PDB Chemical Component O48

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for O48

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.518	1.530
C1	O3	1.462	1.429
N1	S1	1.577	1.656
O1	S1	1.419	1.421
S1	O2	1.420	1.421
S1	O3	1.580	1.522
C2	C3	1.524	1.529
C3	C4	1.512	1.530
C4	C5	1.507	1.530
C5	C6	1.500	1.530
C6	C7	1.508	1.530
C7	C8	1.504	1.531
C8	C9	1.509	1.529
C9	C10	1.498	1.530
C1	H1	1.100	1.091
C1	H1A	1.100	1.090
N1	HN1	1.000	0.970
N1	HN1A	1.000	0.970
C2	H2	1.100	1.090
C2	H2A	1.100	1.090
C3	H3	1.100	1.090
C3	H3A	1.100	1.090
C4	H4	1.100	1.090
C4	H4A	1.100	1.090
C5	H5	1.100	1.090
C5	H5A	1.100	1.090
C6	H6	1.099	1.090
C6	H6A	1.100	1.090
C7	H7	1.100	1.090
C7	H7A	1.100	1.090
C8	H8	1.100	1.090
C8	H8A	1.100	1.090
C9	H9	1.100	1.090
C9	H9A	1.099	1.090
C10	H10	1.100	1.089
C10	H10A	1.100	1.090
C10	H10B	1.100	1.090

Bond Angles for O48

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O3	108.1	109.5
C1	C2	C3	115.1	109.5
C2	C1	H1	109.9	109.4
C2	C1	H1A	109.9	109.5
C1	C2	H2	107.6	109.4
C1	C2	H2A	107.6	109.4
C1	O3	S1	120.2	114.0
O3	C1	H1	109.9	109.4
O3	C1	H1A	110.0	109.5
N1	S1	O1	110.0	106.4
N1	S1	O2	108.4	106.4
N1	S1	O3	107.9	107.2
S1	N1	HN1	109.5	120.0
S1	N1	HN1A	109.4	120.0
O1	S1	O2	118.6	123.2
O1	S1	O3	107.1	106.4
O2	S1	O3	104.2	106.4
C2	C3	C4	115.3	109.5
C3	C2	H2	107.6	109.5
C3	C2	H2A	107.6	109.5
C2	C3	H3	107.6	109.5
C2	C3	H3A	107.6	109.5
C3	C4	C5	112.8	109.5
C4	C3	H3	107.6	109.5
C4	C3	H3A	107.6	109.4
C3	C4	H4	108.4	109.5
C3	C4	H4A	108.4	109.4
C4	C5	C6	114.3	109.5
C5	C4	H4	108.4	109.5
C5	C4	H4A	108.4	109.5
C4	C5	H5	107.9	109.5
C4	C5	H5A	107.9	109.4
C5	C6	C7	113.6	109.5
C6	C5	H5	107.9	109.5
C6	C5	H5A	107.9	109.5
C5	C6	H6	108.1	109.5
C5	C6	H6A	108.2	109.5
C6	C7	C8	113.2	109.5
C7	C6	H6	108.1	109.5
C7	C6	H6A	108.1	109.4
C6	C7	H7	108.3	109.5
C6	C7	H7A	108.2	109.5
C7	C8	C9	114.5	109.5
C8	C7	H7	108.3	109.5
C8	C7	H7A	108.2	109.4
C7	C8	H8	107.8	109.5
C7	C8	H8A	107.8	109.4
C8	C9	C10	114.7	109.5
C9	C8	H8	107.8	109.5
C9	C8	H8A	107.8	109.5
