PDB Chemical Component O37

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for O37

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CBH CBI 1.376 1.501
CBH CBG 1.375 1.294
CBI CBJ 1.384 1.531
CBG CBF 1.398 1.501
CBJ CBE 1.358 1.534
CBE CBF 1.423 1.530
CBE NBA 1.260 1.465
NBB CBC 1.330 1.312
NBB NBA 1.346 1.405
CBD CBC 1.521 1.507
CBC CAY 1.310 1.387
NBA CAZ 1.317 1.342
CAZ CAY 1.337 1.369
CAZ NAC 1.358 1.394
CAY CB 1.467 1.507
CAA CAB 1.509 1.530
CAB NAC 1.486 1.465
NAC C 1.345 1.350
CG CB 1.407 1.507
CG CD2 1.380 1.383
CG CD1 1.408 1.382
CB CA 1.549 1.533
CD2 CE2 1.390 1.382
CE2 CZ 1.387 1.384
CD1 CE1 1.393 1.382
CZ CE1 1.384 1.384
CZ FAV 1.331 1.352
C CA 1.385 1.502
C O 1.238 1.213
CA N 1.492 1.465
OAI CAH 1.224 1.216
N CAH 1.337 1.348
CAH CAJ 1.400 1.479
CAJ CAK 1.394 1.396
CAJ CAO 1.399 1.395
CAK CAL 1.392 1.380
CAO CAN 1.394 1.380
CAL CAP 1.393 1.506
CAL CAM 1.390 1.383
CAN CAM 1.386 1.384
N H 1.000 0.970
CA HA 1.100 1.090
CB HB 1.100 1.090
CD1 HD1 1.080 1.080
CD2 HD2 1.080 1.080
CE1 HE1 1.080 1.080
CE2 HE2 1.080 1.080
CAA HAC 1.100 1.090
CAA HAA 1.100 1.090
CAA HAB 1.100 1.090
CAB HAD 1.100 1.090
CAB HAE 1.100 1.089
CAK HAK 1.080 1.080
CAM HAM 1.080 1.080
CAN HAN 1.080 1.081
CAO HAO 1.080 1.080
CAP HAR 1.100 1.091
CAP HAP 1.100 1.090
CAP HAQ 1.100 1.089
CBD HBD 1.100 1.091
CBD HE3 1.100 1.090
CBD HE4 1.100 1.090
CBE H2 1.101 1.090
CBF HBF 1.100 1.090
CBF H3 1.100 1.090
CBG HBG 1.080 1.080
CBH HBH 1.080 1.080
CBI HBI 1.100 1.090
CBI H4 1.100 1.090
CBJ HBJ 1.100 1.091
CBJ H5 1.100 1.090

Bond Angles for O37

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CBH CBI CBJ 118.1 110.1
CBI CBH HBH 120.8 118.0
CBH CBI HBI 107.2 109.4
CBH CBI H4 107.3 109.3
CBH CBG HBG 120.5 117.9
CBJ CBI HBI 107.3 109.3
CBJ CBI H4 107.3 109.4
CBI CBJ HBJ 105.3 109.6
CBI CBJ H5 105.3 109.7
CBG CBF HBF 105.9 109.4
CBG CBF H3 105.9 109.2
CBJ CBE NBA 129.0 109.6
CBJ CBE H2 104.3 109.9
CBF CBE NBA 102.9 109.6
CBF CBE H2 103.6 109.7
CBE CBF HBF 105.9 109.4
CBE CBF H3 105.9 109.4
NBA CBE H2 105.4 109.6
CAB NAC CAZ 122.7 120.9
CAY CB HB 109.8 109.7
CAA CAB NAC 109.4 109.4
CAB CAA HAC 109.5 109.5
CAB CAA HAA 109.5 109.5
CAB CAA HAB 109.4 109.4
CAA CAB HAD 109.5 109.5
CAA CAB HAE 109.5 109.5
NAC CAB HAD 109.5 109.4
NAC CAB HAE 109.5 109.5
CG CB HB 110.7 109.7
CD1 CG CD2 118.3 120.1
CG CD2 CE2 120.9 120.0
CG CD2 HD2 119.5 120.0
CG CD1 CE1 120.7 120.0
CG CD1 HD1 119.7 120.0
CB CA HA 99.5 109.1
CD2 CE2 CZ 120.4 119.9
CE2 CD2 HD2 119.5 120.0
CD2 CE2 HE2 119.8 120.0
CE2 CZ FAV 119.7 120.0
