PDB Chemical Component O18

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for O18

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.453 1.469
O C 1.228 1.208
CA C 1.528 1.506
CA CB 1.520 1.530
CB OG 1.446 1.452
OG C1 1.335 1.343
O11 C1 1.201 1.208
C1 C2 1.500 1.507
C2 C3 1.523 1.530
C3 C4 1.521 1.530
C4 C5 1.520 1.530
C5 C6 1.521 1.530
C6 C7 1.520 1.530
C7 C8 1.526 1.530
C9 C8 1.497 1.507
C9 C10 1.319 1.310
C10 C11 1.498 1.507
C11 C12 1.528 1.530
C12 C13 1.522 1.530
C15 C16 1.513 1.530
C15 C14 1.516 1.530
C13 C14 1.522 1.531
CA HA 1.100 1.089
CB HB3 1.100 1.090
CB HB2 1.100 1.090
C2 H4 1.100 1.090
C2 H5 1.100 1.090
C3 H6 1.100 1.090
C3 H7 1.100 1.090
C4 H8 1.100 1.090
C4 H9 1.100 1.090
C5 H10 1.100 1.089
C5 H11 1.100 1.090
C6 H12 1.100 1.091
C6 H13 1.100 1.089
C7 H14 1.101 1.090
C7 H15 1.100 1.090
C8 H16 1.100 1.090
C8 H17 1.100 1.089
C9 H18 1.080 1.080
C10 H19 1.080 1.080
C11 H20 1.100 1.089
C11 H21 1.100 1.091
C12 H22 1.100 1.090
C12 H23 1.100 1.090
C13 H24 1.100 1.090
C13 H25 1.100 1.090
C14 H26 1.100 1.090
C14 H27 1.100 1.090
C15 H28 1.100 1.090
C15 H29 1.100 1.091
C16 H30 1.100 1.089
C16 H31 1.100 1.091
C16 H32 1.100 1.090
N H 1.000 1.009
N H2 1.000 1.008
C OXT   1.342
OXT HXT   0.967

Bond Angles for O18

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N CA HA 110.9 109.5
O C OXT   120.0
CB CA C 102.8 109.5
C CA HA 109.9 109.5
CA C OXT   120.0
CA CB OG 108.9 109.5
CB CA HA 109.9 109.5
CA CB HB3 109.6 109.5
CA CB HB2 109.6 109.4
CB OG C1 116.7 117.0
OG CB HB3 109.6 109.5
OG CB HB2 109.6 109.5
C1 C2 C3 113.7 109.5
C1 C2 H4 108.4 109.5
C1 C2 H5 108.4 109.5
C2 C3 C4 112.5 109.5
C3 C2 H4 108.4 109.5
C3 C2 H5 108.4 109.5
C2 C3 H6 108.7 109.5
C2 C3 H7 108.7 109.5
C3 C4 C5 114.3 109.5
C4 C3 H6 108.7 109.5
C4 C3 H7 108.7 109.4
C3 C4 H8 108.2 109.5
C3 C4 H9 108.3 109.4
C4 C5 C6 113.7 109.5
C5 C4 H8 108.3 109.5
C5 C4 H9 108.2 109.5
C4 C5 H10 108.4 109.5
C4 C5 H11 108.4 109.4
C5 C6 C7 114.1 109.5
C6 C5 H10 108.4 109.5
C6 C5 H11 108.4 109.5
C5 C6 H12 108.3 109.5
C5 C6 H13 108.3 109.5
C6 C7 C8 114.1 109.5
C7 C6 H12 108.3 109.4
C7 C6 H13 108.3 109.5
C6 C7 H14 108.3 109.4
