PDB Chemical Component O3H

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for O3H

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C17	C13	1.392	1.389
C17	C16	1.390	1.381
C13	C14	1.393	1.383
C16	N5	1.401	1.319
C14	C15	1.396	1.391
N5	C15	1.338	1.324
C15	N4	1.344	1.390
N4	C12	1.468	1.469
N4	C9	1.480	1.470
C12	C11	1.532	1.530
C9	C10	1.532	1.531
C11	N3	1.477	1.469
C10	N3	1.499	1.470
N3	C18	1.452	1.469
C18	C19	1.532	1.530
C19	S1	1.814	1.810
C5	C4	1.395	1.366
C5	C6	1.393	1.398
S1	C7	1.727	1.762
N1	C6	1.345	1.348
N1	C7	1.341	1.310
C4	C3	1.396	1.389
C6	C1	1.395	1.413
C7	N2	1.396	1.365
C3	C2	1.392	1.368
C1	C2	1.393	1.394
C1	C8	1.387	1.469
N2	C8	1.385	1.354
C8	O1	1.229	1.217
C2	H21	1.080	1.080
C3	H31	1.080	1.081
C4	H4	1.080	1.080
C5	H5	1.080	1.081
C10	H10	1.100	1.090
C10	H93	1.101	1.090
C11	H94	1.100	1.090
C11	H11	1.100	1.090
C12	H95	1.100	1.090
C12	H12	1.100	1.089
C14	H14	1.080	1.080
C16	H16	1.079	1.079
C18	H18	1.100	1.089
C18	H96	1.100	1.090
C19	H19	1.100	1.089
C19	H97	1.100	1.090
C13	H13	1.080	1.080
C17	H17	1.080	1.080
C9	H92	1.100	1.090
C9	H91	1.100	1.090
N2	H22	1.000	0.970

Bond Angles for O3H

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C17	C13	H13	120.5	120.7
C17	C16	N5	119.8	120.8
C17	C16	H16	120.1	119.6
C13	C14	C15	121.1	119.1
C13	C14	H14	119.4	120.4
C16	N5	C15	121.5	121.6
N5	C16	H16	120.1	119.5
C14	C15	N4	121.7	119.7
C15	C14	H14	119.4	120.5
C15	N4	C9	122.6	111.0
N4	C12	H95	109.2	109.4
N4	C12	H12	109.2	109.5
N4	C9	H92	109.4	109.5
N4	C9	H91	109.4	109.6
C12	C11	N3	113.5	109.4
C12	C11	H94	108.4	109.5
C12	C11	H11	108.5	109.5
C9	C10	N3	113.5	109.4
C9	C10	H10	108.5	109.5
C9	C10	H93	108.5	109.5
C10	N3	C11	97.4	110.9
C11	N3	C18	106.8	111.1
N3	C11	H94	108.5	109.5
N3	C11	H11	108.4	109.5
C10	N3	C18	108.7	111.0
N3	C10	H10	108.4	109.5
N3	C10	H93	108.4	109.5
N3	C18	H18	109.6	109.5
N3	C18	H96	109.6	109.4
C18	C19	S1	111.0	109.4
C19	C18	H18	109.6	109.5
C19	C18	H96	109.6	109.4
C18	C19	H19	109.1	109.5
C18	C19	H97	109.1	109.5
S1	C19	H19	109.1	109.5
S1	C19	H97	109.1	109.4
C5	C4	H4	120.0	119.6
C5	C6	C1	119.6	119.2
C6	C5	H5	119.9	120.1
N1	C7	N2	120.6	123.1
C4	C3	H31	120.0	119.6
C6	C1	C8	119.9	118.2
C7	N2	C8	119.8	120.5
C7	N2	H22	120.1	119.8
C3	C2	H21	120.1	120.2
C1	C2	H21	120.1	120.3
C1	C8	O1	121.5	121.3
N2	C8	O1	120.1	121.2
H10	C10	H93	109.5	109.5
H94	C11	H11	109.5	109.5
H95	C12	H12	109.5	109.5
H18	C18	H96	109.4	109.5
H19	C19	H97	109.5	109.5
H92	C9	H91	109.5	109.5