CZ CE2 HE2 119.8 120.0
CE1 CD1 HD1 119.7 120.0
CD1 CE1 HE1 120.1 120.0
CZ CE1 HE1 120.1 120.0
C CA HA 100.6 109.1
CA N CAH 127.0 120.0
CA N H 116.5 120.0
N CAH CAJ 116.0 119.9
CAH N H 116.5 120.0
CAH CAJ CAK 124.4 120.1
CAH CAJ CAO 116.6 120.2
CAK CAJ CAO 117.2 119.7
CAJ CAK CAL 121.3 119.8
CAJ CAK HAK 119.3 120.1
CAJ CAO CAN 120.7 119.8
CAJ CAO HAO 119.6 120.1
CAK CAL CAP 119.9 119.9
CAK CAL CAM 120.5 120.1
CAL CAK HAK 119.4 120.1
CAO CAN HAN 119.4 119.9
CAM CAL CAP 119.5 119.9
CAL CAP HAR 109.5 109.5
CAL CAP HAP 109.4 109.5
CAL CAP HAQ 109.5 109.5
CAL CAM HAM 120.8 119.9
CAN CAM HAM 120.8 119.8
HAC CAA HAA 109.5 109.5
HAC CAA HAB 109.5 109.5
HAA CAA HAB 109.5 109.4
HAD CAB HAE 109.5 109.5
HAR CAP HAP 109.5 109.5
HAR CAP HAQ 109.5 109.5
HAP CAP HAQ 109.5 109.5
HBD CBD HE3 109.4 109.4
HBD CBD HE4 109.5 109.4
HE3 CBD HE4 109.5 109.5
HBF CBF H3 109.5 109.4
HBI CBI H4 109.5 109.3
HBJ CBJ H5 109.5 109.9

Torsion Angles for O37

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CBI CBH CBG HBG 180.0 179.5
CBJ CBI CBH HBI 238.8 239.9
CBJ CBI CBH H4 121.2 120.2
CBH CBI CBJ HBJ 98.9 190.9
CBH CBI CBJ H5 214.6 70.2
HBI CBI CBH H4 242.5 240.3
CBH CBG CBF HBF 131.8 256.9
CBH CBG CBF H3 248.0 137.3
CBJ CBI CBH HBH 185.5 197.1
CBH CBI CBJ HBI 121.2 120.2
CBH CBI CBJ H4 238.7 239.8
CBI CBJ CBE NBA 156.0 187.2
CBI CBJ CBE H2 280.0 307.7
HBI CBI CBJ H4 117.5 119.7
HBJ CBJ CBI H5 244.3 120.7
CBG CBF CBE NBA 197.2 190.9
CBG CBF CBE H2 87.5 70.5
CBE CBF CBG HBF 238.1 120.2
CBE CBF CBG H3 121.9 239.9
HBF CBF CBG H3 243.8 119.7
CBF CBE CBJ NBA 234.3 240.4
CBF CBE CBJ H2 110.2 119.8
CBJ CBE CBF HBF 214.9 70.7
CBJ CBE CBF H3 98.7 190.5
NBA CBE CBJ H2 235.9 239.5
CBG CBF CBE HBF 121.9 239.8
CBG CBF CBE H3 238.1 120.0
CBJ CBE CBF NBA 139.7 119.7
CBJ CBE CBF H2 249.3 240.0
NBA CBE CBF H2 109.7 120.4
HBF CBF CBE H3 116.2 240.2
CBJ CBE NBA H2 123.6 120.7
CBF CBE NBA H2 251.7 239.6
NBA CBE CBF HBF 75.3 311.1
NBA CBE CBF H3 319.1 70.8
NBB NBA CBE H2 355.7 198.5
CBC CAY CB HB 44.7 31.9
CAB NAC CAZ CAY 185.4 190.2
CAZ CAY CB HB 208.9 211.8
CAA CAB NAC CAZ 81.9 264.3
CAZ NAC CAB HAD 321.9 144.3
CAZ NAC CAB HAE 201.9 24.3
CG CB CAY HB 237.6 239.4
CAY CB CA HA 284.6 283.3
NAC CAB CAA HAD 240.0 240.1
NAC CAB CAA HAE 120.0 120.0
HAC CAA CAB HAA 240.0 239.9
HAC CAA CAB HAB 120.0 120.0
HAA CAA CAB HAB 240.0 240.0
HAD CAB CAA HAE 240.0 239.9
NAC CAB CAA HAC 180.0 300.0
NAC CAB CAA HAA 300.0 60.1
NAC CAB CAA HAB 60.0 180.0
CAA CAB NAC HAD 120.0 120.0
CAA CAB NAC HAE 240.0 240.0