C6 C7 H15 108.3 109.5
C8 C7 H14 108.3 109.5
C8 C7 H15 108.3 109.5
C7 C8 H16 108.5 109.4
C7 C8 H17 108.5 109.5
C9 C8 H16 108.5 109.4
C9 C8 H17 108.5 109.5
C9 C10 C11 126.2 120.0
C10 C9 H18 116.9 120.0
C9 C10 H19 116.9 120.0
C10 C11 C12 113.2 109.5
C11 C10 H19 116.9 120.0
C10 C11 H20 108.5 109.5
C10 C11 H21 108.5 109.4
C11 C12 C13 113.8 109.5
C12 C11 H20 108.5 109.5
C12 C11 H21 108.5 109.5
C11 C12 H22 108.4 109.5
C11 C12 H23 108.4 109.4
C12 C13 C14 114.2 109.5
C13 C12 H22 108.4 109.5
C13 C12 H23 108.4 109.5
C12 C13 H24 108.2 109.5
C12 C13 H25 108.3 109.5
C16 C15 H28 108.6 109.5
C16 C15 H29 108.5 109.5
C15 C16 H30 109.5 109.5
C15 C16 H31 109.5 109.5
C15 C16 H32 109.5 109.5
C15 C14 H26 108.2 109.5
C15 C14 H27 108.2 109.5
C14 C13 H24 108.3 109.5
C14 C13 H25 108.2 109.4
C13 C14 H26 108.2 109.4
C13 C14 H27 108.2 109.4
HB3 CB HB2 109.5 109.4
H4 C2 H5 109.5 109.4
H6 C3 H7 109.5 109.4
H8 C4 H9 109.5 109.4
H10 C5 H11 109.5 109.5
H12 C6 H13 109.5 109.5
H14 C7 H15 109.5 109.4
H16 C8 H17 109.4 109.5
H20 C11 H21 109.5 109.4
H22 C12 H23 109.5 109.5
H24 C13 H25 109.5 109.5
H26 C14 H27 109.5 109.5
H28 C15 H29 109.5 109.5
H30 C16 H31 109.5 109.5
H30 C16 H32 109.5 109.5
H31 C16 H32 109.5 109.5
H N H2 109.5 111.0
C OXT HXT   117.0

Torsion Angles for O18

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C CA N HA 237.4 239.9
N CA C OXT   160.0
N CA CB OG 49.7 295.0
CB CA N HA 123.1 120.0
N CA CB HB3 169.6 55.0
N CA CB HB2 289.8 175.0
O C CA HA 347.2 220.0
CA C O OXT   180.0
O C OXT HXT   360.0
N CA C HA 123.2 120.0
O C CA OXT   180.0
C CA CB OG 290.2 175.0
CB CA C HA 243.0 240.0
C CA CB HB3 50.1 295.1
C CA CB HB2 170.3 55.0
CA C OXT HXT   180.0
N CA CB HA 236.4 240.0
C CA CB HA 116.9 120.1
CB CA C OXT   279.9
CA CB OG C1 213.4 180.1
OG CB CA HB3 240.1 240.0
OG CB CA HB2 119.9 120.0
HB3 CB CA HB2 239.8 240.0
OG CB CA C 290.2 175.0
OG CB CA HA 173.3 55.0
CA CB OG HB3 119.9 120.1
CA CB OG HB2 240.1 240.0
HB3 CB OG HB2 120.2 120.0
C1 OG CB HB3 93.5 60.0
C1 OG CB HB2 333.4 300.0
OG C1 C2 H4 167.7 300.0
OG C1 C2 H5 286.5 59.9
O11 C1 C2 H4 347.8 120.0
O11 C1 C2 H5 106.5 240.0
CB OG C1 C2 180.6 180.0
