PDB Chemical Component NUT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NUT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O2 C28 1.228 1.213
C28 C29 1.507 1.504
C28 N3 1.340 1.333
C29 N2 1.467 1.471
O3 C25 1.254 1.215
N3 C27 1.466 1.457
C25 N2 1.328 1.348
C25 N1 1.360 1.348
N2 C26 1.466 1.473
C27 C26 1.517 1.535
C11 C18 1.606 1.541
C11 N 1.480 1.470
C11 C12 1.506 1.508
C3 C2 1.413 1.376
C3 C9 1.387 1.397
N1 C18 1.461 1.473
N1 C10 1.347 1.377
C2 C1 1.403 1.392
C17 C12 1.394 1.383
C17 C16 1.417 1.382
C18 C19 1.505 1.507
C10 N 1.272 1.293
C10 C9 1.498 1.476
C9 C5 1.474 1.401
C O 1.438 1.429
C12 C13 1.417 1.382
C1 O 1.366 1.357
C1 C4 1.389 1.387
C16 C15 1.411 1.383
C5 C4 1.402 1.384
C5 O1 1.368 1.358
C8 C6 1.533 1.529
O1 C6 1.450 1.429
C19 C24 1.405 1.383
C19 C20 1.411 1.382
C24 C23 1.393 1.382
C13 C14 1.428 1.382
C15 C14 1.403 1.384
C15 CL 1.790 1.736
C6 C7 1.525 1.530
C20 C21 1.397 1.382
C23 C22 1.385 1.383
C21 C22 1.402 1.384
C22 CL1 1.771 1.736
C29 H1 1.100 1.089
C29 H2 1.100 1.090
N3 H3 1.000 0.970
C27 H4 1.100 1.090
C27 H5 1.100 1.090
C26 H6 1.100 1.090
C26 H7 1.100 1.090
C3 H9 1.080 1.080
C2 H10 1.080 1.080
C6 H11 1.101 1.090
C8 H12 1.100 1.090
C8 H13 1.100 1.091
C8 H14 1.100 1.090
C7 H15 1.100 1.090
C7 H16 1.100 1.091
C7 H17 1.100 1.090
C4 H18 1.080 1.079
C H19 1.100 1.090
C H20 1.100 1.091
C H21 1.100 1.090
C18 H22 1.100 1.090
C24 H23 1.080 1.080
C23 H24 1.080 1.080
C21 H25 1.080 1.079
C20 H26 1.080 1.080
C11 H27 1.100 1.089
C17 H30 1.080 1.080
C16 H31 1.080 1.080
C14 H32 1.080 1.080
C13 H33 1.080 1.080

Bond Angles for NUT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O2 C28 N3 122.6 118.5
C28 C29 H1 108.2 109.6
C28 C29 H2 108.2 109.8
C28 N3 C27 123.4 124.6
C28 N3 H3 118.3 117.7
C29 N2 C26 115.7 117.3
O3 C25 N2 118.9 120.0
O3 C25 N1 116.7 120.0
N3 C27 C26 113.9 110.7
C27 N3 H3 118.3 117.7
N3 C27 H4 108.4 109.2
N3 C27 H5 108.4 109.2
N2 C25 N1 124.4 120.0
C25 N2 C26 124.0 121.4
C25 N1 C18 122.8 125.9
C25 N1 C10 121.4 125.8
N2 C26 C27 107.3 107.9
N2 C26 H6 110.0 109.7
N2 C26 H7 110.0 109.7
C26 C27 H4 108.3 109.3
C26 C27 H5 108.3 109.1
C27 C26 H6 110.0 109.8
C27 C26 H7 110.0 109.8
C11 C18 H22 109.5 110.8
N C11 C12 110.6 110.3
C10 N C11 108.1 110.1
