PDB Chemical Component NXC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NXC

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
PT	N2	2.036	2.036
PT	CL	2.367	2.367
C1	C6	1.484	1.484
C1	PT	2.016	2.016
C6	C10	1.511	1.511
C10	N2	1.471	1.471
C10	H10	1.100	1.100
C10	H10A	1.100	1.100
N2	C12	1.468	1.468
C12	H12	1.100	1.100
C12	H12A	1.100	1.100
C12	H12B	1.100	1.100
C11	N2	1.470	1.470
C11	H11	1.100	1.100
C11	H11A	1.100	1.100
C11	H11B	1.100	1.099
C5	C6	1.390	1.390
C5	H5	1.080	1.080
C4	C5	1.392	1.392
C3	C4	1.392	1.392
C3	C2	1.390	1.390
C3	H3	1.081	1.081
C2	C1	1.484	1.484
C7	C2	1.512	1.512
C7	N1	1.471	1.471
C7	H7	1.100	1.100
C7	H7A	1.100	1.100
N1	C8	1.469	1.469
N1	PT	2.036	2.036
C9	N1	1.468	1.468
C9	H9	1.100	1.100
C9	H9A	1.100	1.100
C9	H9B	1.100	1.100
C8	H8	1.100	1.100
C8	H8A	1.100	1.100
C8	H8B	1.101	1.101
C13	C4	1.523	1.523
C13	H13	1.100	1.100
C13	H13A	1.100	1.100
C14	C13	1.512	1.512
C14	H14	1.100	1.100
C14	H14A	1.100	1.101
C15	C14	1.521	1.521
C15	H15	1.100	1.100
C15	H15A	1.100	1.100
P	C15	1.803	1.803
P	O1	1.761	1.761
O2	P	1.645	1.645
O1	C16	1.390	1.390
C16	C17	1.509	1.509
C16	H16	1.101	1.100
C16	H16A	1.100	1.100
C17	H17	1.100	1.100
C17	H17A	1.100	1.100
C17	H17B	1.100	1.100
P	O3	1.720	1.720
O3	C18	1.431	1.431
C19	C18	1.539	1.539
C18	C20	1.540	1.540
C20	C21	1.539	1.539
C21	C22	1.540	1.540
C22	C23	1.540	1.540
C19	C23	1.540	1.540
C22	N3	1.470	1.470
N3	O4	1.360	1.360
N3	O5	1.360	1.360
C19	H30	1.080	1.080
C20	H31	1.080	1.080
C21	H32	1.080	1.080
C23	H33	1.080	1.080

Bond Angles for NXC

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	PT	N2	80.8	80.8
PT	N2	C10	117.8	117.8
PT	N2	C12	106.4	106.4
C1	C6	C10	113.1	113.1
C6	C10	N2	111.3	111.3
C6	C10	H10	108.8	108.8
C6	C10	H10A	108.9	108.9
N2	C10	H10	108.9	108.9
N2	C10	H10A	108.9	108.9
C10	N2	C12	107.4	107.4
H10	C10	H10A	110.1	110.1
N2	C12	H12	109.5	109.5
N2	C12	H12A	109.5	109.5
N2	C12	H12B	109.5	109.5
H12	C12	H12A	109.5	109.5
H12	C12	H12B	109.4	109.4
H12A	C12	H12B	109.5	109.5
H11	C11	H11A	109.4	109.4
H11	C11	H11B	109.5	109.5
H11A	C11	H11B	109.5	109.5
C4	C5	H5	121.0	121.0
C2	C3	H3	119.7	119.7
N1	C7	H7	108.4	108.4
N1	C7	H7A	108.4	108.4
C7	N1	C8	109.5	109.5
H7	C7	H7A	110.4	110.5
C9	N1	C8	108.2	108.2
N1	C8	H8	109.5	109.5
N1	C8	H8A	109.4	109.5
N1	C8	H8B	109.5	109.5
H9	C9	H9A	109.5	109.5
H9	C9	H9B	109.4	109.4
H9A	C9	H9B	109.5	109.5
H8	C8	H8A	109.5	109.4
H8	C8	H8B	109.4	109.4