C1 C2 C3 C4 169.5 180.0
C3 C2 C1 H4 239.4 240.0
C3 C2 C1 H5 120.6 120.0
C1 C2 C3 H6 290.0 300.0
C1 C2 C3 H7 49.1 60.0
H4 C2 C1 H5 241.2 240.0
C1 C2 C3 H4 120.6 120.0
C1 C2 C3 H5 239.4 240.0
C2 C3 C4 C5 186.2 180.0
C4 C3 C2 H6 239.5 240.0
C4 C3 C2 H7 120.4 120.0
C2 C3 C4 H8 306.9 300.1
C2 C3 C4 H9 65.5 60.0
H4 C2 C3 H5 118.8 120.0
H6 C3 C2 H7 240.9 240.0
C4 C3 C2 H4 48.9 60.0
C4 C3 C2 H5 290.2 300.0
C2 C3 C4 H6 120.5 120.1
C2 C3 C4 H7 239.6 240.0
C3 C4 C5 C6 173.2 180.0
C5 C4 C3 H8 239.3 239.9
C5 C4 C3 H9 120.7 120.0
C3 C4 C5 H10 293.8 300.0
C3 C4 C5 H11 52.6 60.1
H6 C3 C4 H7 119.1 120.0
H8 C4 C3 H9 241.4 240.0
C5 C4 C3 H6 65.7 59.9
C5 C4 C3 H7 306.6 300.0
C3 C4 C5 H8 120.7 120.1
C3 C4 C5 H9 239.3 240.0
C4 C5 C6 C7 299.4 180.1
C6 C5 C4 H10 239.4 240.0
C6 C5 C4 H11 120.6 120.0
C4 C5 C6 H12 60.1 300.0
C4 C5 C6 H13 178.7 60.0
H8 C4 C5 H9 118.6 120.0
H10 C5 C4 H11 241.3 240.0
C6 C5 C4 H8 52.5 60.0
C6 C5 C4 H9 293.9 300.0
C4 C5 C6 H10 120.7 120.0
C4 C5 C6 H11 239.4 240.1
C5 C6 C7 C8 178.5 180.0
C7 C6 C5 H12 239.3 240.1
C7 C6 C5 H13 120.7 120.0
C5 C6 C7 H14 299.2 300.0
C5 C6 C7 H15 57.8 60.0
H10 C5 C6 H11 118.7 120.1
H12 C6 C5 H13 241.4 240.0
C7 C6 C5 H10 178.7 60.0
C7 C6 C5 H11 60.0 300.0
C5 C6 C7 H12 120.7 120.0
C5 C6 C7 H13 239.3 240.0
C8 C7 C6 H14 239.3 240.0
C8 C7 C6 H15 120.7 120.0
C6 C7 C8 H16 55.8 299.9
C6 C7 C8 H17 174.6 60.0
H12 C6 C7 H13 118.7 120.0
H14 C7 C6 H15 241.4 240.1
C8 C7 C6 H12 57.8 60.0
C8 C7 C6 H13 299.2 300.0
C6 C7 C8 H14 120.7 120.0
C6 C7 C8 H15 239.3 240.0
C9 C8 C7 H16 239.4 240.1
C9 C8 C7 H17 120.6 120.0
H14 C7 C8 H15 118.6 120.0
H16 C8 C7 H17 241.2 240.0
C9 C8 C7 H14 174.5 60.0
C9 C8 C7 H15 55.9 300.0
C7 C8 C9 H16 120.6 119.9
C7 C8 C9 H17 239.4 240.0
H16 C8 C9 H17 118.8 120.0
C10 C9 C8 H16 128.3 7.7
C10 C9 C8 H17 9.4 247.6
C9 C10 C11 C12 196.1 126.3
C11 C10 C9 H19 180.0 180.0
C9 C10 C11 H20 316.7 246.4
C9 C10 C11 H21 75.6 6.3
C11 C10 C9 H18 180.2 187.5
C9 C10 C11 H19 180.0 180.0
C10 C11 C12 C13 184.0 180.0
C12 C11 C10 H20 239.4 239.9
C12 C11 C10 H21 120.5 120.0
C10 C11 C12 H22 304.6 300.0
C10 C11 C12 H23 63.3 60.0
H20 C11 C10 H21 241.1 240.1
C12 C11 C10 H19 16.1 306.3
