PDB Chemical Component O60

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for O60

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.480	1.530
C1	O3	1.461	1.429
N1	S1	1.581	1.656
O1	S1	1.416	1.421
S1	O2	1.420	1.421
S1	O3	1.566	1.522
C2	C3	1.501	1.530
N2	S2	1.588	1.656
S2	O4	1.572	1.522
S2	O5	1.425	1.420
S2	O6	1.426	1.421
C3	C4	1.504	1.530
C4	C5	1.500	1.530
O4	C10	1.455	1.429
C5	C6	1.472	1.530
C6	C7	1.500	1.530
C7	C8	1.505	1.530
C8	C9	1.498	1.531
C9	C10	1.469	1.530
C1	H1	1.100	1.091
C1	H1A	1.100	1.089
N1	HN1	1.000	0.970
N1	HN1A	0.999	0.971
C2	H2	1.101	1.090
C2	H2A	1.100	1.090
N2	HN2	1.000	0.970
N2	HN2A	1.000	0.971
C3	H3	1.100	1.090
C3	H3A	1.100	1.090
C4	H4	1.100	1.090
C4	H4A	1.100	1.090
C5	H5	1.100	1.090
C5	H5A	1.100	1.090
C6	H6	1.100	1.090
C6	H6A	1.100	1.090
C7	H7	1.100	1.090
C7	H7A	1.101	1.090
C8	H8	1.100	1.089
C8	H8A	1.099	1.090
C9	H9	1.100	1.089
C9	H9A	1.100	1.091
C10	H10	1.100	1.091
C10	H10A	1.100	1.089

Bond Angles for O60

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O3	107.5	109.5
C1	C2	C3	113.9	109.5
C2	C1	H1	110.1	109.4
C2	C1	H1A	110.2	109.5
C1	C2	H2	108.0	109.5
C1	C2	H2A	108.0	109.5
C1	O3	S1	116.8	114.0
O3	C1	H1	110.1	109.4
O3	C1	H1A	110.1	109.5
N1	S1	O1	109.1	106.4
N1	S1	O2	108.4	106.4
N1	S1	O3	106.6	107.2
S1	N1	HN1	109.5	120.0
S1	N1	HN1A	109.5	120.0
O1	S1	O2	119.6	123.1
O1	S1	O3	105.8	106.4
O2	S1	O3	106.6	106.4
C2	C3	C4	113.3	109.5
C3	C2	H2	108.0	109.5
C3	C2	H2A	108.0	109.5
C2	C3	H3	108.2	109.5
C2	C3	H3A	108.2	109.5
N2	S2	O4	106.8	107.2
N2	S2	O5	108.8	106.4
N2	S2	O6	108.5	106.4
S2	N2	HN2	109.5	120.0
S2	N2	HN2A	109.4	119.9
O4	S2	O5	106.3	106.4
O4	S2	O6	106.1	106.4
S2	O4	C10	117.7	114.0
O5	S2	O6	119.7	123.2
C3	C4	C5	114.1	109.4
C4	C3	H3	108.2	109.5
C4	C3	H3A	108.2	109.5
C3	C4	H4	108.0	109.4
C3	C4	H4A	108.0	109.5
C4	C5	C6	113.5	109.4
C5	C4	H4	108.0	109.5
C5	C4	H4A	108.0	109.5
C4	C5	H5	108.2	109.4
C4	C5	H5A	108.1	109.4
O4	C10	C9	105.9	109.5
O4	C10	H10	110.7	109.4
O4	C10	H10A	110.7	109.5
C5	C6	C7	113.5	109.4
C6	C5	H5	108.1	109.5
C6	C5	H5A	108.2	109.5
C5	C6	H6	108.1	109.5
C5	C6	H6A	108.2	109.5
C6	C7	C8	113.9	109.4
C7	C6	H6	108.2	109.4
C7	C6	H6A	108.2	109.4
C6	C7	H7	108.0	109.5
C6	C7	H7A	108.0	109.5
C7	C8	C9	113.4	109.4
