PDB Chemical Component NTJ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NTJ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	P1	1.437	1.511
P1	N1	1.474	1.671
P1	O2	1.438	1.632
N1	C2	1.458	1.463
N1	C1	1.453	1.462
C2	H2C1	1.100	1.093
C2	H2C2	1.101	1.093
C2	H2C3	1.100	1.093
C1	H1C1	1.100	1.093
C1	H1C2	1.100	1.094
C1	H1C3	1.100	1.093
O2	C3	1.449	1.418
C3	C4	1.526	1.514
C3	H3C1	1.100	1.094
C3	H3C2	1.100	1.094
C4	H4C1	1.100	1.094
C4	H4C2	1.100	1.095
C4	H4C3	1.100	1.095
HP1	P1	1.420	1.412

Bond Angles for NTJ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	P1	N1	114.6	114.5
O1	P1	O2	112.6	109.6
N1	P1	O2	109.4	105.9
P1	N1	C2	123.6	117.5
P1	N1	C1	120.0	116.3
P1	O2	C3	116.1	118.4
C2	N1	C1	116.4	109.6
N1	C2	H2C1	109.4	110.1
N1	C2	H2C2	109.5	110.2
N1	C2	H2C3	109.5	110.2
N1	C1	H1C1	109.4	110.1
N1	C1	H1C2	109.5	110.2
N1	C1	H1C3	109.5	110.3
H2C1	C2	H2C2	109.5	108.7
H2C1	C2	H2C3	109.5	108.8
H2C2	C2	H2C3	109.4	108.7
H1C1	C1	H1C2	109.5	108.7
H1C1	C1	H1C3	109.5	108.8
H1C2	C1	H1C3	109.5	108.7
O2	C3	C4	116.2	109.0
O2	C3	H3C1	105.7	108.8
O2	C3	H3C2	107.3	108.8
C4	C3	H3C1	105.7	110.5
C4	C3	H3C2	107.3	110.5
C3	C4	H4C1	109.5	110.9
C3	C4	H4C2	109.5	110.6
C3	C4	H4C3	109.5	110.6
H3C1	C3	H3C2	114.9	109.2
H4C1	C4	H4C2	109.5	108.8
H4C1	C4	H4C3	109.5	108.8
H4C2	C4	H4C3	109.4	106.9

Torsion Angles for NTJ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N1	P1	O1	O2	126.0	118.9
O1	P1	N1	C2	31.4	312.1
O1	P1	N1	C1	209.3	84.9
O1	P1	O2	C3	34.1	175.4
O1	P1	N1	O2	232.4	239.0
N1	P1	O2	C3	265.3	51.3
C2	N1	P1	C1	182.1	227.1
P1	N1	C2	H2C1	30.6	84.2
P1	N1	C2	H2C2	270.6	324.2
P1	N1	C2	H2C3	150.6	204.2
P1	N1	C1	H1C1	281.2	72.6
P1	N1	C1	H1C2	161.2	312.6
P1	N1	C1	H1C3	41.2	192.6
O1	P1	O2	N1	128.7	124.1
O2	P1	N1	C2	159.0	73.1
O2	P1	N1	C1	336.9	205.9
P1	O2	C3	C4	69.8	180.0
P1	O2	C3	H3C1	312.9	300.6
P1	O2	C3	H3C2	189.8	59.4
C2	N1	P1	O2	159.0	73.1
P1	N1	C2	C1	177.9	135.8
C2	N1	C1	H1C1	99.2	208.9
C2	N1	C1	H1C2	339.3	89.0
C2	N1	C1	H1C3	219.2	329.0
