PDB Chemical Component NU9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NU9

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
F01 C02 1.331 1.399
C02 F03 1.328 1.399
C02 F04 1.327 1.399
C02 C05 1.486 1.507
C05 N06 1.355 1.310
C05 O09 1.382 1.337
N06 C07 1.398 1.352
C07 N08 1.359 1.308
C07 C10 1.390 1.483
N08 O09 1.385 1.213
C10 C11 1.405 1.394
C10 C15 1.403 1.391
C11 C12 1.402 1.382
C12 C13 1.399 1.380
C13 C14 1.399 1.397
C14 C15 1.401 1.394
C14 C16 1.488 1.479
C16 O17 1.222 1.216
C16 N18 1.426 1.347
N18 C19 1.438 1.466
C19 C20 1.547 1.530
C20 C21 1.505 1.532
C20 C25 1.504 1.532
C20 C26 1.507 1.506
C21 C22 1.535 1.531
C22 O23 1.439 1.429
O23 C24 1.436 1.429
C24 C25 1.533 1.531
C26 N27 1.482 1.288
C26 S30 1.543 1.709
N27 C28 1.631 1.326
C28 C29 1.444 1.348
C28 C31 1.393 1.484
C29 S30 1.615 1.762
C31 C32 1.403 1.393
C31 C36 1.405 1.394
C32 C33 1.400 1.380
C33 C34 1.399 1.383
C34 C35 1.403 1.383
C35 C36 1.400 1.380
C11 H11 1.080 1.080
C12 H12 1.080 1.080
C13 H13 1.080 1.080
C15 H15 1.080 1.080
N18 HN18 1.000 0.970
C19 H19 1.100 1.090
C19 H19A 1.100 1.089
C21 H21 1.100 1.089
C21 H21A 1.100 1.090
C22 H22 1.100 1.091
C22 H22A 1.100 1.089
C24 H24 1.100 1.090
C24 H24A 1.100 1.090
C25 H25 1.100 1.090
C25 H25A 1.100 1.090
C29 H29 1.080 1.080
C32 H32 1.080 1.080
C33 H33 1.080 1.080
C34 H34 1.080 1.080
C35 H35 1.080 1.080
C36 H36 1.080 1.080

Bond Angles for NU9

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
F01 C02 F03 110.1 109.4
F01 C02 F04 109.4 109.5
F01 C02 C05 109.7 109.5
F03 C02 F04 109.9 109.5
F03 C02 C05 108.5 109.5
F04 C02 C05 109.3 109.5
C02 C05 N06 125.8 126.4
C02 C05 O09 126.1 126.4
N06 C05 O09 108.2 107.1
C05 N06 C07 108.3 105.6
C05 O09 N08 107.7 110.0
N06 C07 N08 107.5 107.2
N06 C07 C10 125.6 126.4
N08 C07 C10 126.6 126.4
C07 N08 O09 108.3 110.1
C07 C10 C11 120.3 120.1
C07 C10 C15 120.4 120.0
C11 C10 C15 119.3 119.9
C10 C11 C12 120.1 120.2
C10 C11 H11 120.0 119.9
C10 C15 C14 120.3 119.7
C10 C15 H15 119.9 120.2
C11 C12 C13 120.4 120.3
C12 C11 H11 119.9 119.9
C11 C12 H12 119.8 119.8
C12 C13 C14 119.5 120.1
C13 C12 H12 119.8 119.9
C12 C13 H13 120.3 119.9
C13 C14 C15 120.3 119.9
C13 C14 C16 120.4 120.0
C14 C13 H13 120.2 120.0
C15 C14 C16 119.2 120.1
C14 C15 H15 119.8 120.1
C14 C16 O17 122.1 120.0
C14 C16 N18 115.1 120.0
O17 C16 N18 122.8 120.0
