PDB Chemical Component NUJ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NUJ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C4 1.411 1.429
C4 C3 1.525 1.538
C4 C5 1.525 1.539
C3 C2 1.538 1.538
C5 C2 1.540 1.537
C1 N1 1.467 1.466
C2 N1 1.453 1.465
C9 C8 1.499 1.506
C7 C8 1.381 1.381
C7 C6 1.401 1.396
N1 C6 1.408 1.386
C8 N2 1.342 1.326
C6 N3 1.347 1.330
N2 C10 1.333 1.317
N3 C10 1.337 1.318
C10 C11 1.495 1.507
C4 H1 1.100 1.089
C5 H2 1.100 1.090
C5 H3 1.100 1.090
C7 H4 1.080 1.080
C1 H5 1.100 1.090
C1 H6 1.100 1.089
C1 H7 1.100 1.090
C11 H8 1.100 1.091
C11 H9 1.100 1.090
C11 H10 1.100 1.090
C2 H11 1.100 1.090
C3 H12 1.100 1.089
C3 H13 1.100 1.090
C9 H14 1.100 1.089
C9 H15 1.100 1.091
C9 H16 1.100 1.090
O1 H17 0.950 0.967

Bond Angles for NUJ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C4 H1 110.7 112.9
C5 C4 C3 89.1 87.1
C4 C3 C2 88.7 87.1
C3 C4 H1 109.0 113.6
C4 C3 H12 114.4 113.6
C4 C3 H13 114.4 113.6
C4 C5 C2 88.7 87.1
C5 C4 H1 109.0 113.6
C4 C5 H2 114.4 113.6
C4 C5 H3 114.4 113.6
C3 C2 H11 108.7 113.7
C2 C5 H2 114.4 113.6
C2 C5 H3 114.4 113.6
C5 C2 H11 108.7 113.6
C9 C8 N2 117.0 120.4
C7 C8 N2 120.7 119.2
C8 C7 H4 121.1 120.8
N1 C6 N3 117.5 120.5
C8 N2 C10 118.5 121.0
C6 N3 C10 117.6 120.6
N3 C10 C11 117.6 119.0
C10 C11 H8 109.5 109.5
C10 C11 H9 109.5 109.5
C10 C11 H10 109.5 109.5
H2 C5 H3 109.5 112.9
H5 C1 H6 109.5 109.5
H5 C1 H7 109.5 109.5
H6 C1 H7 109.5 109.5
H8 C11 H9 109.4 109.5
H8 C11 H10 109.5 109.4
H9 C11 H10 109.5 109.5
H12 C3 H13 109.5 112.9
H14 C9 H15 109.5 109.5
H14 C9 H16 109.5 109.5
H15 C9 H16 109.5 109.5

Torsion Angles for NUJ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C4 O1 H1 126.8 131.3
O1 C4 C3 H12 256.4 254.5
O1 C4 C3 H13 23.8 25.5
C5 C4 O1 H1 232.8 228.8
O1 C4 C5 H2 336.5 334.6
O1 C4 C5 H3 104.0 105.5
O1 C4 C3 H1 232.4 229.1
C3 C4 C5 C2 342.5 334.6
C5 C4 C3 H1 109.8 114.5
C3 C4 C5 H2 98.8 89.1
C3 C4 C5 H3 226.2 220.1
C4 C3 C2 H11 233.5 220.0
H12 C3 C4 H13 232.6 229.0
O1 C4 C5 H1 127.9 130.9
C5 C4 C3 C2 17.5 25.4
C3 C4 C5 H1 250.2 245.5
C5 C4 C3 H12 133.8 140.0
C5 C4 C3 H13 261.2 270.9
C2 C5 C4 H2 243.7 245.4