H8A	C8	H8B	109.5	109.5
H13	C13	H13A	111.6	111.6
C14	C13	H13	107.3	107.3
C14	C13	H13A	107.3	107.3
H14	C14	H14A	108.1	108.2
C15	C14	H14	110.8	110.8
C15	C14	H14A	110.8	110.8
H15	C15	H15A	110.1	110.1
P	C15	H15	108.8	108.8
P	C15	H15A	108.8	108.8
O2	P	O1	112.1	112.1
P	O1	C16	124.3	124.3
O1	P	O3	112.4	112.4
O2	P	O3	130.6	130.6
O1	C16	C17	105.0	105.0
O1	C16	H16	111.0	111.0
O1	C16	H16A	111.0	111.0
C17	C16	H16	111.0	111.0
C17	C16	H16A	111.0	111.0
C16	C17	H17	109.5	109.5
C16	C17	H17A	109.4	109.4
C16	C17	H17B	109.5	109.5
H16	C16	H16A	107.9	107.8
H17	C17	H17A	109.5	109.5
H17	C17	H17B	109.4	109.4
H17A	C17	H17B	109.5	109.5
P	O3	C18	135.0	135.0
O3	C18	C20	120.0	120.0
C19	C18	C20	120.0	120.0
C18	C20	C21	120.0	120.0
C18	C20	H31	120.0	120.0
C20	C21	C22	120.0	120.0
C21	C20	H31	120.0	120.0
C20	C21	H32	120.0	120.0
C21	C22	C23	120.0	120.0
C21	C22	N3	120.0	120.0
C22	C21	H32	120.0	120.0
C19	C23	C22	120.0	120.0
C23	C22	N3	120.0	120.0
C22	C23	H33	120.0	120.0
C23	C19	H30	120.0	120.0
C19	C23	H33	120.0	120.0
C22	N3	O4	135.0	135.0
C22	N3	O5	120.0	120.0
O4	N3	O5	105.0	105.0

Torsion Angles for NXC

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C10	N2	PT	359.4	359.4
PT	N2	C10	H10	239.5	239.5
PT	N2	C10	H10A	119.5	119.5
C10	N2	PT	C12	239.4	239.4
PT	N2	C12	H12	180.0	180.0
PT	N2	C12	H12A	300.0	300.0
PT	N2	C12	H12B	60.0	60.0
C6	C1	PT	N2	359.1	359.1
C1	C6	C10	N2	359.9	359.9
C1	C6	C10	H10	119.9	119.9
C1	C6	C10	H10A	239.8	239.8
C1	PT	N2	C10	0.8	0.8
C1	PT	N2	C12	121.3	121.3
PT	N2	C10	C6	359.4	359.4
N2	C10	C6	H10	240.0	240.0
N2	C10	C6	H10A	120.0	120.0
C6	C10	N2	C12	239.4	239.4
H10	C10	C6	H10A	240.0	240.0
PT	N2	C10	C12	120.0	120.0
C6	C10	N2	H10	120.0	120.0
C6	C10	N2	H10A	240.0	240.0
H10	C10	N2	H10A	120.0	120.0
C10	N2	C12	H12	307.0	307.0
C10	N2	C12	H12A	67.1	67.1
C10	N2	C12	H12B	187.0	187.0
C6	C10	H10	N2	238.5	238.5
C6	C10	H10	H10A	119.2	119.2
N2	C10	H10	H10A	240.8	240.8
H10	C10	N2	C12	119.4	119.4
C6	C10	H10A	N2	121.5	121.5
C6	C10	H10A	H10	240.8	240.8
N2	C10	H10A	H10	119.3	119.3
H10A	C10	N2	C12	359.4	359.4
PT	N2	C12	C10	233.0	233.0
C12	N2	C10	H10	119.4	119.4
C12	N2	C10	H10A	359.4	359.4
H12	C12	N2	H12A	240.0	240.0
H12	C12	N2	H12B	120.0	120.0
H12A	C12	N2	H12B	240.0	240.0
N2	C12	H12	H12A	120.0	120.0
N2	C12	H12	H12B	240.0	240.0
H12A	C12	H12	H12B	120.0	120.0
N2	C12	H12A	H12	239.9	239.9
N2	C12	H12A	H12B	120.0	120.0
H12	C12	H12A	H12B	240.1	240.1
N2	C12	H12B	H12	120.0	120.0