C16 N18 C19 124.4 120.0
C16 N18 HN18 117.8 120.1
N18 C19 C20 117.1 109.5
C19 N18 HN18 117.8 119.9
N18 C19 H19 107.5 109.4
N18 C19 H19A 107.5 109.5
C19 C20 C21 102.6 109.5
C19 C20 C25 103.5 109.5
C19 C20 C26 101.5 109.6
C20 C19 H19 107.5 109.5
C20 C19 H19A 107.5 109.5
C21 C20 C25 111.9 109.0
C21 C20 C26 116.1 109.6
C20 C21 C22 112.6 109.2
C20 C21 H21 108.7 109.5
C20 C21 H21A 108.7 109.5
C25 C20 C26 118.2 109.6
C20 C25 C24 112.4 109.2
C20 C25 H25 108.7 109.5
C20 C25 H25A 108.7 109.5
C20 C26 N27 124.6 124.8
C20 C26 S30 128.6 124.7
C21 C22 O23 113.5 109.4
C22 C21 H21 108.7 109.5
C22 C21 H21A 108.7 109.5
C21 C22 H22 108.5 109.5
C21 C22 H22A 108.4 109.5
C22 O23 C24 114.3 114.1
O23 C22 H22 108.5 109.4
O23 C22 H22A 108.5 109.5
O23 C24 C25 113.8 109.4
O23 C24 H24 108.4 109.5
O23 C24 H24A 108.4 109.5
C25 C24 H24 108.4 109.5
C25 C24 H24A 108.4 109.5
C24 C25 H25 108.7 109.5
C24 C25 H25A 108.7 109.6
N27 C26 S30 106.8 110.5
C26 N27 C28 109.8 117.1
C26 S30 C29 108.1 90.4
N27 C28 C29 107.1 114.1
N27 C28 C31 124.5 123.0
C29 C28 C31 128.5 123.0
C28 C29 S30 108.3 107.9
C28 C29 H29 125.9 126.1
C28 C31 C32 121.4 120.1
C28 C31 C36 119.3 120.1
S30 C29 H29 125.9 126.1
C32 C31 C36 119.2 119.8
C31 C32 C33 120.5 119.9
C31 C32 H32 119.8 120.1
C31 C36 C35 120.4 119.9
C31 C36 H36 119.8 120.1
C32 C33 C34 120.1 120.1
C33 C32 H32 119.8 120.0
C32 C33 H33 120.0 119.9
C33 C34 C35 119.7 120.3
C34 C33 H33 119.9 120.0
C33 C34 H34 120.1 119.8
C34 C35 C36 120.1 120.1
C35 C34 H34 120.2 119.9
C34 C35 H35 119.9 119.9
C36 C35 H35 119.9 120.0
C35 C36 H36 119.8 120.0
H19 C19 H19A 109.5 109.4
H21 C21 H21A 109.5 109.6
H22 C22 H22A 109.5 109.5
H24 C24 H24A 109.4 109.5
H25 C25 H25A 109.5 109.5

Torsion Angles for NU9

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
F03 C02 F01 F04 239.2 240.0
F03 C02 F01 C05 119.3 120.0
F04 C02 F01 C05 240.1 240.0
F01 C02 C05 N06 6.6 89.9
F01 C02 C05 O09 185.2 269.7
F01 C02 F03 F04 120.5 120.0
F01 C02 F03 C05 239.9 240.0
F04 C02 F03 C05 119.4 120.0
F03 C02 C05 N06 246.3 330.0
F03 C02 C05 O09 64.9 149.7
F01 C02 F04 F03 239.1 240.0
F01 C02 F04 C05 120.2 120.0
F03 C02 F04 C05 241.1 240.0
F04 C02 C05 N06 126.5 210.0
F04 C02 C05 O09 305.1 29.7
F01 C02 C05 F03 120.3 120.0
F01 C02 C05 F04 240.0 240.0
F03 C02 C05 F04 119.8 120.0
N06 C05 C02 O09 181.4 180.3
C02 C05 N06 C07 178.3 180.0