H2C1	C2	N1	H2C2	120.0	120.0
H2C1	C2	N1	H2C3	240.0	240.0
H2C2	C2	N1	H2C3	120.0	120.0
C1	N1	P1	O2	336.9	205.9
P1	N1	C1	C2	182.0	223.7
C1	N1	C2	H2C1	212.6	308.4
C1	N1	C2	H2C2	92.6	188.4
C1	N1	C2	H2C3	332.6	68.4
H1C1	C1	N1	H1C2	120.0	119.9
H1C1	C1	N1	H1C3	240.0	239.9
H1C2	C1	N1	H1C3	120.0	120.0
H2C1	C2	N1	C1	212.6	308.4
N1	C2	H2C1	H2C2	240.0	239.2
N1	C2	H2C1	H2C3	120.0	120.9
H2C2	C2	H2C1	H2C3	240.0	241.7
H2C2	C2	N1	C1	92.6	188.4
N1	C2	H2C2	H2C1	120.0	120.8
N1	C2	H2C2	H2C3	240.0	239.1
H2C1	C2	H2C2	H2C3	120.0	118.3
H2C3	C2	N1	C1	332.6	68.4
N1	C2	H2C3	H2C1	240.0	239.2
N1	C2	H2C3	H2C2	120.0	120.9
H2C1	C2	H2C3	H2C2	240.0	241.7
N1	C1	H1C1	H1C2	240.0	239.1
N1	C1	H1C1	H1C3	120.0	120.9
H1C2	C1	H1C1	H1C3	240.0	241.8
N1	C1	H1C2	H1C1	120.0	120.8
N1	C1	H1C2	H1C3	240.0	239.1
H1C1	C1	H1C2	H1C3	120.0	118.3
N1	C1	H1C3	H1C1	240.0	239.2
N1	C1	H1C3	H1C2	120.0	120.9
H1C1	C1	H1C3	H1C2	240.0	241.8
C4	C3	O2	H3C1	116.9	239.5
C4	C3	O2	H3C2	240.0	120.6
O2	C3	C4	H4C1	279.4	180.0
O2	C3	C4	H4C2	159.4	300.8
O2	C3	C4	H4C3	39.4	59.1
H3C1	C3	O2	H3C2	123.1	241.1
O2	C3	C4	H3C1	243.1	119.5
O2	C3	C4	H3C2	120.0	240.5
H3C1	C3	C4	H3C2	236.9	121.0
H4C1	C4	C3	H4C2	120.0	239.2
H4C1	C4	C3	H4C3	240.0	120.9
H4C2	C4	C3	H4C3	120.0	241.7
O2	C3	H3C1	C4	123.8	240.4
O2	C3	H3C1	H3C2	241.9	118.6
C4	C3	H3C1	H3C2	118.1	238.2
H3C1	C3	C4	H4C1	36.4	60.5
H3C1	C3	C4	H4C2	276.3	181.3
H3C1	C3	C4	H4C3	156.4	299.6
O2	C3	H3C2	C4	234.5	119.6
O2	C3	H3C2	H3C1	117.2	241.4
C4	C3	H3C2	H3C1	242.8	121.7
H3C2	C3	C4	H4C1	159.5	299.5
H3C2	C3	C4	H4C2	39.4	60.4
H3C2	C3	C4	H4C3	279.4	178.6
H4C1	C4	C3	H3C1	36.4	60.5
H4C1	C4	C3	H3C2	159.5	299.5
C3	C4	H4C1	H4C2	240.0	121.9
C3	C4	H4C1	H4C3	120.0	238.0
H4C2	C4	H4C1	H4C3	240.0	116.1
H4C2	C4	C3	H3C1	276.3	181.3
H4C2	C4	C3	H3C2	39.4	60.4
C3	C4	H4C2	H4C1	120.0	237.9
C3	C4	H4C2	H4C3	240.0	120.5
H4C1	C4	H4C2	H4C3	120.0	242.6
H4C3	C4	C3	H3C1	156.4	299.6
H4C3	C4	C3	H3C2	279.4	178.6
C3	C4	H4C3	H4C1	240.0	122.1
C3	C4	H4C3	H4C2	120.0	239.5
H4C1	C4	H4C3	H4C2	240.0	117.3