N2	C12	H12B	H12A	240.0	240.0
H12	C12	H12B	H12A	120.0	120.0
C11	N2	C10	H10	2.4	2.4
C11	N2	C10	H10A	242.4	242.4
C11	N2	C12	H12	64.0	64.0
C11	N2	C12	H12A	184.0	184.0
C11	N2	C12	H12B	304.0	304.0
H11A	C11	H11	H11B	120.0	120.0
H11	C11	H11A	H11B	240.0	240.0
H11	C11	H11B	H11A	120.0	120.0
C5	C6	C10	H10	300.2	300.2
C5	C6	C10	H10A	60.2	60.2
C3	C4	C5	H5	180.6	180.6
C7	C2	C3	H3	0.2	0.2
H7	C7	N1	H7A	120.0	120.0
C9	N1	C7	C8	117.1	117.1
C7	N1	C8	H8	180.0	180.0
C7	N1	C8	H8A	300.0	300.0
C7	N1	C8	H8B	60.0	60.0
N1	C7	H7	H7A	241.3	241.3
H7	C7	N1	C8	5.0	5.1
N1	C7	H7A	H7	118.7	118.7
H7A	C7	N1	C8	245.1	245.1
C8	N1	C7	H7	5.0	5.1
C8	N1	C7	H7A	245.1	245.1
H8	C8	N1	H8A	240.0	240.0
H8	C8	N1	H8B	120.0	120.0
H8A	C8	N1	H8B	240.0	240.0
C9	N1	C7	H7	122.1	122.2
C9	N1	C7	H7A	2.2	2.2
C7	N1	C9	C8	242.0	242.0
C9	N1	C8	H8	63.7	63.7
C9	N1	C8	H8A	183.7	183.7
C9	N1	C8	H8B	303.7	303.7
H9	C9	N1	C8	298.0	298.0
H9A	C9	H9	H9B	120.0	120.0
H9A	C9	N1	C8	57.9	57.9
H9	C9	H9A	H9B	240.0	240.0
H9B	C9	N1	C8	178.0	178.0
H9	C9	H9B	H9A	120.0	120.0
N1	C8	H8	H8A	120.0	120.0
N1	C8	H8	H8B	240.0	240.0
H8A	C8	H8	H8B	120.0	120.0
N1	C8	H8A	H8	240.0	239.9
N1	C8	H8A	H8B	120.0	120.0
H8	C8	H8A	H8B	240.0	240.1
N1	C8	H8B	H8	120.0	120.0
N1	C8	H8B	H8A	240.0	240.0
H8	C8	H8B	H8A	120.0	119.9
C13	C4	C5	H5	359.0	359.0
C14	C13	H13	H13A	242.8	242.8
C14	C13	H13A	H13	117.2	117.2
H13	C13	C14	H13A	120.0	120.0
H14	C14	C13	H13	166.9	166.9
H14	C14	C13	H13A	46.9	46.9
C15	C14	H14	H14A	238.4	238.5
H14A	C14	C13	H13	286.9	286.9
H14A	C14	C13	H13A	166.9	166.9
C15	C14	H14A	H14	121.5	121.5
C15	C14	C13	H13	46.9	46.9
C15	C14	C13	H13A	286.9	286.9
H14	C14	C15	H14A	120.0	120.0
H15	C15	C14	H14	169.1	169.1
H15	C15	C14	H14A	49.1	49.1
P	C15	H15	H15A	240.8	240.8
H15A	C15	C14	H14	289.1	289.0
H15A	C15	C14	H14A	169.1	169.0
P	C15	H15A	H15	119.2	119.2
P	C15	C14	H14	49.1	49.1
P	C15	C14	H14A	289.1	289.1
H15	C15	P	H15A	120.0	120.0
O1	P	C15	H15	177.6	177.6
O1	P	C15	H15A	57.6	57.6
O2	P	O1	O3	158.1	158.1
P	O1	C16	C17	151.3	151.3
P	O1	C16	H16	271.3	271.3
P	O1	C16	H16A	31.3	31.3
O1	P	O3	C18	46.4	46.4
O2	P	C15	H15	312.9	312.9
O2	P	C15	H15A	192.9	193.0
O2	P	O1	C16	174.7	174.7
O1	P	O2	O3	207.0	207.0
O2	P	O3	C18	253.4	253.4
C16	O1	P	O3	16.6	16.6
C17	C16	O1	H16	240.0	240.0
C17	C16	O1	H16A	120.0	120.0
O1	C16	C17	H17	180.0	180.0
O1	C16	C17	H17A	300.0	300.0
O1	C16	C17	H17B	60.0	60.0
H16	C16	O1	H16A	240.0	240.0
O1	C16	C17	H16	120.0	120.0