C2 C5 C4 H3 116.3 114.5
C4 C5 C2 H11 126.5 140.1
H2 C5 C4 H3 232.6 229.1
C2 C3 C4 H1 267.7 270.9
C4 C3 C2 H12 116.3 114.6
C4 C3 C2 H13 243.7 245.5
C3 C2 C5 H2 261.1 270.9
C3 C2 C5 H3 133.7 140.0
C5 C2 C3 H11 109.1 114.6
C2 C5 C4 C3 342.5 334.6
C4 C3 C2 C5 342.6 334.6
C2 C5 C4 H1 92.3 89.1
C4 C5 C2 H2 116.3 114.6
C4 C5 C2 H3 243.7 245.4
C3 C2 C5 H11 250.9 245.3
H2 C5 C2 H3 127.4 130.9
C7 C8 C9 N2 180.1 180.0
C9 C8 C7 H4 359.9 360.0
C9 C8 N2 C10 180.1 180.0
C9 C8 C7 N2 179.9 180.0
C7 C8 N2 C10 359.9 360.0
C7 C6 N3 C10 0.2 0.0
N1 C6 N3 C10 180.0 180.0
N2 C8 C7 H4 180.1 180.0
C6 N3 C10 C11 180.0 180.0
N2 C10 C11 H8 0.0 270.0
N2 C10 C11 H9 120.0 30.0
N2 C10 C11 H10 240.0 150.1
C8 N2 C10 N3 0.1 0.0
N3 C10 C11 H8 179.9 90.0
N3 C10 C11 H9 299.8 210.0
N3 C10 C11 H10 59.8 330.0
C8 N2 C10 C11 179.9 180.0
H8 C11 C10 H9 240.0 240.0
H8 C11 C10 H10 120.1 120.0
H9 C11 C10 H10 240.0 240.0
C5 C4 H1 C3 264.2 262.5
H1 C4 C3 C2 267.7 270.9
H1 C4 C3 H12 24.0 25.4
H1 C4 C3 H13 151.4 156.4
H1 C4 C5 C2 92.3 89.1
H1 C4 C5 H2 208.6 203.7
H1 C4 C5 H3 336.0 334.6
H2 C5 C4 C3 98.8 89.1
C4 C5 H2 C2 259.8 262.5
H2 C5 C4 H1 208.6 203.7
C4 C5 H2 H3 129.9 131.3
C2 C5 H2 H3 230.1 228.8
H2 C5 C2 H11 10.2 25.5
H3 C5 C4 C3 226.2 220.1
C4 C5 H3 C2 100.2 97.5
H3 C5 C4 H1 336.0 334.6
C4 C5 H3 H2 230.1 228.7
C2 C5 H3 H2 129.9 131.2
H3 C5 C2 H11 242.8 254.6
H4 C7 C8 N2 180.1 180.0
H6 C1 H5 H7 120.0 120.1
H5 C1 H6 H7 240.0 240.0
H5 C1 H7 H6 120.0 120.0
C10 C11 H8 H9 120.0 120.0
C10 C11 H8 H10 240.0 240.0
H9 C11 H8 H10 120.0 120.0
C10 C11 H9 H8 240.0 240.0
C10 C11 H9 H10 120.0 120.0
H8 C11 H9 H10 240.0 240.1
C10 C11 H10 H8 120.0 120.0
C10 C11 H10 H9 240.0 240.0
H8 C11 H10 H9 120.0 120.0
H11 C2 C5 H2 10.2 25.5
H11 C2 C5 H3 242.8 254.6
C4 C3 H12 C2 259.7 262.5
H12 C3 C4 H1 24.0 25.4
C4 C3 H12 H13 129.9 131.3
H12 C3 C2 H11 117.2 105.4
C4 C3 H13 C2 100.3 97.5
H13 C3 C4 H1 151.4 156.4
C4 C3 H13 H12 230.1 228.7
H13 C3 C2 H11 349.8 334.5
H14 C9 C8 N2 360.0 270.0
H15 C9 H14 H16 120.0 120.0
H15 C9 C8 N2 120.0 30.0
H14 C9 H15 H16 240.0 240.0
H16 C9 C8 N2 240.0 150.0
H14 C9 H16 H15 120.0 120.0
H17 O1 C4 H1 53.2 48.7