C10 C11 C12 H20 120.5 120.1
C10 C11 C12 H21 239.4 240.0
C11 C12 C13 C14 182.4 180.0
C13 C12 C11 H22 239.4 240.0
C13 C12 C11 H23 120.7 120.0
C11 C12 C13 H24 303.1 300.0
C11 C12 C13 H25 61.7 60.0
H20 C11 C12 H21 118.9 119.9
H22 C12 C11 H23 241.3 240.0
C13 C12 C11 H20 63.5 59.9
C13 C12 C11 H21 304.6 300.0
C11 C12 C13 H22 120.6 120.0
C11 C12 C13 H23 239.3 240.0
C14 C13 C12 H24 239.3 240.0
C14 C13 C12 H25 120.7 120.0
C12 C13 C14 H26 178.8 300.0
C12 C13 C14 H27 60.3 60.0
H22 C12 C13 H23 118.7 120.0
H24 C13 C12 H25 241.4 240.0
C16 C15 C14 H26 304.6 60.0
C16 C15 C14 H27 63.2 300.0
H28 C15 C16 H29 241.1 120.0
H30 C16 C15 H31 240.0 240.0
H30 C16 C15 H32 120.0 120.0
H31 C16 C15 H32 240.0 240.0
C15 C14 C13 H24 178.8 60.0
C15 C14 C13 H25 60.2 300.0
C13 C14 C15 H26 239.3 119.9
C13 C14 C15 H27 120.7 240.0
H26 C14 C15 H27 241.5 120.1
C14 C13 C12 H22 61.7 60.0
C14 C13 C12 H23 303.0 300.0
C12 C13 C14 H24 120.7 120.0
C12 C13 C14 H25 239.3 240.0
C15 C14 C13 H26 120.7 240.0
C15 C14 C13 H27 239.3 120.0
H24 C13 C14 H25 118.6 120.0
H26 C14 C13 H27 118.5 240.0
CB CA HA C 112.4 120.0
HA CA C OXT   40.0
HA CA CB OG 173.3 55.0
HA CA CB HB3 293.2 175.0
HA CA CB HB2 53.4 295.0
HB3 CB CA C 50.1 295.1
CA CB HB3 OG 240.5 240.0
HB3 CB CA HA 293.2 175.0
CA CB HB3 HB2 120.3 120.0
HB3 CB OG C1 93.5 60.0
OG CB HB3 HB2 239.8 240.0
HB2 CB CA C 170.3 55.0
CA CB HB2 OG 119.5 120.0
HB2 CB CA HA 53.4 295.0
CA CB HB2 HB3 239.8 240.0
HB2 CB OG C1 333.4 300.0
OG CB HB2 HB3 120.2 120.0
C1 C2 H4 C3 236.2 240.0
C1 C2 H4 H5 118.1 120.0
H4 C2 C3 C4 48.9 60.0
C3 C2 H4 H5 241.9 240.0
H4 C2 C3 H6 169.4 180.0
H4 C2 C3 H7 288.5 300.0
C1 C2 H5 C3 123.8 120.0
C1 C2 H5 H4 241.9 240.0
H5 C2 C3 C4 290.2 300.0
C3 C2 H5 H4 118.1 120.0
H5 C2 C3 H6 50.6 60.0
H5 C2 C3 H7 169.7 180.0
C2 C3 H6 C4 237.2 239.9
H6 C3 C2 H4 169.4 180.0
H6 C3 C2 H5 50.6 60.0
C2 C3 H6 H7 118.6 120.0
H6 C3 C4 C5 65.7 59.9
C4 C3 H6 H7 241.4 240.0
H6 C3 C4 H8 186.5 180.0
H6 C3 C4 H9 305.0 300.0
C2 C3 H7 C4 122.8 120.0
H7 C3 C2 H4 288.5 300.0
H7 C3 C2 H5 169.7 180.0
C2 C3 H7 H6 241.4 240.0
H7 C3 C4 C5 306.6 300.0
C4 C3 H7 H6 118.6 120.0
H7 C3 C4 H8 67.4 60.0
H7 C3 C4 H9 185.9 180.0