C8	C7	H7	108.0	109.5
C8	C7	H7A	108.0	109.5
C7	C8	H8	108.2	109.5
C7	C8	H8A	108.2	109.5
C8	C9	C10	113.4	109.4
C9	C8	H8	108.2	109.5
C9	C8	H8A	108.2	109.5
C8	C9	H9	108.2	109.5
C8	C9	H9A	108.2	109.4
C10	C9	H9	108.2	109.5
C10	C9	H9A	108.2	109.4
C9	C10	H10	110.6	109.4
C9	C10	H10A	110.7	109.5
H1	C1	H1A	108.8	109.5
HN1	N1	HN1A	109.5	120.0
H2	C2	H2A	110.9	109.4
HN2	N2	HN2A	109.5	120.1
H3	C3	H3A	110.7	109.5
H4	C4	H4A	110.9	109.5
H5	C5	H5A	110.8	109.5
H6	C6	H6A	110.7	109.5
H7	C7	H7A	110.9	109.5
H8	C8	H8A	110.7	109.5
H9	C9	H9A	110.7	109.5
H10	C10	H10A	108.2	109.5

Torsion Angles for O60

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O3	S1	174.0	180.0
O3	C1	C2	H1	240.0	240.0
O3	C1	C2	H1A	120.0	120.1
C1	C2	C3	C4	181.6	180.0
C3	C2	C1	H2	240.0	240.0
C3	C2	C1	H2A	120.0	120.0
C1	C2	C3	H3	301.6	300.0
C1	C2	C3	H3A	61.6	60.0
H1	C1	C2	H1A	240.0	240.0
H2	C2	C1	H2A	240.0	240.0
O3	C1	C2	C3	296.0	180.0
C2	C1	O3	H1	120.0	119.9
C2	C1	O3	H1A	240.0	240.0
O3	C1	C2	H2	56.0	300.0
O3	C1	C2	H2A	176.0	60.0
N1	S1	O3	C1	43.7	75.0
O1	S1	O3	C1	287.6	321.4
O2	S1	O3	C1	159.3	188.5
H1	C1	O3	H1A	120.0	120.0
C1	O3	S1	N1	43.7	75.0
O1	S1	N1	O2	228.2	227.1
O1	S1	N1	O3	113.9	113.5
O2	S1	N1	O3	245.6	246.4
HN1	N1	S1	HN1A	240.0	180.0
C1	O3	S1	O1	287.6	321.4
N1	S1	O1	O2	125.5	122.9
N1	S1	O1	O3	245.7	245.9
O1	S1	N1	HN1	180.0	113.5
O1	S1	N1	HN1A	300.0	293.5
O2	S1	O1	O3	120.2	123.0
C1	O3	S1	O2	159.3	188.5
N1	S1	O2	O1	234.1	237.1
N1	S1	O2	O3	114.4	114.1
O2	S1	N1	HN1	311.8	246.4
O2	S1	N1	HN1A	71.8	66.4
O1	S1	O2	O3	240.2	237.1
S1	O3	C1	H1	54.0	60.1
S1	O3	C1	H1A	294.0	300.0
N1	S1	O3	O1	116.1	113.5
N1	S1	O3	O2	244.4	246.4
O3	S1	N1	HN1	66.1	0.0
O3	S1	N1	HN1A	186.1	180.0
O1	S1	O3	O2	128.3	132.9
C3	C2	C1	O3	296.0	180.0
C3	C2	C1	H1	56.0	300.0
C3	C2	C1	H1A	176.0	60.0
C1	C2	C3	H2	120.0	120.0
C1	C2	C3	H2A	240.0	240.0
C2	C3	C4	C5	294.7	180.0
C4	C3	C2	H3	240.0	240.0
C4	C3	C2	H3A	120.0	120.0
C2	C3	C4	H4	54.8	299.9
C2	C3	C4	H4A	174.8	60.0
H2	C2	C3	H2A	120.0	120.0
H3	C3	C2	H3A	240.0	240.0
O4	S2	N2	O5	245.7	246.5
O4	S2	N2	O6	114.0	113.5
N2	S2	O4	C10	50.6	75.0
O5	S2	N2	O6	228.3	227.1
HN2	N2	S2	HN2A	240.0	179.9
N2	S2	O4	O5	116.0	113.5
N2	S2	O4	O6	244.3	246.5
O4	S2	N2	HN2	180.0	360.0
O4	S2	N2	HN2A	300.0	180.0
O5	S2	O4	O6	128.4	133.0
