0
O17	C16	C07	S08	201.2	140.9
O17	C16	C07	H7	84.7	21.2
O05	C04	C06	C07	325.7	360.0
O05	C04	C06	H5	87.0	120.0
O05	C04	C06	H6	204.3	240.0
C02	O03	C04	C06	256.5	180.0
O03	C04	C06	O05	180.6	180.0
C04	C06	C07	S08	67.5	295.0
C07	C06	C04	H5	238.6	240.0
C07	C06	C04	H6	121.4	120.0
C04	C06	C07	H7	184.8	55.4
H5	C06	C04	H6	242.7	240.0
N15	C16	C07	S08	21.4	320.9
N15	C16	C07	H7	264.9	201.2
N15	C14	C13	H11	0.0	0.5
N15	C14	C09	S08	359.9	359.8
C06	C07	C16	S08	124.7	119.7
C16	C07	C06	H5	182.9	56.0
C16	C07	C06	H6	65.6	296.0
C06	C07	C16	H7	241.2	239.5
C16	C07	S08	C09	330.6	45.3
S08	C07	C16	H7	116.5	119.8
C14	C13	C12	H10	180.0	180.1
C13	C14	C09	S08	180.0	180.7
C13	C12	C11	H9	180.0	180.3
C07	S08	C09	C14	20.0	330.4
C10	C09	C14	S08	180.1	180.0
C14	C09	C10	H8	179.9	179.7
C07	C06	C04	O05	325.7	360.0
C04	C06	C07	H5	121.3	120.0
C04	C06	C07	H6	238.6	240.0
C16	C07	C06	S08	236.7	241.0
C16	C07	C06	H7	119.5	120.6
C06	C07	S08	C09	208.4	285.6
S08	C07	C06	H7	242.7	239.6
H5	C06	C07	H6	117.3	120.0
C16	C07	S08	H7	241.2	240.1
C14	C09	S08	C07	20.0	330.4
S08	C07	C06	H5	306.1	175.0
S08	C07	C06	H6	188.8	55.0
C06	C07	S08	H7	118.9	120.4
C10	C09	S08	C07	199.9	150.5
C12	C11	C10	H8	180.0	179.9
C09	S08	C07	H7	89.4	165.2
S08	C09	C10	H8	360.0	359.6
C14	C09	C10	S08	179.9	180.0
C07	S08	C09	C10	199.9	150.5
C11	C10	C09	H8	180.0	180.0
C11	C10	C09	S08	180.0	179.6
C09	C10	C11	H8	180.0	180.0
H1	C01	C02	O03	305.2	60.0
C02	C01	H1	H2	120.0	119.9
C02	C01	H1	H3	240.0	240.0
H1	C01	C02	H4	64.0	180.0
H2	C01	H1	H3	120.0	120.1
H2	C01	C02	O03	65.1	180.0
C02	C01	H2	H1	240.0	240.0
C02	C01	H2	H3	120.0	120.0
H2	C01	C02	H4	183.9	300.0
H1	C01	H2	H3	240.0	240.0
H3	C01	C02	O03	185.1	300.0
C02	C01	H3	H1	120.0	120.0
C02	C01	H3	H2	240.0	240.0
H3	C01	C02	H4	303.9	60.0
H1	C01	H3	H2	120.0	120.1
C01	C02	H4	O03	239.4	240.0
H4	C02	C01	H1	64.0	180.0
H4	C02	C01	H2	183.9	300.0
H4	C02	C01	H3	303.9	60.0
C18	C02	H4	O03	122.0	120.0
H4	C02	O03	C04	84.4	330.0
H5	C06	C04	O05	87.0	120.0
C04	C06	H5	C07	231.3	240.0
C04	C06	H5	H6	115.6	120.0
H5	C06	C07	S08	306.1	175.0
C07	C06	H5	H6	244.4	240.0
H5	C06	C07	H7	63.4	295.4
H6	C06	C04	O05	204.3	240.0
C04	C06	H6	C07	128.7	120.0
C04	C06	H6	H5	244.4	240.1
H6	C06	C07	S08	188.8	55.0
C07	C06	H6	H5	115.6	120.0
H6	C06	C07	H7	306.1	175.4
C16	C07	H7	S08	119.4	119.1
C06	C07	H7	S08	238.3	239.6
H7	C07	C06	H5	63.4	295.4
H7	C07	C06	H6	306.1	175.4
H7	C07	S08	C09	89.4	165.2
H8	C10	C09	S08	360.0	359.6
H9	C11	C10	H8	0.1	359.8
H10	C12	C11	H9	360.0	0.2
H11	C13	C12	H10	0.0	360.0
C23	C22	H12	S21	180.0	179.7
H12	C22	C23	C24	0.9	0.3
H12	C22	C23	C30	179.3	179.8
C24	C25	H13	C26	180.0	180.0
H13	C25	C26	H14	359.7	359.9
H14	C26	C25	H13	359.7	359.9
H15	C27	C26	H14	0.0	0.0
H16	C28	C27	H15	359.9	360.0
H17	C29	C28	H16	0.5	359.7
H19	N33	C31	O32	359.8	0.0
C18	N33	H19	C31	180.0	180.0