N C11 H27 108.8 110.7
C11 C12 C13 120.2 120.0
C12 C11 H27 108.4 110.5
C3 C2 C1 120.1 120.2
C2 C3 H9 119.7 120.0
C3 C2 H10 120.0 119.9
C3 C9 C5 118.9 119.7
C10 N1 C18 112.6 108.3
N1 C18 C19 120.7 110.6
N1 C18 H22 111.5 110.6
N1 C10 N 112.3 114.1
N1 C10 C9 127.0 123.0
C2 C1 O 121.7 119.9
C2 C1 C4 121.0 120.2
C1 C2 H10 119.9 119.9
C17 C12 C13 119.2 120.1
C17 C16 C15 120.3 120.0
C16 C17 H30 120.2 120.0
C17 C16 H31 119.8 120.0
C18 C19 C24 116.0 120.0
C18 C19 C20 122.6 120.0
C19 C18 H22 110.8 110.6
C9 C10 N 120.4 122.9
C10 C9 C5 119.7 120.1
C9 C5 C4 119.1 119.8
C9 C5 O1 118.7 120.1
C12 C13 C14 122.8 120.0
C12 C13 H33 118.6 120.0
C1 C4 H18 119.8 120.0
C16 C15 C14 122.1 120.0
C16 C15 CL 121.8 120.0
C15 C16 H31 119.9 120.0
O1 C5 C4 122.2 120.1
C5 C4 H18 119.9 120.0
C5 O1 C6 120.4 117.0
C8 C6 C7 113.1 109.5
C8 C6 H11 108.0 109.5
O1 C6 C7 108.8 109.5
O1 C6 H11 109.1 109.4
C24 C19 C20 121.0 120.0
C19 C24 C23 119.1 120.0
C19 C24 H23 120.4 120.0
C19 C20 C21 120.4 120.0
C19 C20 H26 119.8 120.0
C24 C23 C22 118.6 120.0
C23 C24 H23 120.5 120.0
C24 C23 H24 120.7 120.0
C13 C14 H32 121.9 120.0
CL C15 C14 116.1 120.0
C15 C14 H32 122.0 120.0
C7 C6 H11 108.1 109.5
C6 C7 H15 109.5 109.5
C6 C7 H16 109.5 109.4
C6 C7 H17 109.5 109.5
C20 C21 H25 121.7 120.0
C23 C22 CL1 118.0 120.0
C22 C23 H24 120.7 120.0
H1 C29 H2 109.5 109.6
H4 C27 H5 109.5 109.2
H6 C26 H7 109.5 109.8
H12 C8 H13 109.5 109.5
H12 C8 H14 109.5 109.5
H13 C8 H14 109.4 109.4
H15 C7 H16 109.5 109.5
H15 C7 H17 109.5 109.5
H16 C7 H17 109.5 109.5
H19 C H20 109.4 109.4
H19 C H21 109.5 109.5
H20 C H21 109.5 109.5

Torsion Angles for NUT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 C28 C29 H1 305.9 47.5
O2 C28 C29 H2 64.4 287.2
O2 C28 N3 C27 182.9 184.3
O2 C28 N3 H3 2.9 4.3
C28 C29 N2 C26 322.4 43.1
H1 C29 C28 H2 241.5 120.4
N3 C28 C29 H1 125.6 227.4
N3 C28 C29 H2 244.1 107.1
C28 N3 C27 C26 19.7 338.0
C27 N3 C28 H3 180.0 180.0
C28 N3 C27 H4 140.3 98.4
C28 N3 C27 H5 259.0 217.8
C29 N2 C25 N1 186.5 350.7
C25 N2 C29 C26 184.9 179.7
C29 N2 C26 C27 58.3 298.2
C29 N2 C26 H6 178.0 57.9
C29 N2 C26 H7 298.7 178.6
N2 C25 O3 N1 179.5 180.4
O3 C25 N2 C26 192.4 349.9
O3 C25 N1 C18 225.2 186.2
O3 C25 N1 C10 23.1 6.5
C28 N3 C27 H3 180.0 180.0
