PDB Chemical Component NYH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NYH

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1A	N1A	1.335	1.480
C1A	C2A	1.349	1.295
C1A	C6A	1.517	1.500
N1A	O1N	1.302	1.218
N1A	O2N	1.301	1.218
C2A	C3A	1.527	1.501
C3A	C4A	1.523	1.529
C4A	C5A	1.522	1.534
C5A	C6A	1.512	1.531
C2A	H2A	1.080	1.080
C3A	H3A	1.100	1.091
C3A	H3AA	1.100	1.090
C4A	H4A	1.100	1.090
C4A	H4AA	1.100	1.090
C5A	H5A	1.100	1.090
C5A	H5AA	1.100	1.090
C6A	H6A	1.100	1.091
C6A	H6AA	1.100	1.090

Bond Angles for NYH

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N1A	C1A	C2A	119.6	118.0
N1A	C1A	C6A	118.8	118.0
C1A	N1A	O1N	120.7	120.0
C1A	N1A	O2N	119.9	120.0
C2A	C1A	C6A	121.6	124.0
C1A	C2A	C3A	122.8	124.1
C1A	C2A	H2A	118.6	117.9
C1A	C6A	C5A	112.5	110.1
C1A	C6A	H6A	108.4	109.3
C1A	C6A	H6AA	107.8	109.3
O1N	N1A	O2N	118.9	120.1
C2A	C3A	C4A	111.7	110.2
C3A	C2A	H2A	118.6	118.0
C2A	C3A	H3A	108.7	109.4
C2A	C3A	H3AA	108.2	109.3
C3A	C4A	C5A	110.0	108.5
C4A	C3A	H3A	108.7	109.3
C4A	C3A	H3AA	108.2	109.4
C3A	C4A	H4A	109.3	109.7
C3A	C4A	H4AA	109.2	109.7
C4A	C5A	C6A	109.2	108.3
C5A	C4A	H4A	109.3	109.6
C5A	C4A	H4AA	109.2	109.7
C4A	C5A	H5A	109.6	109.6
C4A	C5A	H5AA	109.6	109.6
C6A	C5A	H5A	109.6	109.9
C6A	C5A	H5AA	109.7	109.6
C5A	C6A	H6A	108.5	109.6
C5A	C6A	H6AA	107.8	109.3
H3A	C3A	H3AA	111.3	109.2
H4A	C4A	H4AA	109.9	109.7
H5A	C5A	H5AA	109.2	109.8
H6A	C6A	H6AA	111.9	109.2