C8	C9	H9	107.8	109.5
C8	C9	H9A	107.8	109.5
C10	C9	H9	107.8	109.5
C10	C9	H9A	107.8	109.4
C9	C10	H10	109.5	109.5
C9	C10	H10A	109.4	109.5
C9	C10	H10B	109.5	109.4
H1	C1	H1A	109.0	109.5
HN1	N1	HN1A	109.5	120.0
H2	C2	H2A	111.2	109.5
H3	C3	H3A	111.3	109.4
H4	C4	H4A	110.5	109.5
H5	C5	H5A	111.0	109.5
H6	C6	H6A	110.8	109.5
H7	C7	H7A	110.7	109.5
H8	C8	H8A	111.1	109.5
H9	C9	H9A	111.1	109.4
H10	C10	H10A	109.5	109.5
H10	C10	H10B	109.5	109.5
H10A	C10	H10B	109.5	109.4

Torsion Angles for O48

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O3	S1	105.8	180.0
O3	C1	C2	H1	240.0	240.0
O3	C1	C2	H1A	120.0	120.1
C1	C2	C3	C4	75.1	180.0
C3	C2	C1	H2	240.0	240.0
C3	C2	C1	H2A	120.0	120.0
C1	C2	C3	H3	195.1	300.1
C1	C2	C3	H3A	315.1	60.0
H1	C1	C2	H1A	240.0	240.1
H2	C2	C1	H2A	240.0	240.0
O3	C1	C2	C3	59.5	180.0
C2	C1	O3	H1	120.0	120.0
C2	C1	O3	H1A	240.0	240.0
O3	C1	C2	H2	179.5	300.0
O3	C1	C2	H2A	299.5	60.0
N1	S1	O3	C1	45.6	74.9
O1	S1	O3	C1	287.2	321.4
O2	S1	O3	C1	160.7	188.5
H1	C1	O3	H1A	120.0	120.0
C1	O3	S1	N1	45.6	74.9
O1	S1	N1	O2	228.9	227.1
O1	S1	N1	O3	116.6	113.5
O2	S1	N1	O3	247.7	246.4
HN1	N1	S1	HN1A	240.0	179.9
C1	O3	S1	O1	287.2	321.4
N1	S1	O1	O2	125.5	123.0
N1	S1	O1	O3	242.9	245.9
O1	S1	N1	HN1	180.0	353.5
O1	S1	N1	HN1A	300.0	173.6
O2	S1	O1	O3	117.4	122.9
C1	O3	S1	O2	160.7	188.5
N1	S1	O2	O1	233.7	237.0
N1	S1	O2	O3	114.8	114.1
O2	S1	N1	HN1	311.1	126.4
O2	S1	N1	HN1A	71.1	306.5
O1	S1	O2	O3	241.0	237.1
S1	O3	C1	H1	345.8	60.0
S1	O3	C1	H1A	225.8	300.1
N1	S1	O3	O1	118.4	113.5
N1	S1	O3	O2	244.9	246.4
O3	S1	N1	HN1	63.4	240.0
O3	S1	N1	HN1A	183.4	60.1
O1	S1	O3	O2	126.5	132.9
C3	C2	C1	O3	59.5	180.0
C3	C2	C1	H1	179.5	300.0
C3	C2	C1	H1A	299.5	60.0
C1	C2	C3	H2	120.0	120.0
C1	C2	C3	H2A	240.0	240.0
C2	C3	C4	C5	181.0	180.0
C4	C3	C2	H3	240.0	239.9
C4	C3	C2	H3A	120.0	120.0
C2	C3	C4	H4	301.0	300.0
C2	C3	C4	H4A	61.0	60.0
H2	C2	C3	H2A	120.0	120.0
H3	C3	C2	H3A	240.0	240.1
C4	C3	C2	H2	315.1	60.0
C4	C3	C2	H2A	195.1	300.0
C2	C3	C4	H3	120.0	120.1
C2	C3	C4	H3A	240.0	240.0