N2 C26 C27 N3 311.9 46.9
C26 C27 N3 H4 239.3 239.5
C26 C27 N3 H5 120.6 120.2
N3 C27 C26 H6 192.2 287.3
N3 C27 C26 H7 71.5 166.5
H4 C27 N3 H5 241.3 240.7
C29 N2 C25 C26 174.6 180.4
O3 C25 N2 N1 180.5 179.6
N2 C25 N1 C18 45.7 5.8
N2 C25 N1 C10 203.6 186.2
C25 N2 C26 C27 233.2 118.5
C25 N2 C26 H6 352.8 238.2
C25 N2 C26 H7 113.5 358.9
O3 C25 N1 N2 179.5 180.4
N1 C25 N2 C26 11.8 170.3
C10 N1 C25 C18 157.9 180.4
C25 N1 C18 C19 246.5 298.5
C25 N1 C18 H22 19.2 61.5
C25 N1 C10 N 219.4 179.9
C25 N1 C10 C9 33.7 360.0
N3 C27 C26 N2 311.9 46.9
C26 N2 C25 N1 11.8 170.3
N2 C26 C27 H4 191.2 286.5
N2 C26 C27 H5 72.5 167.1
C27 C26 N2 H6 240.3 240.3
C27 C26 N2 H7 119.7 119.6
H6 C26 N2 H7 239.3 239.3
C26 C27 N3 H3 199.7 157.9
N3 C27 C26 H4 120.7 120.4
N3 C27 C26 H5 239.3 239.8
N2 C26 C27 H6 119.7 119.6
N2 C26 C27 H7 240.3 240.5
H4 C27 C26 H5 118.7 119.4
H6 C26 C27 H7 120.7 120.9
C10 N C11 C18 341.0 359.9
N1 C18 C11 H22 245.4 241.5
C19 C18 C11 H22 121.1 123.1
N C11 C18 H22 140.9 118.7
N C11 C12 C13 32.0 214.7
C12 C11 N H27 119.0 122.6
N1 C10 N C11 1.5 359.9
C9 C10 N C11 186.8 179.9
C12 C11 C18 H22 263.4 237.1
C10 N C11 C12 214.1 241.3
N C11 C12 H27 240.8 237.3
C17 C12 C11 C13 179.7 180.2
C11 C12 C13 C14 178.0 179.7
C11 C12 C13 H33 358.0 359.9
C2 C3 C9 C5 359.7 0.2
C3 C2 C1 O 179.4 180.0
C3 C2 C1 C4 358.1 359.8
C1 C2 C3 H10 180.0 179.9
C3 C9 C10 N 31.1 301.1
C10 C9 C3 C5 180.8 179.8
C3 C9 C5 C4 0.2 359.8
C3 C9 C5 O1 179.9 179.8
C25 N1 C18 C10 159.7 180.3
C11 C18 N1 H22 112.8 118.6
C18 N1 C10 N 19.4 0.3
C18 N1 C10 C9 193.7 180.3
N1 C18 C19 C24 163.2 141.4
N1 C18 C19 C20 335.7 321.2
C19 C18 N1 H22 227.3 237.0
C25 N1 C10 C18 200.0 179.7
C10 N1 C18 C19 86.8 118.2
C10 N1 C18 H22 219.5 241.1
C9 C10 N1 N 174.3 180.0
N1 C10 C9 C5 38.1 300.9
C1 C2 C3 H9 181.2 180.0
C3 C2 C1 H10 180.0 180.1
C2 C1 C4 H18 181.8 180.2
C11 C12 C17 C13 180.3 179.8
C17 C12 C11 H27 330.9 157.6
C17 C12 C13 C14 358.3 359.6
C17 C12 C13 H33 178.3 179.7
C16 C17 C12 C13 0.4 0.2
C17 C16 C15 C14 0.3 0.0
C17 C16 C15 CL 179.7 180.0
C15 C16 C17 H31 180.0 180.0
C11 C18 C19 H22 239.8 236.8
N1 C18 C19 H22 133.0 122.9
C24 C19 C18 C20 187.5 180.2
C18 C19 C24 C23 174.5 180.0
C18 C19 C24 H23 354.5 0.1
C18 C19 C20 C21 186.7 179.7
C18 C19 C20 H26 6.7 359.9
