PDB Chemical Component NTG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NTG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C11 |
C10 |
1.516 |
1.507 |
| C11 |
N3 |
1.463 |
1.477 |
| C10 |
O1 |
1.426 |
1.439 |
| N3 |
C5 |
1.379 |
1.392 |
| N3 |
C7 |
1.468 |
1.404 |
| C4 |
C5 |
1.403 |
1.394 |
| C4 |
C3 |
1.384 |
1.383 |
| C5 |
C6 |
1.396 |
1.393 |
| C7 |
C8 |
1.523 |
1.545 |
| C8 |
C9 |
1.517 |
1.507 |
| C3 |
C2 |
1.387 |
1.395 |
| O1 |
C9 |
1.426 |
1.442 |
| C6 |
N2 |
1.337 |
1.315 |
| C2 |
N2 |
1.348 |
1.328 |
| C2 |
C1 |
1.451 |
1.432 |
| C1 |
N1 |
1.145 |
1.136 |
| C4 |
H1 |
1.080 |
1.080 |
| C6 |
H2 |
1.080 |
1.080 |
| C7 |
H3 |
1.100 |
1.090 |
| C7 |
H4 |
1.100 |
1.090 |
| C8 |
H5 |
1.100 |
1.089 |
| C8 |
H6 |
1.100 |
1.090 |
| C10 |
H7 |
1.100 |
1.091 |
| C10 |
H8 |
1.100 |
1.090 |
| C11 |
H9 |
1.100 |
1.090 |
| C11 |
H10 |
1.100 |
1.090 |
| C3 |
H11 |
1.080 |
1.080 |
| C9 |
H12 |
1.100 |
1.090 |
| C9 |
H13 |
1.100 |
1.090 |
Bond Angles for NTG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C11 |
C10 |
O1 |
109.0 |
111.9 |
| C11 |
C10 |
H7 |
109.6 |
109.0 |
| C11 |
C10 |
H8 |
109.6 |
109.0 |
| C10 |
O1 |
C9 |
119.4 |
116.1 |
| O1 |
C10 |
H7 |
109.6 |
109.0 |
| O1 |
C10 |
H8 |
109.6 |
109.0 |
| C5 |
N3 |
C7 |
121.9 |
111.0 |
| N3 |
C5 |
C4 |
121.9 |
120.4 |
| N3 |
C5 |
C6 |
120.7 |
120.4 |
| N3 |
C7 |
C8 |
115.0 |
111.5 |
| N3 |
C7 |
H3 |
108.1 |
109.1 |
| N3 |
C7 |
H4 |
108.0 |
109.1 |
| C5 |
C4 |
C3 |
119.7 |
118.4 |
| C4 |
C5 |
C6 |
117.4 |
119.2 |
| C5 |
C4 |
H1 |
120.1 |
120.8 |
| C4 |
C3 |
C2 |
118.8 |
119.1 |
| C3 |
C4 |
H1 |
120.1 |
120.7 |
| C4 |
C3 |
H11 |
120.6 |
120.4 |
| C5 |
C6 |
N2 |
123.0 |
120.8 |
| C5 |
C6 |
H2 |
118.5 |
119.6 |
| C7 |
C8 |
C9 |
113.8 |
109.1 |
| C8 |
C7 |
H3 |
108.1 |
109.0 |
| C8 |
C7 |
H4 |
108.1 |
109.1 |
| C7 |
C8 |
H5 |
108.4 |
109.5 |
| C7 |
C8 |
H6 |
108.4 |
109.5 |