C3 C4 H8 C5 235.6 239.9
H8 C4 C3 H6 186.5 180.0
H8 C4 C3 H7 67.4 60.0
C3 C4 H8 H9 117.8 120.0
H8 C4 C5 C6 52.5 60.0
C5 C4 H8 H9 242.2 240.0
H8 C4 C5 H10 173.1 180.0
H8 C4 C5 H11 291.9 300.0
C3 C4 H9 C5 124.4 120.0
H9 C4 C3 H6 305.0 300.0
H9 C4 C3 H7 185.9 180.0
C3 C4 H9 H8 242.2 240.0
H9 C4 C5 C6 293.9 300.0
C5 C4 H9 H8 117.8 120.0
H9 C4 C5 H10 54.6 60.0
H9 C4 C5 H11 173.3 180.0
C4 C5 H10 C6 236.1 240.0
H10 C5 C4 H8 173.1 180.0
H10 C5 C4 H9 54.6 60.0
C4 C5 H10 H11 118.1 120.0
H10 C5 C6 C7 178.7 60.0
C6 C5 H10 H11 242.0 240.0
H10 C5 C6 H12 299.4 180.0
H10 C5 C6 H13 58.1 300.0
C4 C5 H11 C6 123.9 119.9
H11 C5 C4 H8 291.9 300.0
H11 C5 C4 H9 173.3 180.0
C4 C5 H11 H10 241.9 240.0
H11 C5 C6 C7 60.0 300.0
C6 C5 H11 H10 118.0 120.0
H11 C5 C6 H12 180.7 59.9
H11 C5 C6 H13 299.4 179.9
C5 C6 H12 C7 235.8 240.0
H12 C6 C5 H10 299.4 180.0
H12 C6 C5 H11 180.7 59.9
C5 C6 H12 H13 117.9 120.0
H12 C6 C7 C8 57.8 60.0
C7 C6 H12 H13 242.1 240.0
H12 C6 C7 H14 178.5 180.0
H12 C6 C7 H15 297.1 300.0
C5 C6 H13 C7 124.2 120.0
H13 C6 C5 H10 58.1 300.0
H13 C6 C5 H11 299.4 179.9
C5 C6 H13 H12 242.1 240.0
H13 C6 C7 C8 299.2 300.0
C7 C6 H13 H12 117.9 119.9
H13 C6 C7 H14 59.8 60.1
H13 C6 C7 H15 178.4 180.0
C6 C7 H14 C8 235.8 240.0
H14 C7 C6 H12 178.5 180.0
H14 C7 C6 H13 59.8 60.1
C6 C7 H14 H15 117.9 120.0
C8 C7 H14 H15 242.1 240.0
H14 C7 C8 H16 295.1 180.0
H14 C7 C8 H17 53.9 300.0
C6 C7 H15 C8 124.3 120.0
H15 C7 C6 H12 297.1 300.0
H15 C7 C6 H13 178.4 180.0
C6 C7 H15 H14 242.1 240.1
C8 C7 H15 H14 117.9 120.0
H15 C7 C8 H16 176.5 60.0
H15 C7 C8 H17 295.3 180.0
H16 C8 C7 H14 295.1 180.0
H16 C8 C7 H15 176.5 60.0
C7 C8 H16 H17 118.2 120.0
C9 C8 H16 H17 241.7 240.0
H17 C8 C7 H14 53.9 300.0
H17 C8 C7 H15 295.3 180.0
C7 C8 H17 H16 241.8 240.0
C9 C8 H17 H16 118.3 120.0
H18 C9 C8 H16 308.3 187.7
H18 C9 C8 H17 189.4 67.6
H18 C9 C10 C11 180.2 187.5
H18 C9 C10 H19 0.2 7.5
C9 C10 H19 C11 180.0 180.0
H19 C10 C9 H18 0.2 7.5
H19 C10 C11 C12 16.1 306.3
H19 C10 C11 H20 136.7 66.4
H19 C10 C11 H21 255.6 186.3
C10 C11 H20 C12 236.6 239.9
H20 C11 C10 H19 136.7 66.4
C10 C11 H20 H21 118.3 119.9
H20 C11 C12 C13 63.5 59.9
C12 C11 H20 H21 241.7 240.0