Torsion Angles for O3H

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C13	C17	C16	N5	360.0	0.2
C13	C17	C16	H16	180.0	179.7
C17	C13	C14	H14	176.7	179.7
C17	C16	N5	C15	1.2	359.5
N5	C16	C17	H16	180.0	180.5
C13	C14	C15	N4	180.1	179.7
C15	C14	C13	H14	180.0	180.3
C17	C16	N5	H16	180.0	179.5
C13	C14	C15	H14	180.0	179.7
C16	N5	C15	C14	356.6	0.5
C14	C15	N4	C9	183.9	56.2
C15	N5	C16	H16	181.2	180.0
N5	C15	C14	H14	184.4	180.0
C16	N5	C15	N4	180.9	180.5
N4	C15	C14	H14	0.1	0.0
C15	N4	C12	H95	262.0	56.9
C15	N4	C12	H12	21.6	296.9
C15	N4	C9	H92	338.4	63.2
C15	N4	C9	H91	98.3	303.1
N4	C12	C11	H94	179.7	178.4
N4	C12	C11	H11	298.5	298.5
H95	C12	N4	H12	240.3	120.0
C9	N4	C12	H95	78.3	180.7
C9	N4	C12	H12	198.0	60.7
N4	C9	C10	H10	61.3	61.6
N4	C9	C10	H93	180.1	181.6
H92	C9	N4	H91	240.1	120.1
C10	N3	C11	C12	291.3	300.7
C12	C11	N3	C18	179.2	176.8
N3	C11	C12	H94	239.4	240.0
N3	C11	C12	H11	120.6	120.0
H94	C11	C12	H11	241.2	239.9
C9	C10	N3	C11	69.4	59.3
C9	C10	N3	C18	180.0	183.2
N3	C10	C9	H10	239.4	240.0
N3	C10	C9	H93	120.6	120.0
H10	C10	C9	H93	241.2	240.0
C12	C11	N3	H94	120.6	120.0
C12	C11	N3	H11	239.4	240.0
C10	N3	C11	C18	112.1	123.9
C11	N3	C10	H10	308.8	299.4
C11	N3	C10	H93	190.0	179.3
C11	N3	C18	H18	44.4	173.8
C11	N3	C18	H96	164.4	53.7
H94	C11	N3	H11	118.8	120.1
C12	C11	N3	C10	291.3	300.7
C9	C10	N3	H10	120.6	119.9
C9	C10	N3	H93	239.4	240.1
C11	N3	C10	C18	249.4	236.1
C10	N3	C11	H94	170.7	180.7
C10	N3	C11	H11	51.9	60.7
C10	N3	C18	H18	300.2	50.0
C10	N3	C18	H96	60.3	289.9
H10	C10	N3	H93	118.8	120.1
C10	N3	C18	C11	255.8	236.2
C18	N3	C11	H94	58.6	56.9
C18	N3	C11	H11	299.8	296.8
C18	N3	C10	H10	59.4	63.3
C18	N3	C10	H93	300.6	303.2
N3	C18	C19	S1	301.0	179.9
C19	C18	N3	H18	240.0	120.0
C19	C18	N3	H96	120.0	240.1
N3	C18	C19	H19	61.2	299.9
N3	C18	C19	H97	180.8	60.0
H18	C18	N3	H96	239.9	120.1
C11	N3	C18	C19	284.4	293.8
C10	N3	C18	C19	180.2	170.0
N3	C18	C19	H18	120.0	240.0
N3	C18	C19	H96	240.0	119.9
S1	C19	C18	H19	239.8	240.0
S1	C19	C18	H97	120.2	119.9
H18	C18	C19	H96	120.1	239.9
H19	C19	C18	H97	240.4	239.9
S1	C19	C18	H18	181.1	299.9
S1	C19	C18	H96	61.0	60.0
C18	C19	S1	H19	120.2	120.0
C18	C19	S1	H97	239.8	240.0
H19	C19	S1	H97	119.6	120.1
C5	C4	C3	H31	180.1	180.0
C6	C5	C4	H4	179.9	180.1
C5	C6	C1	C8	179.9	180.0