C3	C4	C5	C6	176.6	180.0
C5	C4	C3	H4	240.0	240.0
C5	C4	C3	H4A	120.0	120.0
C3	C4	C5	H5	296.6	300.0
C3	C4	C5	H5A	56.6	60.0
H3	C3	C4	H3A	120.0	119.9
H4	C4	C3	H4A	240.0	240.0
C5	C4	C3	H3	61.0	59.9
C5	C4	C3	H3A	301.0	300.0
C3	C4	C5	H4	120.0	120.0
C3	C4	C5	H4A	240.0	240.0
C4	C5	C6	C7	182.8	180.0
C6	C5	C4	H5	240.0	240.0
C6	C5	C4	H5A	120.0	120.0
C4	C5	C6	H6	302.9	300.0
C4	C5	C6	H6A	62.8	60.1
H4	C4	C5	H4A	120.0	120.0
H5	C5	C4	H5A	240.0	240.0
C6	C5	C4	H4	56.6	60.0
C6	C5	C4	H4A	296.7	300.0
C4	C5	C6	H5	120.0	120.0
C4	C5	C6	H5A	240.0	240.1
C5	C6	C7	C8	170.6	180.0
C7	C6	C5	H6	240.0	240.0
C7	C6	C5	H6A	120.0	119.9
C5	C6	C7	H7	290.6	300.0
C5	C6	C7	H7A	50.6	60.0
H5	C5	C6	H5A	120.0	120.0
H6	C6	C5	H6A	240.0	240.0
C7	C6	C5	H5	62.8	60.0
C7	C6	C5	H5A	302.8	299.9
C5	C6	C7	H6	120.0	120.0
C5	C6	C7	H6A	240.0	240.0
C6	C7	C8	C9	162.8	180.0
C8	C7	C6	H7	240.0	240.0
C8	C7	C6	H7A	120.0	120.0
C6	C7	C8	H8	282.8	300.0
C6	C7	C8	H8A	42.8	60.0
H6	C6	C7	H6A	120.0	120.0
H7	C7	C6	H7A	240.0	240.0
C8	C7	C6	H6	50.5	60.0
C8	C7	C6	H6A	290.6	300.0
C6	C7	C8	H7	120.0	120.0
C6	C7	C8	H7A	240.0	240.0
C7	C8	C9	C10	90.1	180.0
C9	C8	C7	H8	240.0	240.0
C9	C8	C7	H8A	120.0	120.0
C7	C8	C9	H9	210.1	300.0
C7	C8	C9	H9A	330.1	60.0
H7	C7	C8	H7A	120.0	120.0
H8	C8	C7	H8A	240.0	240.0
C9	C8	C7	H7	42.8	60.0
C9	C8	C7	H7A	282.8	300.0
C7	C8	C9	H8	120.0	120.0
C7	C8	C9	H8A	240.0	240.1
C10	C9	C8	H9	240.0	240.0
C10	C9	C8	H9A	120.0	120.0
C8	C9	C10	H10	180.0	180.0
C8	C9	C10	H10A	300.0	300.0
C8	C9	C10	H10B	60.0	60.0
H8	C8	C9	H8A	120.0	120.0
H9	C9	C8	H9A	240.0	240.0
C10	C9	C8	H8	330.1	60.0
C10	C9	C8	H8A	210.1	300.0
C8	C9	C10	H9	120.0	120.0
C8	C9	C10	H9A	240.0	240.0
H9	C9	C10	H9A	120.0	119.9
H10	C10	C9	H10A	240.0	239.9
H10	C10	C9	H10B	120.0	120.0
H10A	C10	C9	H10B	240.0	240.1
C2	C1	H1	O3	241.1	240.0
H1	C1	C2	C3	179.5	300.0
C2	C1	H1	H1A	120.5	119.9
H1	C1	C2	H2	299.5	60.0
H1	C1	C2	H2A	59.5	180.0
H1	C1	O3	S1	345.8	60.0
O3	C1	H1	H1A	239.4	240.0
C2	C1	H1A	O3	118.9	120.1
H1A	C1	C2	C3	299.5	60.0
C2	C1	H1A	H1	239.4	240.1