C10 N C11 H27 95.1 118.7
N C10 N1 C18 19.4 0.3
N1 C10 N C9 174.7 180.0
N C10 C9 C5 211.9 120.9
C3 C9 C10 C5 179.2 180.2
C9 C10 N1 C18 193.7 180.3
N1 C10 C9 N 186.1 180.0
C10 C9 C5 C4 179.4 180.0
C10 C9 C5 O1 359.1 360.0
C5 C9 C10 N 211.9 120.9
O1 C5 C9 C4 179.7 180.0
C9 C5 C4 H18 179.1 180.0
C9 C5 O1 C6 174.7 174.3
C13 C12 C11 H27 151.2 337.4
C12 C13 C14 H32 182.2 180.3
C2 C1 O C4 178.7 179.8
O C1 C2 H10 359.4 359.9
O C1 C4 H18 0.5 0.0
C2 C1 C4 O 181.3 180.2
C4 C1 C2 H10 178.1 179.7
C5 C4 C1 H18 180.0 180.0
C15 C16 C17 H30 180.3 180.0
C17 C16 C15 H31 180.0 180.0
CL C15 C16 C14 179.4 180.0
C16 C15 C14 H32 178.5 179.9
C2 C1 C4 C5 1.8 0.3
C9 C5 C4 O1 179.7 180.0
C1 C4 C5 H18 180.0 180.0
C4 C5 O1 C6 354.4 354.2
C9 C5 O1 C4 180.3 180.0
O1 C5 C4 H18 359.4 360.0
C5 O1 C6 C7 207.3 213.9
C5 O1 C6 H11 325.1 333.9
O1 C6 C8 C7 121.6 120.0
O1 C6 C8 H11 241.3 240.0
C7 C6 C8 H11 119.7 120.0
C8 C6 C7 H15 180.0 180.0
C8 C6 C7 H16 300.0 300.0
C8 C6 C7 H17 60.0 60.0
C6 O1 C5 C4 354.4 354.2
C8 C6 O1 C7 235.8 240.0
C8 C6 O1 H11 118.1 120.0
C7 C6 O1 H11 242.2 240.0
O1 C6 C7 H15 58.0 60.0
O1 C6 C7 H16 178.0 180.0
O1 C6 C7 H17 298.0 300.0
C18 C19 C24 C20 172.6 179.8
C24 C19 C18 H22 30.2 18.5
C24 C19 C20 C21 358.9 359.5
C24 C19 C20 H26 178.8 179.7
C19 C24 C23 C22 359.0 0.0
C23 C24 C19 H23 180.0 179.9
C19 C24 C23 H24 179.0 180.0
C18 C19 C20 C24 187.9 180.2
C20 C19 C18 H22 202.7 198.3
C20 C19 C24 C23 1.9 0.2
C20 C19 C24 H23 181.9 180.3
C19 C20 C21 H25 179.5 180.2
C23 C24 C19 C20 1.9 0.2
C19 C24 C23 H23 180.0 180.1
C24 C23 C22 CL1 184.1 180.0
C22 C23 C24 H24 180.0 180.0
C12 C13 C14 H33 180.0 180.2
C15 C14 C13 H32 180.0 180.2
C12 C13 C14 C15 2.2 0.5
C16 C15 C14 CL 179.4 180.0
C14 C15 C16 H31 180.3 180.0
C13 C14 C15 H32 180.0 179.8
C16 C15 CL C14 180.6 180.0
CL C15 C16 H31 359.7 360.0
CL C15 C14 H32 359.1 359.9
C8 C6 C7 H11 240.4 240.0
O1 C6 C7 H11 118.4 120.0
H15 C7 C6 H16 240.0 240.0
H15 C7 C6 H17 120.0 120.0
H16 C7 C6 H17 240.0 240.0
C19 C20 C21 H26 180.0 180.2
C22 C23 C24 H23 179.0 180.0
C24 C23 C22 H24 180.0 180.0
C19 C20 C21 C22 359.5 0.5
C21 C22 C23 H24 179.3 180.1
CL1 C22 C23 H24 4.0 0.0
C28 C29 H1 H2 117.7 239.5
H1 C29 N2 C26 201.7 162.9
C28 C29 H2 H1 242.3 120.4
H2 C29 N2 C26 83.2 283.1