| C9 |
C8 |
H5 |
108.4 |
109.5 |
| C9 |
C8 |
H6 |
108.4 |
109.5 |
| C8 |
C9 |
H12 |
109.0 |
108.8 |
| C8 |
C9 |
H13 |
109.0 |
108.8 |
| C3 |
C2 |
N2 |
122.2 |
120.7 |
| O1 |
C9 |
H12 |
109.0 |
108.8 |
| O1 |
C9 |
H13 |
109.0 |
108.8 |
| C6 |
N2 |
C2 |
118.8 |
121.7 |
| N2 |
C6 |
H2 |
118.5 |
119.6 |
| H3 |
C7 |
H4 |
109.5 |
109.0 |
| H5 |
C8 |
H6 |
109.5 |
109.6 |
| H7 |
C10 |
H8 |
109.5 |
109.0 |
| H9 |
C11 |
H10 |
109.4 |
109.8 |
| H12 |
C9 |
H13 |
109.5 |
108.8 |
Torsion Angles for NTG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C11 |
C10 |
O1 |
C9 |
83.4 |
319.3 |
| O1 |
C10 |
C11 |
H7 |
240.1 |
239.4 |
| O1 |
C10 |
C11 |
H8 |
119.9 |
120.6 |
| H7 |
C10 |
C11 |
H8 |
239.8 |
241.2 |
| C11 |
N3 |
C7 |
H3 |
161.1 |
181.7 |
| C11 |
N3 |
C7 |
H4 |
279.5 |
300.7 |
| C11 |
C10 |
O1 |
H7 |
119.9 |
120.6 |
| C11 |
C10 |
O1 |
H8 |
240.1 |
239.4 |
| C10 |
O1 |
C9 |
H12 |
198.4 |
197.8 |
| C10 |
O1 |
C9 |
H13 |
79.0 |
79.5 |
| H7 |
C10 |
O1 |
H8 |
120.1 |
118.8 |
| C5 |
N3 |
C7 |
C8 |
220.2 |
187.9 |
| C5 |
N3 |
C7 |
H3 |
341.0 |
308.3 |
| C5 |
N3 |
C7 |
H4 |
99.4 |
67.3 |
| N3 |
C5 |
C4 |
C3 |
179.7 |
180.0 |
| C4 |
C5 |
N3 |
C6 |
179.8 |
180.1 |
| N3 |
C5 |
C4 |
H1 |
359.7 |
359.7 |
| N3 |
C5 |
C6 |
N2 |
179.7 |
180.0 |
| N3 |
C5 |
C6 |
H2 |
359.7 |
0.1 |
| C7 |
N3 |
C5 |
C4 |
172.7 |
180.0 |
| C7 |
N3 |
C5 |
C6 |
352.9 |
359.9 |
| N3 |
C7 |
C8 |
C9 |
48.6 |
284.6 |
| C8 |
C7 |
N3 |
H3 |
239.2 |
239.5 |
| C8 |
C7 |
N3 |
H4 |
120.8 |
120.5 |
| N3 |
C7 |
C8 |
H5 |
169.2 |
44.5 |
| N3 |
C7 |
C8 |
H6 |
287.9 |
164.7 |
| H3 |
C7 |
N3 |
H4 |
241.6 |
241.0 |
| C4 |
C5 |
N3 |
C7 |
172.7 |
180.0 |
| N3 |
C5 |
C4 |
C6 |
180.2 |
179.9 |
| C5 |
C4 |
C3 |
C2 |
0.7 |
359.9 |
| C3 |
C4 |
C5 |
H1 |
180.0 |
180.3 |
| C5 |
C4 |
C3 |
H11 |
180.7 |
180.0 |
| C4 |
C5 |
C6 |
N2 |
360.0 |
360.0 |
| C4 |
C5 |
C6 |
H2 |
179.9 |
180.0 |
| C3 |
C4 |
C5 |