C02 C05 O09 N08 180.3 179.8
C02 C05 N06 O09 178.8 179.8
N06 C05 O09 N08 359.1 359.6
C05 N06 C07 N08 1.7 0.0
C05 N06 C07 C10 176.4 180.0
C02 C05 O09 N06 181.2 180.2
O09 C05 N06 C07 359.5 0.2
C07 N08 O09 C05 1.9 0.4
C07 N06 C05 O09 359.5 0.2
N08 C07 N06 C10 185.4 180.0
N06 C07 N08 O09 357.7 359.7
N06 C07 C10 C11 5.2 360.0
N06 C07 C10 C15 185.8 179.7
C05 O09 N08 C07 1.9 0.4
N06 C07 N08 C10 174.6 180.0
N08 C07 C10 C11 178.8 180.0
N08 C07 C10 C15 359.4 359.7
N06 C07 C10 N08 186.4 180.0
C10 C07 N08 O09 183.2 179.8
C11 C10 C07 C15 179.4 180.3
C07 C10 C11 C12 180.4 180.0
C07 C10 C11 H11 0.5 0.0
C07 C10 C15 C14 180.1 179.6
C07 C10 C15 H15 0.2 0.0
O09 N08 C07 C10 183.2 179.8
C07 C10 C11 C15 180.6 179.7
C11 C10 C15 C14 0.8 359.4
C11 C10 C15 H15 180.8 179.8
C10 C11 C12 C13 359.9 0.0
C12 C11 C10 H11 180.0 180.0
C10 C11 C12 H12 179.9 180.1
C07 C10 C15 C11 179.4 180.3
C15 C10 C11 C12 359.8 0.3
C15 C10 C11 H11 179.8 180.3
C13 C14 C15 C10 358.9 0.7
C10 C15 C14 C16 180.8 180.4
C14 C15 C10 H15 180.0 179.6
C12 C11 C10 C15 359.8 0.3
C10 C11 C12 H11 180.0 180.0
C11 C12 C13 C14 359.7 360.0
C13 C12 C11 H12 180.0 180.0
C11 C12 C13 H13 179.7 180.0
C13 C12 C11 H11 179.9 180.0
C11 C12 C13 H12 180.0 180.0
C12 C13 C14 C15 0.9 359.7
C12 C13 C14 C16 178.9 180.0
C14 C13 C12 H13 180.0 179.9
C10 C15 C14 C13 358.9 0.7
C14 C13 C12 H12 179.7 180.0
C12 C13 C14 H13 180.0 180.1
C15 C14 C13 C16 182.0 179.7
C13 C14 C15 H15 178.9 180.3
C13 C14 C16 O17 56.0 180.0
C13 C14 C16 N18 236.6 0.1
C10 C15 C14 H15 180.0 180.4
C13 C14 C15 C16 178.1 180.3
C15 C14 C13 H13 180.9 179.6
C15 C14 C16 O17 234.0 0.3
C15 C14 C16 N18 54.7 180.4
C13 C14 C16 C15 181.9 179.7
C16 C14 C13 H13 358.9 359.9
C16 C14 C15 H15 0.8 360.0
O17 C16 C14 N18 179.4 179.9
C14 C16 N18 C19 179.5 180.0
C14 C16 N18 HN18 359.5 360.0
C14 C16 O17 N18 180.7 180.1
O17 C16 N18 C19 0.1 0.1
O17 C16 N18 HN18 180.1 180.0
C14 C16 N18 O17 179.4 179.9
C16 N18 C19 C20 209.7 180.0
C19 N18 C16 HN18 180.0 180.1
C16 N18 C19 H19 330.8 300.0
C16 N18 C19 H19A 88.6 59.9
C16 N18 C19 HN18 180.0 179.9
N18 C19 C20 C21 56.6 180.0
N18 C19 C20 C25 173.1 299.5
N18 C19 C20 C26 296.2 59.8
C20 C19 N18 H19 238.9 240.0
C20 C19 N18 H19A 121.1 120.1
H19 C19 N18 H19A 242.2 240.1
C20 C19 N18 HN18 29.7 0.0
N18 C19 C20 H19 121.1 119.9
N18 C19 C20 H19A 238.9 240.0
C21 C20 C19 C25 243.5 240.5