H1A	C1	C2	H2	59.5	180.0
H1A	C1	C2	H2A	179.5	299.9
H1A	C1	O3	S1	225.8	300.1
O3	C1	H1A	H1	120.6	120.0
HN1	N1	S1	O1	180.0	353.5
HN1	N1	S1	O2	311.1	126.4
HN1	N1	S1	O3	63.4	240.0
S1	N1	HN1	HN1A	120.0	180.1
HN1A	N1	S1	O1	300.0	173.6
HN1A	N1	S1	O2	71.1	306.5
HN1A	N1	S1	O3	183.4	60.1
S1	N1	HN1A	HN1	240.0	179.9
H2	C2	C1	O3	179.5	300.0
C1	C2	H2	C3	235.4	240.0
H2	C2	C1	H1	299.5	60.0
H2	C2	C1	H1A	59.5	180.0
C1	C2	H2	H2A	117.7	119.9
H2	C2	C3	C4	315.1	60.0
C3	C2	H2	H2A	242.3	240.0
H2	C2	C3	H3	75.1	180.1
H2	C2	C3	H3A	195.1	300.0
H2A	C2	C1	O3	299.5	60.0
C1	C2	H2A	C3	124.6	120.0
H2A	C2	C1	H1	59.5	180.0
H2A	C2	C1	H1A	179.5	299.9
C1	C2	H2A	H2	242.3	240.1
H2A	C2	C3	C4	195.1	300.0
C3	C2	H2A	H2	117.7	120.0
H2A	C2	C3	H3	315.1	60.1
H2A	C2	C3	H3A	75.1	180.0
C2	C3	H3	C4	235.2	239.9
H3	C3	C2	H2	75.1	180.1
H3	C3	C2	H2A	315.1	60.1
C2	C3	H3	H3A	117.6	120.0
H3	C3	C4	C5	61.0	59.9
C4	C3	H3	H3A	242.4	240.1
H3	C3	C4	H4	181.0	180.0
H3	C3	C4	H4A	301.0	299.9
C2	C3	H3A	C4	124.8	120.0
H3A	C3	C2	H2	195.1	300.0
H3A	C3	C2	H2A	75.1	180.0
C2	C3	H3A	H3	242.4	240.0
H3A	C3	C4	C5	301.0	300.0
C4	C3	H3A	H3	117.6	119.9
H3A	C3	C4	H4	61.0	60.1
H3A	C3	C4	H4A	181.0	180.0
C3	C4	H4	C5	237.3	239.9
H4	C4	C3	H3	181.0	180.0
H4	C4	C3	H3A	61.0	60.1
C3	C4	H4	H4A	118.7	119.9
H4	C4	C5	C6	56.6	60.0
C5	C4	H4	H4A	241.4	240.0
H4	C4	C5	H5	176.6	180.0
H4	C4	C5	H5A	296.6	300.0
C3	C4	H4A	C5	122.7	120.0
H4A	C4	C3	H3	301.0	299.9
H4A	C4	C3	H3A	181.0	180.0
C3	C4	H4A	H4	241.3	240.0
H4A	C4	C5	C6	296.7	300.0
C5	C4	H4A	H4	118.6	120.0
H4A	C4	C5	H5	56.7	60.0
H4A	C4	C5	H5A	176.6	180.0
C4	C5	H5	C6	236.1	240.0
H5	C5	C4	H4	176.6	180.0
H5	C5	C4	H4A	56.7	60.0
C4	C5	H5	H5A	118.0	120.0
H5	C5	C6	C7	62.8	60.0
C6	C5	H5	H5A	241.9	240.0
H5	C5	C6	H6	182.9	180.0
H5	C5	C6	H6A	302.9	300.0
C4	C5	H5A	C6	124.0	120.0
H5A	C5	C4	H4	296.6	300.0
H5A	C5	C4	H4A	176.6	180.0
C4	C5	H5A	H5	242.0	240.0
H5A	C5	C6	C7	302.8	299.9
C6	C5	H5A	H5	118.1	120.0
H5A	C5	C6	H6	62.9	60.0
H5A	C5	C6	H6A	182.9	180.0
C5	C6	H6	C7	236.6	240.0
H6	C6	C5	H5	182.9	180.0