C6 |
359.5 |
0.0 |
| C5 |
C4 |
C3 |
H1 |
180.0 |
179.7 |
| C4 |
C3 |
C2 |
N2 |
359.6 |
0.1 |
| C6 |
C5 |
N3 |
C7 |
352.9 |
359.9 |
| N3 |
C5 |
C6 |
C4 |
179.8 |
180.1 |
| C6 |
C5 |
C4 |
C3 |
359.5 |
0.0 |
| C6 |
C5 |
C4 |
H1 |
179.5 |
179.8 |
| C5 |
C6 |
N2 |
C2 |
0.4 |
0.0 |
| N2 |
C6 |
C5 |
H2 |
180.0 |
180.0 |
| N3 |
C7 |
C8 |
H3 |
120.8 |
120.5 |
| N3 |
C7 |
C8 |
H4 |
239.2 |
239.5 |
| C9 |
C8 |
C7 |
H5 |
239.4 |
240.1 |
| C9 |
C8 |
C7 |
H6 |
120.7 |
119.9 |
| C7 |
C8 |
C9 |
H12 |
69.0 |
212.4 |
| C7 |
C8 |
C9 |
H13 |
188.4 |
330.7 |
| H3 |
C7 |
C8 |
H4 |
118.4 |
119.0 |
| H5 |
C8 |
C7 |
H6 |
241.3 |
239.8 |
| C10 |
O1 |
C9 |
C8 |
318.7 |
318.7 |
| C9 |
C8 |
C7 |
H3 |
287.8 |
164.1 |
| C9 |
C8 |
C7 |
H4 |
169.4 |
45.1 |
| C7 |
C8 |
C9 |
H5 |
120.6 |
119.9 |
| C7 |
C8 |
C9 |
H6 |
239.3 |
240.1 |
| O1 |
C9 |
C8 |
H12 |
239.7 |
239.1 |
| O1 |
C9 |
C8 |
H13 |
120.3 |
120.8 |
| H5 |
C8 |
C9 |
H6 |
118.7 |
120.3 |
| H12 |
C9 |
C8 |
H13 |
240.6 |
241.7 |
| C2 |
C3 |
C4 |
H1 |
180.7 |
180.2 |
| C4 |
C3 |
C2 |
H11 |
180.0 |
180.1 |
| C6 |
N2 |
C2 |
C3 |
359.8 |
359.9 |
| C9 |
O1 |
C10 |
H7 |
323.4 |
198.7 |
| C9 |
O1 |
C10 |
H8 |
203.3 |
79.8 |
| O1 |
C9 |
C8 |
H5 |
188.0 |
331.7 |
| O1 |
C9 |
C8 |
H6 |
69.3 |
211.4 |
| C8 |
C9 |
O1 |
H12 |
120.3 |
120.8 |
| C8 |
C9 |
O1 |
H13 |
239.7 |
239.2 |
| H12 |
C9 |
O1 |
H13 |
119.5 |
118.3 |
| C5 |
C6 |
N2 |
H2 |
180.0 |
180.0 |
| C3 |
C2 |
N2 |
C6 |
359.8 |
359.9 |
| C2 |
N2 |
C6 |
H2 |
180.4 |
180.0 |
| C4 |
C3 |
C2 |
C1 |
179.9 |
180.0 |
| C6 |
N2 |
C2 |
C1 |
179.6 |
180.0 |
| C5 |
C4 |
H1 |
C3 |
180.0 |
180.3 |
| H1 |
C4 |
C5 |
C6 |
179.5 |
179.8 |
| H1 |
C4 |
C3 |
C2 |
180.7 |
180.2 |
| H1 |
C4 |
C3 |
H11 |
0.7 |
0.3 |
| C5 |
C6 |
H2 |
N2 |
180.0 |
180.0 |
| H2 |
C6 |
N2 |
C2 |
180.4 |
180.0 |
| N3 |
C7 |
H3 |
C8 |
235.0 |
238.1 |
| N3 |
C7 |
H3 |
H4 |
117.5 |
119.1 |
| H3 |
C7 |
C8 |
C9 |