C21 C20 C19 C26 120.4 120.2
C19 C20 C21 C22 156.5 62.8
C19 C20 C21 H21 277.0 182.7
C19 C20 C21 H21A 36.1 303.0
C25 C20 C19 C26 237.0 239.7
C19 C20 C25 C24 199.4 297.2
C19 C20 C25 H25 319.8 57.1
C19 C20 C25 H25A 78.9 177.2
C19 C20 C26 N27 64.6 300.0
C19 C20 C26 S30 243.9 119.7
H19 C19 C20 H19A 117.8 120.0
C19 C20 C21 C25 110.4 119.8
C19 C20 C21 C26 250.2 239.8
C21 C20 C19 H19 295.5 60.1
C21 C20 C19 H19A 177.7 300.0
C25 C20 C21 C26 139.8 120.0
C21 C20 C25 C24 309.2 57.0
C21 C20 C25 H25 69.6 176.9
C21 C20 C25 H25A 188.8 297.0
C21 C20 C26 N27 314.1 179.8
C21 C20 C26 S30 133.5 359.6
C20 C21 C22 O23 4.5 57.7
C22 C21 C20 H21 239.5 240.1
C22 C21 C20 H21A 120.4 119.9
C20 C21 C22 H22 125.1 177.6
C20 C21 C22 H22A 243.9 297.6
H21 C21 C20 H21A 240.9 239.8
C19 C20 C25 C21 250.2 240.2
C19 C20 C25 C26 111.2 120.2
C25 C20 C19 H19 52.0 179.6
C25 C20 C19 H19A 294.2 59.5
C21 C20 C25 C26 221.1 240.1
C25 C20 C21 C22 46.1 303.0
C25 C20 C21 H21 166.6 62.9
C25 C20 C21 H21A 285.7 183.2
C25 C20 C26 N27 176.9 60.2
C25 C20 C26 S30 356.2 239.9
O23 C24 C25 C20 4.2 302.4
C20 C25 C24 H24 243.6 182.4
C20 C25 C24 H24A 124.8 62.4
C24 C25 C20 H25 239.6 240.1
C24 C25 C20 H25A 120.4 120.0
H25 C25 C20 H25A 240.9 239.9
C19 C20 C26 C21 110.4 120.2
C19 C20 C26 C25 247.7 239.8
C26 C20 C19 H19 175.1 299.8
C26 C20 C19 H19A 57.2 179.8
C21 C20 C26 C25 137.2 119.6
C26 C20 C21 C22 266.3 183.0
C26 C20 C21 H21 26.8 302.9
C26 C20 C21 H21A 145.9 63.2
C26 C20 C25 C24 88.1 176.9
C26 C20 C25 H25 208.6 296.9
C26 C20 C25 H25A 327.7 57.0
N27 C26 C20 S30 180.7 180.2
C20 C26 N27 C28 182.1 180.0
C20 C26 S30 C29 178.5 179.9
C22 C21 C20 C25 46.1 303.0
C22 C21 C20 C26 266.3 183.0
C20 C21 C22 H21 120.5 119.9
C20 C21 C22 H21A 239.5 240.1
C21 C22 O23 C24 306.5 298.8
O23 C22 C21 H22 239.4 240.1
O23 C22 C21 H22A 120.6 120.0
H21 C21 C22 H21A 119.1 120.2
H22 C22 C21 H22A 241.2 239.9
O23 C22 C21 H21 244.1 297.7
O23 C22 C21 H21A 125.0 177.5
C21 C22 O23 H22 120.6 119.9
C21 C22 O23 H22A 239.4 240.0
C22 O23 C24 C25 48.7 61.2
C22 O23 C24 H24 169.3 181.1
C22 O23 C24 H24A 288.0 301.2
H22 C22 O23 H22A 118.8 120.1
C20 C25 C24 O23 4.2 302.4
C24 O23 C22 H22 186.0 178.9
C24 O23 C22 H22A 67.1 58.8
C25 C24 O23 H24 239.3 240.0
C25 C24 O23 H24A 120.6 119.9
O23 C24 C25 H25 243.7 182.5
O23 C24 C25 H25A 124.6 62.3
H24 C24 O23 H24A 241.3 239.9
C24 C25 C20 C26 88.1 176.9