HAD CAB NAC HAE 120.0 120.0
NAC C CA HA 88.7 81.6
CAY CB CG HB 121.9 120.6
CG CB CA HA 164.7 163.6
CD2 CG CB HB 171.1 0.5
CD2 CG CD1 CE1 4.8 0.3
CD2 CG CD1 HD1 184.8 180.2
CG CD2 CE2 CZ 2.5 359.9
CE2 CD2 CG HD2 180.0 180.1
CG CD2 CE2 HE2 182.5 180.0
CD1 CG CB HB 358.9 180.8
CD1 CG CD2 CE2 355.5 359.8
CD1 CG CD2 HD2 175.5 179.7
CE1 CD1 CG HD1 180.0 180.1
CG CD1 CE1 HE1 177.0 179.9
C CA CB HA 108.0 120.5
CB CA N CAH 58.7 154.2
CB CA N H 238.7 333.8
CG CD2 CE2 HD2 180.0 179.9
CD2 CE2 CZ FAV 180.5 180.0
CZ CE2 CD2 HE2 180.0 179.9
CZ CE2 CD2 HD2 182.5 180.0
CD2 CE2 CZ HE2 180.0 180.1
CE2 CZ CE1 HE1 180.8 179.7
CE1 CD1 CG CD2 4.8 0.3
CG CD1 CE1 HD1 180.0 179.9
CZ CE1 CD1 HE1 180.0 180.1
CD2 CE2 CZ CE1 359.5 0.4
CZ CE1 CD1 HD1 177.0 180.0
CD1 CE1 CZ HE1 180.0 179.9
FAV CZ CE2 HE2 0.5 359.9
FAV CZ CE1 HE1 359.8 0.1
CB CA C HA 252.6 239.6
C CA N CAH 206.2 275.9
C CA N H 26.2 95.5
O C CA HA 260.0 261.7
CA N CAH CAJ 180.0 179.7
CAH N CA H 180.0 180.3
OAI CAH N H 167.8 180.0
CA N CAH H 180.0 179.7
N CAH CAJ CAK 12.4 180.0
N CAH CAJ CAO 208.0 359.7
CAJ CAH N H 360.0 0.0
CAK CAJ CAH CAO 164.4 180.3
CAH CAJ CAK CAL 185.2 179.9
CAH CAJ CAK HAK 5.2 360.0
CAH CAJ CAO CAN 174.3 179.7
CAH CAJ CAO HAO 354.3 0.0
CAH CAJ CAK CAO 195.7 179.7
CAK CAJ CAO CAN 8.8 359.4
CAK CAJ CAO HAO 188.8 179.8
CAJ CAK CAL CAP 185.2 180.0
CAJ CAK CAL CAM 7.7 0.1
CAL CAK CAJ HAK 180.0 180.0
CAH CAJ CAO CAK 165.5 180.3
CAO CAJ CAK CAL 349.5 0.2
CAO CAJ CAK HAK 169.5 180.3
CAJ CAO CAN HAN 175.8 180.3
CAL CAK CAJ CAO 349.5 0.2
CAJ CAK CAL HAK 180.0 180.0
CAM CAL CAK CAP 182.6 180.1
CAK CAL CAP HAR 91.3 90.0
CAK CAL CAP HAP 211.3 210.0
CAK CAL CAP HAQ 331.3 330.0
CAK CAL CAM HAM 177.3 179.9
CAJ CAO CAN HAO 180.0 180.3
CAO CAN CAM HAM 181.0 179.7
CAK CAL CAP CAM 182.5 180.1
CAP CAL CAK HAK 5.2 359.9
CAP CAL CAM HAM 359.9 0.0
HAR CAP CAL HAP 240.0 240.0
HAR CAP CAL HAQ 120.0 120.0
HAP CAP CAL HAQ 240.0 240.0
CAK CAL CAM CAP 177.5 179.9
CAM CAL CAK HAK 187.7 180.0
CAM CAL CAP HAR 268.7 269.9
CAM CAL CAP HAP 28.8 29.9
CAM CAL CAP HAQ 148.8 149.9
CAN CAM CAL HAM 180.0 180.0
CAJ CAO CAN CAM 355.8 0.6
CAN CAM CAL CAP 179.8 180.0
CAL CAM CAN HAM 180.0 180.0
CA N H CAH 180.0 180.3
H N CAH CAJ 360.0 0.0
HA CA N CAH 313.2 35.0
HA CA N H 133.1 214.7
HB CB CA HA 42.3 43.1
HD1 CD1 CG CD2 184.8 180.2
CG CD1 HD1 CE1 180.0 180.1
HD1 CD1 CE1 HE1 357.0 360.0
CG CD2 HD2 CE2 180.0 180.1
HD2 CD2 CE2 CZ 182.5 180.0
HD2 CD2 CE2 HE2 2.5 0.1
HE1 CE1 CD1 HD1 357.0 360.0
CD2 CE2 HE2 CZ 180.0 179.9
HE2 CE2 CD2 HD2 2.5 0.1
HE2 CE2 CZ FAV 0.5 359.9