H6	C6	C5	H5A	62.9	60.0
C5	C6	H6	H6A	118.3	120.0
H6	C6	C7	C8	50.5	60.0
C7	C6	H6	H6A	241.7	240.0
H6	C6	C7	H7	170.6	180.0
H6	C6	C7	H7A	290.6	300.0
C5	C6	H6A	C7	123.4	120.0
H6A	C6	C5	H5	302.9	300.0
H6A	C6	C5	H5A	182.9	180.0
C5	C6	H6A	H6	241.7	240.0
H6A	C6	C7	C8	290.6	300.0
C7	C6	H6A	H6	118.3	120.0
H6A	C6	C7	H7	50.6	60.0
H6A	C6	C7	H7A	170.6	180.0
C6	C7	H7	C8	236.9	240.0
H7	C7	C6	H6	170.6	180.0
H7	C7	C6	H6A	50.6	60.0
C6	C7	H7	H7A	118.5	120.0
H7	C7	C8	C9	42.8	60.0
C8	C7	H7	H7A	241.5	240.0
H7	C7	C8	H8	162.8	180.0
H7	C7	C8	H8A	282.8	300.0
C6	C7	H7A	C8	123.1	120.0
H7A	C7	C6	H6	290.6	300.0
H7A	C7	C6	H6A	170.6	180.0
C6	C7	H7A	H7	241.5	240.0
H7A	C7	C8	C9	282.8	300.0
C8	C7	H7A	H7	118.5	120.0
H7A	C7	C8	H8	42.8	60.0
H7A	C7	C8	H8A	162.8	180.0
C7	C8	H8	C9	235.9	240.0
H8	C8	C7	H7	162.8	180.0
H8	C8	C7	H7A	42.8	60.0
C7	C8	H8	H8A	117.9	120.0
H8	C8	C9	C10	330.1	60.0
C9	C8	H8	H8A	242.1	240.0
H8	C8	C9	H9	90.1	180.0
H8	C8	C9	H9A	210.1	300.0
C7	C8	H8A	C9	124.1	120.0
H8A	C8	C7	H7	282.8	300.0
H8A	C8	C7	H7A	162.8	180.0
C7	C8	H8A	H8	242.0	240.0
H8A	C8	C9	C10	210.1	300.0
C9	C8	H8A	H8	117.9	120.1
H8A	C8	C9	H9	330.1	60.0
H8A	C8	C9	H9A	90.1	180.0
C8	C9	H9	C10	235.7	240.0
H9	C9	C8	H8	90.1	180.0
H9	C9	C8	H8A	330.1	60.0
C8	C9	H9	H9A	117.9	120.0
C10	C9	H9	H9A	242.1	240.1
H9	C9	C10	H10	60.0	59.9
H9	C9	C10	H10A	180.0	180.0
H9	C9	C10	H10B	300.0	299.9
C8	C9	H9A	C10	124.3	120.0
H9A	C9	C8	H8	210.1	300.0
H9A	C9	C8	H8A	90.1	180.0
C8	C9	H9A	H9	242.1	240.0
C10	C9	H9A	H9	117.9	119.9
H9A	C9	C10	H10	300.0	300.0
H9A	C9	C10	H10A	60.0	60.1
H9A	C9	C10	H10B	180.0	180.0
H10	C10	C9	H9	60.0	59.9
H10	C10	C9	H9A	300.0	300.0
C9	C10	H10	H10A	120.0	120.0
C9	C10	H10	H10B	240.0	240.0
H10A	C10	H10	H10B	120.0	120.0
H10A	C10	C9	H9	180.0	180.0
H10A	C10	C9	H9A	60.0	60.1
C9	C10	H10A	H10	240.0	239.9
C9	C10	H10A	H10B	120.0	119.9
H10	C10	H10A	H10B	240.0	240.0
H10B	C10	C9	H9	300.0	299.9
H10B	C10	C9	H9A	180.0	180.0
C9	C10	H10B	H10	120.0	120.1
C9	C10	H10B	H10A	240.0	240.1
H10	C10	H10B	H10A	120.0	120.0