S2	O4	C10	C9	188.9	180.0
S2	O4	C10	H10	308.9	299.9
S2	O4	C10	H10A	68.9	60.0
N2	S2	O5	O4	245.3	245.9
N2	S2	O5	O6	125.4	122.9
O5	S2	N2	HN2	294.3	113.5
O5	S2	N2	HN2A	54.3	293.6
O4	S2	O5	O6	240.1	237.0
O5	S2	O4	C10	294.6	321.5
N2	S2	O6	O4	114.5	114.1
N2	S2	O6	O5	234.5	237.0
O6	S2	N2	HN2	66.0	246.5
O6	S2	N2	HN2A	186.0	66.5
O4	S2	O6	O5	120.0	123.0
O6	S2	O4	C10	166.3	188.5
C4	C3	C2	H2	61.6	60.0
C4	C3	C2	H2A	301.6	300.0
C2	C3	C4	H3	120.0	120.0
C2	C3	C4	H3A	240.0	240.0
C3	C4	C5	C6	177.1	180.0
C5	C4	C3	H4	240.0	240.1
C5	C4	C3	H4A	120.0	120.0
C3	C4	C5	H5	297.1	300.0
C3	C4	C5	H5A	57.1	60.0
H3	C3	C4	H3A	120.0	120.0
H4	C4	C3	H4A	240.0	239.9
C5	C4	C3	H3	174.8	60.0
C5	C4	C3	H3A	54.7	300.0
C3	C4	C5	H4	120.0	119.9
C3	C4	C5	H4A	240.0	240.0
C4	C5	C6	C7	173.3	180.0
C6	C5	C4	H5	240.0	240.0
C6	C5	C4	H5A	120.0	120.0
C4	C5	C6	H6	293.4	300.0
C4	C5	C6	H6A	53.3	60.0
H4	C4	C5	H4A	120.0	120.1
H5	C5	C4	H5A	240.0	240.0
C10	O4	S2	O5	294.6	321.5
C10	O4	S2	O6	166.3	188.5
C8	C9	C10	O4	161.5	180.0
O4	C10	C9	H9	41.5	60.0
O4	C10	C9	H9A	281.5	299.9
C9	C10	O4	H10	240.0	240.1
C9	C10	O4	H10A	120.0	120.1
H10	C10	O4	H10A	240.0	240.0
C6	C5	C4	H4	57.1	60.1
C6	C5	C4	H4A	297.1	300.0
C4	C5	C6	H5	120.0	120.0
C4	C5	C6	H5A	240.0	240.0
C5	C6	C7	C8	186.6	180.0
C7	C6	C5	H6	240.0	240.0
C7	C6	C5	H6A	120.0	120.0
C5	C6	C7	H7	306.6	300.0
C5	C6	C7	H7A	66.6	60.0
H5	C5	C6	H5A	120.0	120.1
H6	C6	C5	H6A	240.0	239.9
C7	C6	C5	H5	53.3	60.0
C7	C6	C5	H5A	293.3	300.0
C5	C6	C7	H6	120.0	120.0
C5	C6	C7	H6A	240.0	240.0
C6	C7	C8	C9	65.3	180.0
C8	C7	C6	H7	240.0	240.0
C8	C7	C6	H7A	120.0	120.0
C6	C7	C8	H8	185.4	300.0
C6	C7	C8	H8A	305.4	60.0
H6	C6	C7	H6A	120.0	120.0
H7	C7	C6	H7A	240.0	240.0
C8	C7	C6	H6	66.6	60.0
C8	C7	C6	H6A	306.6	300.0
C6	C7	C8	H7	120.0	120.0
C6	C7	C8	H7A	240.0	240.0
C7	C8	C9	C10	197.7	180.0
C9	C8	C7	H8	240.0	240.0
C9	C8	C7	H8A	120.0	120.0
C7	C8	C9	H9	317.7	300.0
C7	C8	C9	H9A	77.6	60.1
H7	C7	C8	H7A	120.0	120.0
H8	C8	C7	H8A	240.0	240.0
O4	C10	C9	C8	161.5	180.0
C9	C8	C7	H7	305.4	60.0
C9	C8	C7	H7A	185.3	300.0
C7	C8	C9	H8	120.0	120.0
C7	C8	C9	H8A	240.0	240.0
C10	C9	C8	H9	240.0	240.0
C10	C9	C8	H9A	120.0	119.9
C8	C9	C10	H10	41.5	60.1
C8	C9	C10	H10A	281.6	300.1
H8	C8	C9	H8A	120.0	120.0
H9	C9	C8	H9A	240.0	239.9