HAC CAA CAB NAC 180.0 300.0
CAB CAA HAC HAA 120.0 120.1
CAB CAA HAC HAB 240.0 240.1
HAC CAA CAB HAD 300.0 59.9
HAC CAA CAB HAE 60.0 180.0
HAA CAA HAC HAB 120.0 120.0
HAA CAA CAB NAC 300.0 60.1
CAB CAA HAA HAC 240.0 240.0
CAB CAA HAA HAB 120.0 120.0
HAA CAA CAB HAD 60.0 180.0
HAA CAA CAB HAE 180.0 300.1
HAC CAA HAA HAB 240.0 240.0
HAB CAA CAB NAC 60.0 180.0
CAB CAA HAB HAC 120.0 120.0
CAB CAA HAB HAA 240.0 240.0
HAB CAA CAB HAD 180.0 300.0
HAB CAA CAB HAE 300.0 60.0
HAC CAA HAB HAA 120.0 120.0
HAD CAB NAC CAZ 321.9 144.3
CAA CAB HAD NAC 240.0 240.1
HAD CAB CAA HAC 300.0 59.9
HAD CAB CAA HAA 60.0 180.0
HAD CAB CAA HAB 180.0 300.0
CAA CAB HAD HAE 120.0 120.1
NAC CAB HAD HAE 240.0 240.0
HAE CAB NAC CAZ 201.9 24.3
CAA CAB HAE NAC 120.0 120.0
HAE CAB CAA HAC 60.0 180.0
HAE CAB CAA HAA 180.0 300.1
HAE CAB CAA HAB 300.0 60.0
CAA CAB HAE HAD 240.0 239.9
NAC CAB HAE HAD 120.0 120.0
HAK CAK CAJ CAO 169.5 180.3
CAJ CAK HAK CAL 180.0 180.0
HAK CAK CAL CAP 5.2 359.9
HAK CAK CAL CAM 187.7 180.0
HAM CAM CAL CAP 359.9 0.0
HAN CAN CAM HAM 1.0 0.1
CAJ CAO HAO CAN 180.0 179.7
HAO CAO CAN HAN 355.8 359.9
CAL CAP HAR HAP 120.0 120.0
CAL CAP HAR HAQ 240.0 240.0
HAP CAP HAR HAQ 120.0 120.0
CAL CAP HAP HAR 240.0 240.0
CAL CAP HAP HAQ 120.0 120.0
HAR CAP HAP HAQ 240.0 240.0
CAL CAP HAQ HAR 120.0 120.0
CAL CAP HAQ HAP 240.0 240.0
HAR CAP HAQ HAP 120.0 120.0
HE3 CBD HBD HE4 120.0 120.0
HBD CBD HE3 HE4 240.0 240.1
HBD CBD HE4 HE3 120.0 120.0
CBJ CBE H2 NBA 221.9 239.5
CBF CBE H2 NBA 107.8 120.4
H2 CBE CBF HBF 325.6 190.7
H2 CBE CBF H3 209.4 310.5
CBG CBF HBF H3 113.7 240.4
HBF CBF CBE NBA 75.3 311.1
HBF CBF CBE H2 325.6 190.7
CBE CBF HBF H3 246.3 119.8
CBG CBF H3 HBF 246.3 119.7
H3 CBF CBE NBA 319.1 70.8
H3 CBF CBE H2 209.4 310.5
CBE CBF H3 HBF 113.7 240.2
HBG CBG CBF HBF 311.8 76.9
HBG CBG CBF H3 68.0 317.2
HBH CBH CBI CBJ 185.5 197.1
HBH CBH CBI HBI 306.8 317.3
HBH CBH CBI H4 64.3 77.0
HBH CBH CBG HBG 0.0 359.6
CBH CBI HBI CBJ 232.2 239.4
HBI CBI CBH HBH 306.8 317.3
CBH CBI HBI H4 116.1 119.7
CBJ CBI HBI H4 243.9 240.3
HBI CBI CBJ HBJ 337.7 70.7
HBI CBI CBJ H5 93.4 310.0
CBH CBI H4 CBJ 127.8 120.6
H4 CBI CBH HBH 64.3 77.0
CBH CBI H4 HBI 243.9 240.3
CBJ CBI H4 HBI 116.1 119.7
H4 CBI CBJ HBJ 220.2 311.1
H4 CBI CBJ H5 335.9 190.4
HBJ CBJ CBI HBI 337.7 70.7
HBJ CBJ CBI H4 220.2 311.1
CBI CBJ HBJ H5 112.8 239.4
HBJ CBJ CBE NBA 33.8 306.8
HBJ CBJ CBE H2 157.9 67.3
H5 CBJ CBI HBI 93.4 310.0
H5 CBJ CBI H4 335.9 190.4
CBI CBJ H5 HBJ 247.2 120.5
H5 CBJ CBE NBA 278.1 67.5
H5 CBJ CBE H2 42.2 188.0