S1	C7	N2	H22	0.0	0.3
N1	C6	C5	H5	0.0	0.1
N1	C7	N2	C8	0.8	359.7
N1	C7	N2	H22	180.8	180.0
C4	C3	C2	H21	180.0	180.0
C1	C6	C5	H5	180.2	179.8
C6	C1	C2	H21	180.1	179.7
C6	C1	C8	O1	180.0	180.0
C7	N2	C8	O1	179.6	180.2
C1	C2	C3	H21	180.0	180.3
C3	C2	C1	H21	180.0	179.7
C7	N2	C8	C1	359.5	0.3
C8	C1	C2	H21	0.0	0.3
N2	C8	C1	O1	180.1	180.0
C7	N2	C8	H22	180.0	180.3
C1	C8	N2	O1	179.9	180.0
H31	C3	C2	H21	360.0	0.0
H4	C4	C3	H31	0.1	359.9
H5	C5	C4	H4	359.8	360.0
H5	C5	C6	C1	180.2	179.8
C9	C10	H10	N3	236.3	240.1
C9	C10	H10	H93	118.2	120.0
H10	C10	N3	C11	308.8	299.4
H10	C10	N3	C18	59.4	63.3
N3	C10	H10	H93	241.9	239.9
C9	C10	H93	N3	123.7	119.9
C9	C10	H93	H10	241.8	240.0
H93	C10	N3	C11	190.0	179.3
H93	C10	N3	C18	300.6	303.2
N3	C10	H93	H10	118.1	120.1
C12	C11	H94	N3	236.3	240.1
C12	C11	H94	H11	118.1	120.1
H94	C11	N3	C18	58.6	56.9
N3	C11	H94	H11	241.9	240.0
C12	C11	H11	N3	123.7	119.9
C12	C11	H11	H94	241.9	239.9
H11	C11	N3	C18	299.8	296.8
N3	C11	H11	H94	118.2	120.0
N4	C12	H95	H12	119.5	240.0
H95	C12	C11	N3	298.9	178.4
H95	C12	C11	H94	59.5	298.3
H95	C12	C11	H11	178.3	58.4
N4	C12	H12	H95	240.5	120.0
H12	C12	C11	N3	179.2	298.4
H12	C12	C11	H94	299.8	58.4
H12	C12	C11	H11	58.6	178.5
C13	C14	H14	C15	180.0	180.3
H14	C14	C15	N4	0.1	0.0
C17	C16	H16	N5	180.0	180.5
H16	C16	N5	C15	181.2	180.0
N3	C18	H18	H96	120.2	240.0
H18	C18	C19	S1	181.1	299.9
C19	C18	H18	H96	239.8	120.0
H18	C18	C19	H19	301.3	59.9
H18	C18	C19	H97	60.9	180.0
N3	C18	H96	H18	239.8	120.0
H96	C18	C19	S1	61.0	60.0
C19	C18	H96	H18	120.2	239.9
H96	C18	C19	H19	181.2	180.0
H96	C18	C19	H97	300.8	300.1
C18	C19	H19	S1	238.6	240.1
H19	C19	C18	H18	301.3	59.9
H19	C19	C18	H96	181.2	180.0
C18	C19	H19	H97	119.3	120.1
S1	C19	H19	H97	240.7	240.0
C18	C19	H97	S1	121.4	119.9
H97	C19	C18	H18	60.9	180.0
H97	C19	C18	H96	300.8	300.1
C18	C19	H97	H19	240.7	240.0
S1	C19	H97	H19	119.3	120.0
H13	C13	C14	C15	176.7	180.0
H13	C13	C14	H14	356.7	359.7
H17	C17	C13	H13	1.1	0.0
H17	C17	C16	N5	179.9	180.2
H17	C17	C16	H16	360.0	359.7
N4	C9	H92	H91	119.9	239.8
H92	C9	C10	N3	180.7	61.6
H92	C9	C10	H10	301.3	181.6
H92	C9	C10	H93	60.1	301.6
N4	C9	H91	H92	240.1	120.1
H91	C9	C10	N3	60.7	181.6
H91	C9	C10	H10	181.3	301.6
H91	C9	C10	H93	300.1	61.6
C7	N2	H22	C8	180.0	179.7
H22	N2	C8	O1	359.6	359.9