O4	C10	C9	H10	120.0	119.9
O4	C10	C9	H10A	240.0	239.9
C10	C9	C8	H8	77.6	60.0
C10	C9	C8	H8A	317.7	299.9
C8	C9	C10	H9	120.0	120.0
C8	C9	C10	H9A	240.0	240.1
H9	C9	C10	H9A	120.0	120.1
H10	C10	C9	H10A	119.9	120.0
C2	C1	H1	O3	241.6	240.0
H1	C1	C2	C3	56.0	300.0
C2	C1	H1	H1A	120.8	120.0
H1	C1	C2	H2	176.0	60.0
H1	C1	C2	H2A	296.0	179.9
H1	C1	O3	S1	54.0	60.1
O3	C1	H1	H1A	239.2	240.0
C2	C1	H1A	O3	118.4	120.0
H1A	C1	C2	C3	176.0	60.0
C2	C1	H1A	H1	239.2	240.0
H1A	C1	C2	H2	296.0	180.0
H1A	C1	C2	H2A	56.0	299.9
H1A	C1	O3	S1	294.0	300.0
O3	C1	H1A	H1	120.8	120.0
HN1	N1	S1	O1	180.0	113.5
HN1	N1	S1	O2	311.8	246.4
HN1	N1	S1	O3	66.1	0.0
S1	N1	HN1	HN1A	120.0	180.0
HN1A	N1	S1	O1	300.0	293.5
HN1A	N1	S1	O2	71.8	66.4
HN1A	N1	S1	O3	186.1	180.0
S1	N1	HN1A	HN1	240.0	180.0
H2	C2	C1	O3	56.0	300.0
C1	C2	H2	C3	236.4	240.0
H2	C2	C1	H1	176.0	60.0
H2	C2	C1	H1A	296.0	180.0
C1	C2	H2	H2A	118.2	120.0
H2	C2	C3	C4	61.6	60.0
C3	C2	H2	H2A	241.8	240.0
H2	C2	C3	H3	181.6	180.0
H2	C2	C3	H3A	301.6	300.0
H2A	C2	C1	O3	176.0	60.0
C1	C2	H2A	C3	123.6	120.0
H2A	C2	C1	H1	296.0	179.9
H2A	C2	C1	H1A	56.0	299.9
C1	C2	H2A	H2	241.8	240.0
H2A	C2	C3	C4	301.6	300.0
C3	C2	H2A	H2	118.2	120.0
H2A	C2	C3	H3	61.6	60.0
H2A	C2	C3	H3A	181.6	180.0
HN2	N2	S2	O4	180.0	360.0
HN2	N2	S2	O5	294.3	113.5
HN2	N2	S2	O6	66.0	246.5
S2	N2	HN2	HN2A	120.0	180.1
HN2A	N2	S2	O4	300.0	180.0
HN2A	N2	S2	O5	54.3	293.6
HN2A	N2	S2	O6	186.0	66.5
S2	N2	HN2A	HN2	240.0	179.9
C2	C3	H3	C4	236.8	240.0
H3	C3	C2	H2	181.6	180.0
H3	C3	C2	H2A	61.6	60.0
C2	C3	H3	H3A	118.4	120.0
H3	C3	C4	C5	174.8	60.0
C4	C3	H3	H3A	241.6	240.0
H3	C3	C4	H4	294.8	180.0
H3	C3	C4	H4A	54.8	300.0
C2	C3	H3A	C4	123.2	120.0
H3A	C3	C2	H2	301.6	300.0
H3A	C3	C2	H2A	181.6	180.0
C2	C3	H3A	H3	241.6	240.0
H3A	C3	C4	C5	54.7	300.0
C4	C3	H3A	H3	118.4	120.0
H3A	C3	C4	H4	174.8	59.9
H3A	C3	C4	H4A	294.8	180.0
C3	C4	H4	C5	236.2	240.1
H4	C4	C3	H3	294.8	180.0
H4	C4	C3	H3A	174.8	59.9
C3	C4	H4	H4A	118.1	120.0
H4	C4	C5	C6	57.1	60.1
C5	C4	H4	H4A	241.9	239.9
H4	C4	C5	H5	177.1	180.1
H4	C4	C5	H5A	297.1	300.0
C3	C4	H4A	C5	123.8	120.0
H4A	C4	C3	H3	54.8	300.0
H4A	C4	C3	H3A	294.8	180.0
C3	C4	H4A	H4	241.9	240.0
H4A	C4	C5	C6	297.1	300.0
C5	C4	H4A	H4	118.1	120.0
H4A	C4	C5	H5	57.1	60.0
H4A	C4	C5	H5A	177.1	180.0
