PDB Chemical Component NX2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NX2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| S6 |
C1 |
1.831 |
1.762 |
| C1 |
C5 |
1.331 |
1.375 |
| C1 |
C2 |
1.340 |
1.383 |
| C2 |
C3 |
1.460 |
1.335 |
| C2 |
H2 |
1.080 |
1.081 |
| S4 |
C3 |
1.784 |
1.706 |
| C3 |
H3 |
1.080 |
1.080 |
| C5 |
S4 |
1.719 |
1.759 |
| C16 |
C5 |
1.474 |
1.414 |
| S6 |
C7 |
1.789 |
1.814 |
| C8 |
C7 |
1.497 |
1.507 |
| C7 |
H7 |
1.100 |
1.090 |
| C7 |
H7A |
1.099 |
1.090 |
| C11 |
C8 |
1.446 |
1.382 |
| C9 |
C8 |
1.440 |
1.382 |
| C12 |
C9 |
1.428 |
1.383 |
| C9 |
H9 |
1.080 |
1.080 |
| C13 |
C10 |
1.430 |
1.383 |
| C10 |
C11 |
1.427 |
1.382 |
| C10 |
H10 |
1.080 |
1.080 |
| C11 |
H11 |
1.080 |
1.080 |
| C13 |
C12 |
1.449 |
1.385 |
| CL15 |
C12 |
1.735 |
1.735 |
| CL14 |
C13 |
1.719 |
1.736 |
| O18 |
C16 |
1.218 |
1.218 |
| C16 |
N17 |
1.345 |
1.348 |
| S19 |
N17 |
1.686 |
1.656 |
| N17 |
HN17 |
0.999 |
0.970 |
| O21 |
S19 |
1.457 |
1.421 |
| C20 |
S19 |
1.809 |
1.814 |
| S19 |
O22 |
1.454 |
1.421 |
| C20 |
H20 |
1.100 |
1.090 |
| C20 |
H20A |
1.100 |
1.090 |
| C20 |
H20B |
1.100 |
1.089 |
Bond Angles for NX2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C5 |
132.5 |
112.9 |
| C1 |
C5 |
S4 |
100.6 |
109.0 |
| C1 |
C2 |
C3 |
102.3 |
115.1 |
| C1 |
C2 |
H2 |
128.9 |
122.4 |
| C3 |
C2 |
H2 |
128.8 |
122.4 |
| C2 |
C3 |
H3 |
125.5 |
124.4 |
| S4 |
C3 |
H3 |
125.5 |
124.4 |
| S6 |
C7 |
H7 |
108.6 |
109.4 |
| S6 |
C7 |
H7A |
108.6 |
109.4 |
| C8 |
C7 |
H7 |
108.6 |
109.5 |
| C8 |
C7 |
H7A |
108.6 |
109.5 |
| H7 |
C7 |
H7A |
110.4 |
109.5 |
| C12 |
C9 |
H9 |
122.6 |
120.0 |
| C13 |
C10 |
H10 |
122.3 |
120.0 |
| C11 |
C10 |
H10 |
122.3 |
120.0 |
| C10 |
C11 |
H11 |
119.8 |
120.0 |
| C16 |
N17 |
HN17 |
118.6 |
120.0 |
| S19 |
N17 |
HN17 |
118.6 |
120.0 |
| O21 |
S19 |
O22 |
117.8 |
121.0 |
| C20 |
S19 |
O22 |
105.9 |
110.5 |
| H20 |
C20 |
H20A |
109.5 |
109.4 |
| H20 |
C20 |
H20B |
109.5 |
109.4 |
| H20A |
C20 |
H20B |
109.5 |
109.5 |
Torsion Angles for NX2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| S6 |
C1 |
C2 |
H2 |
3.8 |
359.7 |