C20 C25 C24 H25 120.5 119.9
C20 C25 C24 H25A 239.6 240.1
O23 C24 C25 H24 120.6 120.0
O23 C24 C25 H24A 239.3 240.0
H24 C24 C25 H24A 118.7 120.1
H25 C25 C24 H25A 119.1 120.2
C20 C26 N27 S30 179.4 179.8
N27 C26 S30 C29 357.9 359.7
C26 N27 C28 C29 357.7 0.1
C26 N27 C28 C31 178.1 180.0
C20 C26 S30 N27 180.6 180.2
S30 C26 N27 C28 2.6 0.2
C28 C29 S30 C26 0.7 0.3
C26 S30 C29 H29 180.7 180.0
C28 N27 C26 S30 2.6 0.2
C29 C28 N27 C31 179.6 180.1
N27 C28 C29 S30 0.9 359.7
N27 C28 C29 H29 180.9 180.0
N27 C28 C31 C32 157.8 185.0
N27 C28 C31 C36 337.9 4.8
C26 S30 C29 C28 0.7 0.3
N27 C28 C29 C31 180.4 179.9
C29 C28 C31 C32 338.3 4.9
C29 C28 C31 C36 158.4 184.7
S30 C29 C28 H29 180.0 179.7
N27 C28 C31 C29 179.5 180.1
C31 C28 C29 S30 180.5 179.8
C31 C28 C29 H29 0.5 0.1
C32 C31 C28 C36 179.9 180.2
C28 C31 C32 C33 179.9 180.0
C28 C31 C32 H32 359.9 360.0
C28 C31 C36 C35 180.0 179.8
C28 C31 C36 H36 0.0 359.9
S30 C29 C28 C31 180.5 179.8
C28 C29 S30 H29 180.0 180.3
C28 C31 C32 C36 180.1 179.8
C32 C31 C36 C35 0.1 359.6
C32 C31 C36 H36 180.1 179.7
C31 C32 C33 C34 0.2 360.0
C33 C32 C31 H32 180.0 180.0
C31 C32 C33 H33 180.2 180.0
C28 C31 C36 C32 179.9 180.2
C36 C31 C32 C33 359.8 0.2
C36 C31 C32 H32 179.8 180.2
C34 C35 C36 C31 359.9 0.5
C31 C36 C35 H35 180.0 180.3
C35 C36 C31 H36 180.0 179.9
C33 C32 C31 C36 359.8 0.2
C31 C32 C33 H32 180.0 180.0
C32 C33 C34 C35 359.9 0.0
C34 C33 C32 H33 180.0 180.0
C32 C33 C34 H34 179.9 180.0
C34 C33 C32 H32 180.2 180.0
C32 C33 C34 H33 180.0 180.0
C33 C34 C35 C36 0.0 359.8
C35 C34 C33 H34 180.0 180.1
C33 C34 C35 H35 180.0 179.9
C31 C36 C35 C34 359.9 0.5
C35 C34 C33 H33 179.9 180.0
C33 C34 C35 H34 180.0 179.9
C36 C35 C34 H35 180.0 179.8
C34 C35 C36 H36 179.9 180.3
C31 C36 C35 H36 180.0 180.1
C36 C35 C34 H34 180.0 179.8
C34 C35 C36 H35 180.0 180.2
H11 C11 C10 C15 179.8 180.3
C10 C11 H11 C12 180.0 180.0
H11 C11 C12 C13 179.9 180.0
H11 C11 C12 H12 359.9 0.0
C11 C12 H12 C13 180.0 180.0
H12 C12 C11 H11 359.9 0.0
H12 C12 C13 C14 179.7 180.0
H12 C12 C13 H13 359.7 0.0
C12 C13 H13 C14 180.0 179.9
H13 C13 C12 H12 359.7 0.0
H13 C13 C14 C15 180.9 179.6
H13 C13 C14 C16 358.9 359.9
C10 C15 H15 C14 180.0 179.6
H15 C15 C14 C16 0.8 360.0
C16 N18 HN18 C19 180.0 180.1
HN18 N18 C19 C20 29.7 0.0
HN18 N18 C19 H19 150.8 120.0
HN18 N18 C19 H19A 268.6 240.0
N18 C19 H19 C20 233.1 240.0