Torsion Angles for NYH

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2A	C1A	N1A	C6A	180.5	180.3
N1A	C1A	C2A	C3A	179.9	180.4
N1A	C1A	C2A	H2A	359.9	0.4
N1A	C1A	C6A	C5A	162.3	162.7
N1A	C1A	C6A	H6A	282.3	283.1
N1A	C1A	C6A	H6AA	43.6	42.6
O1N	N1A	C1A	O2N	171.5	180.0
N1A	C1A	C2A	C6A	179.5	179.7
C2A	C1A	N1A	O1N	349.7	360.0
C2A	C1A	N1A	O2N	178.3	180.0
C2A	C1A	C6A	C5A	341.8	342.4
C2A	C1A	C6A	H6A	101.8	102.9
C2A	C1A	C6A	H6AA	223.1	222.3
C1A	C2A	C3A	C4A	345.0	342.9
C3A	C2A	C1A	H2A	180.0	180.0
C1A	C2A	C3A	H3A	105.0	103.1
C1A	C2A	C3A	H3AA	225.9	222.6
N1A	C1A	C6A	C2A	180.5	180.3
C6A	C1A	N1A	O1N	169.3	179.7
C6A	C1A	N1A	O2N	357.8	359.8
C6A	C1A	C2A	C3A	0.4	0.7
C6A	C1A	C2A	H2A	180.4	180.7
C4A	C5A	C6A	C1A	49.8	49.8
C1A	C6A	C5A	H5A	289.7	290.1
C1A	C6A	C5A	H5AA	169.9	169.3
C5A	C6A	C1A	H6A	240.0	239.6
C5A	C6A	C1A	H6AA	118.7	120.1
H6A	C6A	C1A	H6AA	238.7	240.5
O1N	N1A	C1A	C2A	349.7	360.0
O1N	N1A	C1A	C6A	169.3	179.7
C1A	N1A	O1N	O2N	188.4	180.0
O2N	N1A	C1A	C2A	178.3	180.0
O2N	N1A	C1A	C6A	357.8	359.8
C1A	N1A	O2N	O1N	171.6	180.0
C3A	C2A	C1A	C6A	0.4	0.7
C1A	C2A	C3A	H2A	180.0	180.0
C2A	C3A	C4A	C5A	46.8	49.4
C4A	C3A	C2A	H3A	240.0	239.8
C4A	C3A	C2A	H3AA	119.0	120.3
C2A	C3A	C4A	H4A	166.8	169.1
C2A	C3A	C4A	H4AA	287.0	289.7
H3A	C3A	C2A	H3AA	239.0	240.4
C4A	C3A	C2A	H2A	165.0	162.9
C2A	C3A	C4A	H3A	120.0	120.2
C2A	C3A	C4A	H3AA	240.9	239.8
C3A	C4A	C5A	C6A	294.6	292.4
C5A	C4A	C3A	H4A	240.0	240.3
C5A	C4A	C3A	H4AA	119.8	119.7
C3A	C4A	C5A	H5A	54.6	52.3
C3A	C4A	C5A	H5AA	174.5	172.9
H3A	C3A	C4A	H3AA	121.0	119.6
H4A	C4A	C3A	H4AA	239.8	239.4
C1A	C6A	C5A	C4A	49.8	49.8
C5A	C4A	C3A	H3A	286.8	289.2
C5A	C4A	C3A	H3AA	165.8	169.6
C3A	C4A	C5A	H4A	120.0	119.7
C3A	C4A	C5A	H4AA	240.2	240.3
C6A	C5A	C4A	H5A	240.0	240.2
C6A	C5A	C4A	H5AA	120.1	119.5
C4A	C5A	C6A	H6A	289.8	289.5
C4A	C5A	C6A	H6AA	168.5	169.9
H4A	C4A	C5A	H4AA	120.2	120.5
H5A	C5A	C4A	H5AA	240.1	239.4
C1A	C6A	C5A	H6A	120.0	120.3
C1A	C6A	C5A	H6AA	241.3	239.9
C6A	C5A	C4A	H4A	174.6	172.7
C6A	C5A	C4A	H4AA	54.4	52.2
C4A	C5A	C6A	H5A	120.0	119.7
C4A	C5A	C6A	H5AA	239.9	240.5
H5A	C5A	C6A	H5AA	119.9	120.8
H6A	C6A	C5A	H6AA	121.3	119.6
H2A	C2A	C1A	C6A	180.4	180.7
C1A	C2A	H2A	C3A	180.0	180.0
H2A	C2A	C3A	C4A	165.0	162.9
H2A	C2A	C3A	H3A	285.0	283.1
H2A	C2A	C3A	H3AA	45.9	42.6
C2A	C3A	H3A	C4A	238.2	239.3
H3A	C3A	C2A	H2A	285.0	283.1
C2A	C3A	H3A	H3AA	119.1	119.6
H3A	C3A	C4A	C5A	286.8	289.2
C4A	C3A	H3A	H3AA	240.9	240.3
H3A	C3A	C4A	H4A	46.8	48.9
H3A	C3A	C4A	H4AA	167.0	169.5
C2A	C3A	H3AA	C4A	121.2	120.7
H3AA	C3A	C2A	H2A	45.9	42.6
C2A	C3A	H3AA	H3A	240.6	240.4
H3AA	C3A	C4A	C5A	165.8	169.6
C4A	C3A	H3AA	H3A	119.4	119.6
H3AA	C3A	C4A	H4A	285.8	289.3
H3AA	C3A	C4A	H4AA	46.0	49.9
C3A	C4A	H4A	C5A	239.6	241.0
H4A	C4A	C3A	H3A	46.8	48.9
H4A	C4A	C3A	H3AA	285.8	289.3
C3A	C4A	H4A	H4AA	119.8	120.5
H4A	C4A	C5A	C6A	174.6	172.7
C5A	C4A	H4A	H4AA	240.2	239.5
H4A	C4A	C5A	H5A	294.6	292.5
H4A	C4A	C5A	H5AA	54.5	53.2
C3A	C4A	H4AA	C5A	120.3	119.0
H4AA	C4A	C3A	H3A	167.0	169.5
H4AA	C4A	C3A	H3AA	46.0	49.9
C3A	C4A	H4AA	H4A	240.2	239.5
H4AA	C4A	C5A	C6A	54.4	52.2
C5A	C4A	H4AA	H4A	119.9	120.5
H4AA	C4A	C5A	H5A	174.4	172.0
H4AA	C4A	C5A	H5AA	294.3	292.6
C4A	C5A	H5A	C6A	240.2	241.1
H5A	C5A	C4A	H4A	294.6	292.5
H5A	C5A	C4A	H4AA	174.4	172.0
C4A	C5A	H5A	H5AA	120.1	120.5
C6A	C5A	H5A	H5AA	239.9	239.4
H5A	C5A	C6A	H6A	169.8	169.8
H5A	C5A	C6A	H6AA	48.5	50.2
C4A	C5A	H5AA	C6A	119.9	118.7
H5AA	C5A	C4A	H4A	54.5	53.2
H5AA	C5A	C4A	H4AA	294.3	292.6
C4A	C5A	H5AA	H5A	239.9	239.5
C6A	C5A	H5AA	H5A	120.1	120.8
H5AA	C5A	C6A	H6A	49.9	49.0
H5AA	C5A	C6A	H6AA	288.6	289.4
C1A	C6A	H6A	C5A	237.5	239.2
C1A	C6A	H6A	H6AA	118.7	119.5
H6A	C6A	C5A	H5A	169.8	169.8
H6A	C6A	C5A	H5AA	49.9	49.0
C5A	C6A	H6A	H6AA	241.2	240.3
C1A	C6A	H6AA	C5A	121.7	120.6
C1A	C6A	H6AA	H6A	240.9	240.5
H6AA	C6A	C5A	H5A	48.5	50.2
H6AA	C6A	C5A	H5AA	288.6	289.4
C5A	C6A	H6AA	H6A	119.2	119.8