287.8 |
164.1 |
| C8 |
C7 |
H3 |
H4 |
242.5 |
241.0 |
| H3 |
C7 |
C8 |
H5 |
48.4 |
284.0 |
| H3 |
C7 |
C8 |
H6 |
167.1 |
44.2 |
| N3 |
C7 |
H4 |
C8 |
125.0 |
122.0 |
| N3 |
C7 |
H4 |
H3 |
242.5 |
240.9 |
| H4 |
C7 |
C8 |
C9 |
169.4 |
45.1 |
| C8 |
C7 |
H4 |
H3 |
117.5 |
119.0 |
| H4 |
C7 |
C8 |
H5 |
290.0 |
165.0 |
| H4 |
C7 |
C8 |
H6 |
48.7 |
285.2 |
| C7 |
C8 |
H5 |
C9 |
236.0 |
240.4 |
| H5 |
C8 |
C7 |
H3 |
48.4 |
284.0 |
| H5 |
C8 |
C7 |
H4 |
290.0 |
165.0 |
| C7 |
C8 |
H5 |
H6 |
118.0 |
120.2 |
| C9 |
C8 |
H5 |
H6 |
242.0 |
239.8 |
| H5 |
C8 |
C9 |
H12 |
308.3 |
92.5 |
| H5 |
C8 |
C9 |
H13 |
67.8 |
210.9 |
| C7 |
C8 |
H6 |
C9 |
124.0 |
119.6 |
| H6 |
C8 |
C7 |
H3 |
167.1 |
44.2 |
| H6 |
C8 |
C7 |
H4 |
48.7 |
285.2 |
| C7 |
C8 |
H6 |
H5 |
242.0 |
239.8 |
| C9 |
C8 |
H6 |
H5 |
118.0 |
120.2 |
| H6 |
C8 |
C9 |
H12 |
189.6 |
332.3 |
| H6 |
C8 |
C9 |
H13 |
309.1 |
90.6 |
| C11 |
C10 |
H7 |
O1 |
240.4 |
237.6 |
| C11 |
C10 |
H7 |
H8 |
120.2 |
118.8 |
| H7 |
C10 |
O1 |
C9 |
323.4 |
198.7 |
| O1 |
C10 |
H7 |
H8 |
239.8 |
241.2 |
| C11 |
C10 |
H8 |
O1 |
119.6 |
122.4 |
| C11 |
C10 |
H8 |
H7 |
239.8 |
241.2 |
| H8 |
C10 |
O1 |
C9 |
203.3 |
79.8 |
| O1 |
C10 |
H8 |
H7 |
120.2 |
118.8 |
| H9 |
C11 |
C10 |
O1 |
115.9 |
333.7 |
| H9 |
C11 |
C10 |
H7 |
235.8 |
94.3 |
| H9 |
C11 |
C10 |
H8 |
355.9 |
213.1 |
| H10 |
C11 |
C10 |
O1 |
234.6 |
213.1 |
| H10 |
C11 |
C10 |
H7 |
354.5 |
333.7 |
| H10 |
C11 |
C10 |
H8 |
114.7 |
92.5 |
| C4 |
C3 |
H11 |
C2 |
180.0 |
179.9 |
| H11 |
C3 |
C4 |
H1 |
0.7 |
0.3 |
| H11 |
C3 |
C2 |
N2 |
179.6 |
180.0 |
| H12 |
C9 |
C8 |
H5 |
308.3 |
92.5 |
| H12 |
C9 |
C8 |
H6 |
189.6 |
332.3 |
| C8 |
C9 |
H12 |
H13 |
119.1 |
118.4 |
| O1 |
C9 |
H12 |
H13 |
240.8 |
241.7 |
| H13 |
C9 |
C8 |
H5 |
67.8 |
210.9 |
| H13 |
C9 |
C8 |
H6 |
309.1 |
90.6 |
| C8 |
C9 |
H13 |
H12 |
240.8 |
241.7 |
| O1 |
C9 |
H13 |
H12 |
119.2 |
118.4 |