H19 C19 N18 HN18 150.8 120.0
N18 C19 H19 H19A 116.5 120.0
H19 C19 C20 C21 295.5 60.1
H19 C19 C20 C25 52.0 179.6
H19 C19 C20 C26 175.1 299.8
C20 C19 H19 H19A 243.4 239.9
N18 C19 H19A C20 126.9 120.0
H19A C19 N18 HN18 268.6 240.0
N18 C19 H19A H19 243.5 240.1
H19A C19 C20 C21 177.7 300.0
H19A C19 C20 C25 294.2 59.5
H19A C19 C20 C26 57.2 179.8
C20 C19 H19A H19 116.6 120.1
H21 C21 C20 C25 166.6 62.9
H21 C21 C20 C26 26.8 302.9
C20 C21 H21 C22 237.2 240.3
C20 C21 H21 H21A 118.6 120.2
H21 C21 C22 O23 244.1 297.7
C22 C21 H21 H21A 241.4 239.8
H21 C21 C22 H22 4.7 57.6
H21 C21 C22 H22A 123.5 177.7
H21A C21 C20 C25 285.7 183.2
H21A C21 C20 C26 145.9 63.2
C20 C21 H21A C22 122.8 119.6
C20 C21 H21A H21 241.4 239.8
H21A C21 C22 O23 125.0 177.5
C22 C21 H21A H21 118.6 120.2
H21A C21 C22 H22 245.6 297.4
H21A C21 C22 H22A 4.4 57.5
C21 C22 H22 O23 236.3 240.1
H22 C22 C21 H21 4.7 57.6
H22 C22 C21 H21A 245.6 297.4
C21 C22 H22 H22A 118.2 120.1
H22 C22 O23 C24 186.0 178.9
O23 C22 H22 H22A 241.8 240.0
C21 C22 H22A O23 123.7 120.0
H22A C22 C21 H21 123.5 177.7
H22A C22 C21 H21A 4.4 57.5
C21 C22 H22A H22 241.8 240.0
H22A C22 O23 C24 67.1 58.8
O23 C22 H22A H22 118.2 120.0
O23 C24 H24 C25 236.1 240.1
O23 C24 H24 H24A 118.1 120.1
C25 C24 H24 H24A 242.0 240.0
H24 C24 C25 H25 123.1 62.5
H24 C24 C25 H25A 4.0 302.4
O23 C24 H24A C25 123.9 119.9
O23 C24 H24A H24 242.0 239.9
C25 C24 H24A H24 118.0 120.0
H24A C24 C25 H25 4.4 302.5
H24A C24 C25 H25A 245.3 182.3
H25 C25 C20 C26 208.6 296.9
C20 C25 H25 C24 237.3 240.3
C20 C25 H25 H25A 118.7 120.1
H25 C25 C24 H24 123.1 62.5
H25 C25 C24 H24A 4.4 302.5
C24 C25 H25 H25A 241.4 239.8
H25A C25 C20 C26 327.7 57.0
C20 C25 H25A C24 122.7 119.7
C20 C25 H25A H25 241.3 239.9
H25A C25 C24 H24 4.0 302.4
H25A C25 C24 H24A 245.3 182.3
C24 C25 H25A H25 118.6 120.2
H29 C29 C28 C31 0.5 0.1
C28 C29 H29 S30 180.0 179.7
H32 C32 C31 C36 179.8 180.2
C31 C32 H32 C33 180.0 180.0
H32 C32 C33 C34 180.2 180.0
H32 C32 C33 H33 0.2 360.0
C32 C33 H33 C34 180.0 180.0
H33 C33 C32 H32 0.2 360.0
H33 C33 C34 C35 179.9 180.0
H33 C33 C34 H34 359.9 360.0
C33 C34 H34 C35 180.0 180.1
H34 C34 C33 H33 359.9 360.0
H34 C34 C35 C36 180.0 179.8
H34 C34 C35 H35 0.0 360.0
C34 C35 H35 C36 180.0 179.8
H35 C35 C34 H34 0.0 360.0
H35 C35 C36 H36 359.9 0.1
C31 C36 H36 C35 180.0 179.9
H36 C36 C35 H35 359.9 0.1