C4	C5	H5	C6	236.7	240.1
H5	C5	C4	H4	177.1	180.1
H5	C5	C4	H4A	57.1	60.0
C4	C5	H5	H5A	118.3	120.0
H5	C5	C6	C7	53.3	60.0
C6	C5	H5	H5A	241.6	239.9
H5	C5	C6	H6	173.3	180.0
H5	C5	C6	H6A	293.3	300.1
C4	C5	H5A	C6	123.3	119.9
H5A	C5	C4	H4	297.1	300.0
H5A	C5	C4	H4A	177.1	180.0
C4	C5	H5A	H5	241.6	240.1
H5A	C5	C6	C7	293.3	300.0
C6	C5	H5A	H5	118.3	120.1
H5A	C5	C6	H6	53.3	59.9
H5A	C5	C6	H6A	173.3	180.0
C5	C6	H6	C7	236.7	240.1
H6	C6	C5	H5	173.3	180.0
H6	C6	C5	H5A	53.3	59.9
C5	C6	H6	H6A	118.4	120.1
H6	C6	C7	C8	66.6	60.0
C7	C6	H6	H6A	241.7	240.0
H6	C6	C7	H7	186.6	180.0
H6	C6	C7	H7A	306.6	300.0
C5	C6	H6A	C7	123.3	119.9
H6A	C6	C5	H5	293.3	300.1
H6A	C6	C5	H5A	173.3	180.0
C5	C6	H6A	H6	241.7	239.9
H6A	C6	C7	C8	306.6	300.0
C7	C6	H6A	H6	118.4	119.9
H6A	C6	C7	H7	66.6	60.0
H6A	C6	C7	H7A	186.6	180.0
C6	C7	H7	C8	236.4	240.0
H7	C7	C6	H6	186.6	180.0
H7	C7	C6	H6A	66.6	60.0
C6	C7	H7	H7A	118.2	120.0
H7	C7	C8	C9	305.4	60.0
C8	C7	H7	H7A	241.8	240.0
H7	C7	C8	H8	65.4	180.0
H7	C7	C8	H8A	185.4	300.0
C6	C7	H7A	C8	123.6	120.0
H7A	C7	C6	H6	306.6	300.0
H7A	C7	C6	H6A	186.6	180.0
C6	C7	H7A	H7	241.8	240.0
H7A	C7	C8	C9	185.3	300.0
C8	C7	H7A	H7	118.2	120.0
H7A	C7	C8	H8	305.3	60.0
H7A	C7	C8	H8A	65.3	180.0
C7	C8	H8	C9	236.8	240.0
H8	C8	C7	H7	65.4	180.0
H8	C8	C7	H7A	305.3	60.0
C7	C8	H8	H8A	118.4	120.0
H8	C8	C9	C10	77.6	60.0
C9	C8	H8	H8A	241.6	240.0
H8	C8	C9	H9	197.6	180.0
H8	C8	C9	H9A	317.6	300.1
C7	C8	H8A	C9	123.2	119.9
H8A	C8	C7	H7	185.4	300.0
H8A	C8	C7	H7A	65.3	180.0
C7	C8	H8A	H8	241.6	240.0
H8A	C8	C9	C10	317.7	299.9
C9	C8	H8A	H8	118.4	120.0
H8A	C8	C9	H9	77.7	60.0
H8A	C8	C9	H9A	197.6	180.0
C8	C9	H9	C10	236.8	240.0
H9	C9	C8	H8	197.6	180.0
H9	C9	C8	H8A	77.7	60.0
C8	C9	H9	H9A	118.4	120.0
C10	C9	H9	H9A	241.6	240.0
H9	C9	C10	H10	281.5	300.1
H9	C9	C10	H10A	161.6	180.0
C8	C9	H9A	C10	123.2	119.9
H9A	C9	C8	H8	317.6	300.1
H9A	C9	C8	H8A	197.6	180.0
C8	C9	H9A	H9	241.6	239.9
C10	C9	H9A	H9	118.4	120.0
H9A	C9	C10	H10	161.5	180.0
H9A	C9	C10	H10A	41.6	60.0
O4	C10	H10	C9	242.9	240.1
O4	C10	H10	H10A	121.5	120.0
H10	C10	C9	H9	281.5	300.1
H10	C10	C9	H9A	161.5	180.0
C9	C10	H10	H10A	238.6	240.0
O4	C10	H10A	C9	117.2	120.0
O4	C10	H10A	H10	238.5	240.0
H10A	C10	C9	H9	161.6	180.0
H10A	C10	C9	H9A	41.6	60.0
C9	C10	H10A	H10	121.4	120.0