C28 N3 H3 C27 180.0 180.0
H3 N3 C27 C26 199.7 157.9
H3 N3 C27 H4 320.3 278.4
H3 N3 C27 H5 79.1 37.7
N3 C27 H4 C26 236.0 238.7
H4 C27 N3 H3 320.3 278.4
N3 C27 H4 H5 118.0 119.3
C26 C27 H4 H5 242.1 240.7
H4 C27 C26 H6 71.5 166.9
H4 C27 C26 H7 310.8 46.1
N3 C27 H5 C26 124.0 121.2
H5 C27 N3 H3 79.1 37.7
N3 C27 H5 H4 242.0 240.6
C26 C27 H5 H4 117.9 119.5
H5 C27 C26 H6 312.9 47.5
H5 C27 C26 H7 192.2 286.7
N2 C26 H6 C27 242.0 241.5
N2 C26 H6 H7 121.0 120.6
H6 C26 C27 H4 71.5 166.9
H6 C26 C27 H5 312.9 47.5
C27 C26 H6 H7 239.0 239.1
N2 C26 H7 C27 118.0 118.4
N2 C26 H7 H6 239.0 239.3
H7 C26 C27 H4 310.8 46.1
H7 C26 C27 H5 192.2 286.7
C27 C26 H7 H6 121.0 120.9
H9 C3 C2 C1 181.2 180.0
H9 C3 C2 H10 1.2 0.0
H9 C3 C9 C5 179.7 180.2
C3 C2 H10 C1 180.0 179.9
H10 C2 C3 H9 1.2 0.0
H10 C2 C1 O 359.4 359.9
H10 C2 C1 C4 178.1 179.7
C8 C6 H11 C7 122.8 120.1
O1 C6 H11 C7 241.8 240.0
H11 C6 C7 H15 299.6 300.0
H11 C6 C7 H16 59.6 60.0
H11 C6 C7 H17 179.6 180.0
H12 C8 C6 C7 58.4 300.0
H12 C8 C6 H11 298.7 180.0
H13 C8 H12 H14 120.0 120.0
H13 C8 C6 C7 178.4 60.0
H13 C8 C6 H11 58.8 300.0
H12 C8 H13 H14 240.0 240.0
H14 C8 C6 C7 298.4 180.0
H14 C8 C6 H11 178.7 60.0
H12 C8 H14 H13 120.0 120.0
H15 C7 C6 H11 299.6 300.0
C6 C7 H15 H16 120.0 120.0
C6 C7 H15 H17 240.0 240.0
H16 C7 H15 H17 120.0 120.0
H16 C7 C6 H11 59.6 60.0
C6 C7 H16 H15 240.0 240.0
C6 C7 H16 H17 120.0 120.0
H15 C7 H16 H17 240.0 240.0
H17 C7 C6 H11 179.6 180.0
C6 C7 H17 H15 120.1 120.0
C6 C7 H17 H16 240.0 240.0
H15 C7 H17 H16 120.0 120.0
H20 C H19 H21 120.0 120.0
H19 C H20 H21 240.0 240.0
H19 C H21 H20 120.0 120.0
N1 C18 H22 C19 222.5 237.0
H22 C18 C19 C24 30.2 18.5
H22 C18 C19 C20 202.7 198.3
H23 C24 C19 C20 181.9 180.3
C19 C24 H23 C23 180.0 179.9
H23 C24 C23 C22 179.0 180.0
H23 C24 C23 H24 359.0 359.9
C24 C23 H24 C22 180.0 180.0
H24 C23 C24 H23 359.0 359.9
H24 C23 C22 CL1 4.0 0.0
C19 C20 H26 C21 180.0 179.8
H26 C20 C21 H25 359.5 0.0
H27 C11 C18 H22 25.7 359.8
N C11 H27 C12 120.4 122.5
H27 C11 C12 C13 151.2 337.4
H30 C17 C12 C13 180.4 180.2
H30 C17 C16 C15 180.3 180.0
H30 C17 C16 H31 0.3 0.0
C17 C16 H31 C15 180.0 180.0
H31 C16 C17 H30 0.3 0.0
H31 C16 C15 C14 180.3 180.0
H31 C16 C15 CL 359.7 360.0
C12 C13 H33 C14 180.0 179.8
H33 C13 C14 H32 2.2 0.1