| C5 |
C1 |
C2 |
C3 |
1.5 |
360.0 |
| C5 |
C1 |
C2 |
H2 |
181.5 |
180.0 |
| C2 |
C1 |
C5 |
S4 |
1.1 |
360.0 |
| C3 |
C2 |
C1 |
H2 |
180.0 |
179.9 |
| C1 |
C2 |
C3 |
H3 |
176.7 |
180.0 |
| C3 |
C2 |
C1 |
C5 |
1.5 |
360.0 |
| C1 |
C2 |
C3 |
H2 |
180.0 |
180.1 |
| S4 |
C3 |
C2 |
H3 |
180.0 |
180.1 |
| H2 |
C2 |
C1 |
C5 |
181.5 |
180.0 |
| C1 |
C2 |
H2 |
C3 |
180.0 |
179.9 |
| H2 |
C2 |
C3 |
H3 |
356.7 |
359.9 |
| C1 |
C5 |
S4 |
C3 |
357.4 |
0.0 |
| S4 |
C3 |
C2 |
H2 |
176.7 |
180.0 |
| C2 |
C3 |
S4 |
H3 |
180.0 |
179.9 |
| H3 |
C3 |
C2 |
H2 |
356.7 |
359.9 |
| C5 |
S4 |
C3 |
H3 |
183.7 |
180.0 |
| C8 |
C7 |
S6 |
H7 |
240.0 |
240.0 |
| C8 |
C7 |
S6 |
H7A |
120.0 |
120.0 |
| H7 |
C7 |
S6 |
H7A |
240.0 |
240.0 |
| S6 |
C7 |
C8 |
H7 |
120.0 |
120.0 |
| S6 |
C7 |
C8 |
H7A |
240.0 |
240.0 |
| H7 |
C7 |
C8 |
H7A |
120.0 |
120.1 |
| S6 |
C7 |
H7 |
H7A |
118.9 |
120.0 |
| C8 |
C7 |
H7 |
H7A |
241.1 |
240.0 |
| S6 |
C7 |
H7A |
H7 |
241.1 |
240.0 |
| C8 |
C7 |
H7A |
H7 |
118.9 |
120.0 |
| C11 |
C8 |
C7 |
H7 |
161.9 |
149.8 |
| C11 |
C8 |
C7 |
H7A |
41.9 |
29.7 |
| C9 |
C8 |
C7 |
H7 |
343.2 |
330.0 |
| C9 |
C8 |
C7 |
H7A |
223.2 |
209.9 |
| C11 |
C10 |
C13 |
H10 |
180.0 |
180.1 |
| C13 |
C10 |
C11 |
H11 |
181.3 |
180.0 |
| C13 |
C10 |
C11 |
H10 |
180.0 |
179.9 |
| H10 |
C10 |
C11 |
H11 |
1.3 |
0.1 |
| H11 |
C11 |
C10 |
H10 |
1.3 |
0.1 |
| C13 |
C12 |
C9 |
H9 |
179.6 |
180.0 |
| C12 |
C13 |
C10 |
H10 |
178.0 |
180.3 |
| CL15 |
C12 |
C9 |
H9 |
358.4 |
359.9 |
| CL14 |
C13 |
C10 |
H10 |
356.6 |
359.9 |
| O18 |
C16 |
N17 |
HN17 |
173.4 |
180.0 |
| S19 |
N17 |
C16 |
HN17 |
180.0 |
180.0 |
| C16 |
N17 |
S19 |
HN17 |
180.0 |
180.0 |
| O21 |
S19 |
N17 |
HN17 |
213.1 |
1.0 |
| C20 |
S19 |
O21 |
O22 |
240.8 |
228.5 |
| C20 |
S19 |
N17 |
HN17 |
95.4 |
244.9 |
| O21 |
S19 |
C20 |
O22 |
126.6 |
136.8 |
| O22 |
S19 |
N17 |
HN17 |
341.3 |
128.9 |
| H20 |
C20 |
S19 |
O22 |
294.4 |
171.6 |
| H20A |
C20 |
H20 |
H20B |
120.0 |
120.0 |
| H20A |
C20 |
S19 |
O22 |
54.4 |
291.6 |
| H20 |
C20 |
H20A |
H20B |
240.0 |
240.0 |
| H20B |
C20 |
S19 |
O22 |
174.3 |
51.6 |
| H20 |
C20 |
H20B |
H20A |
120.0 |
119.9 |