O1	C16	C17	H16A	240.0	240.0
H16	C16	C17	H16A	120.0	120.0
H17	C17	C16	H17A	240.0	240.0
H17	C17	C16	H17B	120.0	120.0
H17A	C17	C16	H17B	240.0	240.0
O1	C16	H16	C17	243.7	243.6
O1	C16	H16	H16A	121.8	121.8
C17	C16	H16	H16A	238.2	238.2
H16	C16	C17	H17	60.0	60.0
H16	C16	C17	H17A	180.0	180.0
H16	C16	C17	H17B	300.0	300.0
O1	C16	H16A	C17	116.4	116.4
O1	C16	H16A	H16	238.2	238.2
C17	C16	H16A	H16	121.8	121.8
H16A	C16	C17	H17	300.0	300.0
H16A	C16	C17	H17A	60.0	60.0
H16A	C16	C17	H17B	180.0	180.0
H17	C17	C16	H16	60.0	60.0
H17	C17	C16	H16A	300.0	300.0
C16	C17	H17	H17A	120.0	120.0
C16	C17	H17	H17B	240.0	240.0
H17A	C17	H17	H17B	120.0	120.0
H17A	C17	C16	H16	180.0	180.0
H17A	C17	C16	H16A	60.0	60.0
C16	C17	H17A	H17	240.0	240.0
C16	C17	H17A	H17B	120.0	120.0
H17	C17	H17A	H17B	240.0	240.0
H17B	C17	C16	H16	300.0	300.0
H17B	C17	C16	H16A	180.0	180.0
C16	C17	H17B	H17	120.0	120.0
C16	C17	H17B	H17A	240.0	240.0
H17	C17	H17B	H17A	120.0	120.0
O3	P	C15	H15	76.9	76.9
O3	P	C15	H15A	316.9	316.9
O2	P	O3	O1	207.1	207.1
O3	P	O1	C16	16.6	16.6
P	O3	C18	C20	-0.0	-0.0
C19	C18	O3	C20	180.0	180.0
O3	C18	C20	C21	180.0	180.0
O3	C18	C20	H31	360.0	360.0
O3	C18	C19	C20	180.0	180.0
C19	C18	C20	C21	-0.0	-0.0
C19	C18	C20	H31	180.0	180.0
C18	C20	C21	C22	-0.0	-0.0
C21	C20	C18	H31	180.0	180.0
C18	C20	C21	H32	180.0	180.0
C18	C20	C21	H31	180.0	180.0
C20	C21	C22	C23	-0.0	-0.0
C20	C21	C22	N3	180.0	180.0
C22	C21	C20	H32	180.0	180.0
C22	C21	C20	H31	180.0	180.0
C20	C21	C22	H32	180.0	180.0
C19	C23	C22	C21	-0.0	-0.0
C23	C22	C21	N3	180.0	180.0
C21	C22	C23	H33	180.0	180.0
C21	C22	N3	O4	180.0	180.0
C21	C22	N3	O5	-0.0	-0.0
C21	C22	C23	N3	180.0	180.0
C23	C22	C21	H32	180.0	180.0
C22	C23	C19	H30	180.0	180.0
C19	C23	C22	H33	180.0	180.0
C23	C22	N3	O4	-0.0	-0.0
C23	C22	N3	O5	180.0	180.0
C23	C19	C18	C20	-0.0	-0.0
C21	C22	C23	C19	-0.0	-0.0
C19	C23	C22	N3	180.0	180.0
C22	C23	C19	H33	180.0	180.0
C21	C22	N3	C23	180.0	180.0
N3	C22	C21	H32	-0.0	-0.0
N3	C22	C23	H33	-0.0	-0.0
O4	N3	C22	O5	180.0	180.0
C22	N3	O4	O5	180.0	180.0
C22	N3	O5	O4	180.0	180.0
H30	C19	C18	C20	180.0	180.0
H30	C19	C23	C22	180.0	180.0
H30	C19	C23	H33	-0.0	-0.0
C18	C20	H31	C21	180.0	180.0
H31	C20	C21	C22	180.0	180.0
H31	C20	C21	H32	-0.0	-0.0
C20	C21	H32	C22	180.0	180.0
H32	C21	C20	H31	-0.0	-0.0
H32	C21	C22	C23	180.0	180.0
H32	C21	C22	N3	360.0	360.0
C19	C23	H33	C22	180.0	180.0
H33	C23	C22	N3	-0.0	-0.0
H33	C23	C19	H30	-0.0	-0.0