H20 C11 C12 H22 184.1 179.9
H20 C11 C12 H23 302.8 299.9
C10 C11 H21 C12 123.4 120.0
H21 C11 C10 H19 255.6 186.3
C10 C11 H21 H20 241.7 240.0
H21 C11 C12 C13 304.6 300.0
C12 C11 H21 H20 118.3 120.0
H21 C11 C12 H22 65.2 60.0
H21 C11 C12 H23 183.9 180.0
C11 C12 H22 C13 236.1 240.0
H22 C12 C11 H20 184.1 179.9
H22 C12 C11 H21 65.2 60.0
C11 C12 H22 H23 118.1 120.0
H22 C12 C13 C14 61.7 60.0
C13 C12 H22 H23 242.0 240.0
H22 C12 C13 H24 182.4 180.0
H22 C12 C13 H25 301.1 300.0
C11 C12 H23 C13 123.9 120.0
H23 C12 C11 H20 302.8 299.9
H23 C12 C11 H21 183.9 180.0
C11 C12 H23 H22 241.9 240.0
H23 C12 C13 C14 303.0 300.0
C13 C12 H23 H22 118.0 120.0
H23 C12 C13 H24 63.7 60.0
H23 C12 C13 H25 182.3 180.0
C12 C13 H24 C14 235.6 240.0
H24 C13 C12 H22 182.4 180.0
H24 C13 C12 H23 63.7 60.0
C12 C13 H24 H25 117.8 120.0
C14 C13 H24 H25 242.2 240.0
H24 C13 C14 H26 58.1 180.0
H24 C13 C14 H27 299.6 300.0
C12 C13 H25 C14 124.3 120.0
H25 C13 C12 H22 301.1 300.0
H25 C13 C12 H23 182.3 180.0
C12 C13 H25 H24 242.2 240.0
C14 C13 H25 H24 117.8 120.0
H25 C13 C14 H26 299.5 60.0
H25 C13 C14 H27 181.0 180.0
C15 C14 H26 H27 117.7 239.9
H26 C14 C13 H24 58.1 180.0
H26 C14 C13 H25 299.5 60.0
C13 C14 H26 H27 242.3 120.0
C15 C14 H27 H26 242.3 120.1
H27 C14 C13 H24 299.6 300.0
H27 C14 C13 H25 181.0 180.0
C13 C14 H27 H26 117.7 240.0
C16 C15 H28 H29 118.3 240.0
H28 C15 C16 H30 300.6 180.0
H28 C15 C16 H31 60.6 300.0
H28 C15 C16 H32 180.6 60.0
H28 C15 C14 H26 184.1 180.1
H28 C15 C14 H27 302.6 60.0
C16 C15 H29 H28 241.7 120.0
H29 C15 C16 H30 59.5 60.0
H29 C15 C16 H31 179.5 180.0
H29 C15 C16 H32 299.5 300.0
H29 C15 C14 H26 65.2 300.1
H29 C15 C14 H27 183.7 180.0
H30 C16 C15 H28 300.6 180.0
H30 C16 C15 H29 59.5 60.0
C15 C16 H30 H31 120.0 120.0
C15 C16 H30 H32 240.0 240.0
H31 C16 H30 H32 120.0 120.0
H31 C16 C15 H28 60.6 300.0
H31 C16 C15 H29 179.5 180.0
C15 C16 H31 H30 240.0 240.0
C15 C16 H31 H32 120.0 120.0
H30 C16 H31 H32 240.0 240.0
H32 C16 C15 H28 180.6 60.0
H32 C16 C15 H29 299.5 300.0
C15 C16 H32 H30 120.0 120.0
C15 C16 H32 H31 240.0 240.0
H30 C16 H32 H31 120.0 120.0
H N CA HA 302.6 56.1
H2 N CA HA 62.6 180.1
OXT C CA HA   40.0