PDB Chemical Component NTC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NTC

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 O1 1.202 1.218
N1 O2 1.206 1.219
N1 C2 1.507 1.466
C2 C3 1.534 1.529
C2 H21 1.114 1.091
C2 H22 1.115 1.090
C3 O7 1.453 1.428
C3 C4 1.582 1.530
C3 C6 1.570 1.507
O7 HO7 0.950 0.967
C4 C5 1.511 1.508
C4 H41 1.115 1.090
C4 H42 1.115 1.090
C5 O3 1.210 1.208
C5 O4 1.207 1.342
O4 HO4 0.949 0.967
C6 O5 1.272 1.208
C6 O6 1.278 1.342
O6 HO6 0.950 0.967

Bond Angles for NTC

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 N1 O2 126.7 120.0
O1 N1 C2 105.3 120.0
O2 N1 C2 127.5 120.0
N1 C2 C3 127.3 109.5
N1 C2 H21 106.0 109.5
N1 C2 H22 105.9 109.4
C3 C2 H21 106.0 109.5
C3 C2 H22 105.9 109.5
C2 C3 O7 104.8 109.5
C2 C3 C4 92.3 109.4
C2 C3 C6 114.5 109.5
H21 C2 H22 103.5 109.5
O7 C3 C4 123.5 109.5
O7 C3 C6 109.9 109.5
C3 O7 HO7 104.9 106.8
C4 C3 C6 110.6 109.4
C3 C4 C5 125.7 109.5
C3 C4 H41 106.4 109.5
C3 C4 H42 106.5 109.5
C3 C6 O5 118.5 120.0
C3 C6 O6 118.7 120.0
C5 C4 H41 106.5 109.5
C5 C4 H42 106.5 109.4
C4 C5 O3 117.7 120.0
C4 C5 O4 119.0 120.0
H41 C4 H42 103.1 109.5
O3 C5 O4 123.3 120.0
C5 O4 HO4 119.0 120.0
O5 C6 O6 122.8 120.0
C6 O6 HO6 118.6 120.1

Torsion Angles for NTC

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 N1 O1 C2 186.9 179.9
O1 N1 C2 C3 207.2 45.0
O1 N1 C2 H21 332.5 165.0
O1 N1 C2 H22 82.0 285.0
O1 N1 O2 C2 171.7 180.1
O2 N1 C2 C3 20.3 225.0
O2 N1 C2 H21 145.6 345.1
O2 N1 C2 H22 255.1 105.1
O1 N1 C2 O2 186.9 179.9
C3 C2 N1 H21 234.7 240.0
C3 C2 N1 H22 125.2 120.0
N1 C2 C3 O7 250.9 300.0
N1 C2 C3 C4 125.3 180.0
N1 C2 C3 C6 11.4 60.0
H21 C2 N1 H22 250.5 240.0
N1 C2 C3 H21 125.3 120.0
N1 C2 C3 H22 234.8 240.0
H21 C2 C3 H22 109.5 120.0
O7 C3 C2 C4 125.6 120.0
O7 C3 C2 C6 239.5 240.0
C2 C3 O7 HO7 180.0 300.0
C4 C3 C2 C6 113.9 120.0
C2 C3 C4 C5 31.6 185.0
C2 C3 C4 H41 156.9 305.0
C2 C3 C4 H42 266.3 65.1
C2 C3 C6 O5 269.1 240.0
C2 C3 C6 O6 87.9 59.9
N1 C2 H21 C3 222.5 240.0
N1 C2 H21 H22 111.2 120.0
C3 C2 H21 H22 248.8 240.0
H21 C2 C3 O7 125.6 180.0
H21 C2 C3 C4 0.0 60.0
H21 C2 C3 C6 246.1 300.0
N1 C2 H22 C3 137.5 120.0
N1 C2 H22 H21 248.7 240.0
C3 C2 H22 H21 111.3 120.0
H22 C2 C3 O7 16.1 60.0
H22 C2 C3 C4 250.5 300.0
H22 C2 C3 C6 136.6 180.0
O7 C3 C2 H21 125.6 180.0
O7 C3 C2 H22 16.1 60.0
C2 C3 O7 C4 257.0 240.0
C2 C3 O7 C6 123.5 120.1
C4 C3 O7 C6 226.5 240.0
O7 C3 C4 C5 282.1 65.0
O7 C3 C4 H41 47.3 185.0
O7 C3 C4 H42 156.8 305.0
O7 C3 C6 O5 26.7 0.1
O7 C3 C6 O6 205.6 180.0
C4 C3 C2 H21 0.0 60.0
C4 C3 C2 H22 250.5 300.0
C2 C3 C4 O7 109.5 120.0
C2 C3 C4 C6 242.7 240.0
O7 C3 C4 C6 133.2 120.0
C4 C3 O7 HO7 283.0 60.0
C4 C3 C6 O5 166.5 120.0
C4 C3 C6 O6 345.3 300.0
C5 C4 C3 H41 234.7 240.0
C5 C4 C3 H42 125.3 119.9
C3 C4 C5 O3 93.0 0.0
C3 C4 C5 O4 273.2 180.0
H41 C4 C3 H42 250.5 240.0
C6 C3 C2 H21 246.1 300.0
C6 C3 C2 H22 136.6 180.0
C2 C3 C6 O7 242.4 240.0
C2 C3 C6 C4 102.6 120.0
O7 C3 C6 C4 220.2 240.0
C6 C3 O7 HO7 56.5 179.9
C6 C3 C4 C5 148.8 305.0
C6 C3 C4 H41 274.1 65.0
C6 C3 C4 H42 23.6 185.1
O5 C6 C3 O6 181.2 180.1
C3 C6 O6 HO6 180.0 180.0
HO7 O7 C3 C4 283.0 60.0
HO7 O7 C3 C6 56.5 179.9
C5 C4 C3 C6 148.8 305.0
C3 C4 C5 H41 125.2 120.1
C3 C4 C5 H42 234.8 240.0
H41 C4 C5 H42 109.6 120.0
O3 C5 C4 O4 179.8 180.0
C4 C5 O4 HO4 180.0 180.0
H41 C4 C3 C6 274.1 65.0
C3 C4 H41 C5 223.8 240.0
C3 C4 H41 H42 111.8 120.0
C5 C4 H41 H42 248.1 240.1
H41 C4 C5 O3 327.8 240.0
H41 C4 C5 O4 148.0 59.9
H42 C4 C3 C6 23.6 185.1
C3 C4 H42 C5 136.3 120.0
C3 C4 H42 H41 248.2 239.9
C5 C4 H42 H41 112.0 120.0
H42 C4 C5 O3 218.2 120.0
H42 C4 C5 O4 38.4 300.0
O3 C5 C4 H41 327.8 240.0
O3 C5 C4 H42 218.2 120.0
C4 C5 O3 O4 180.2 180.0
O3 C5 O4 HO4 0.2 360.0
O4 C5 C4 H41 148.0 59.9
O4 C5 C4 H42 38.4 300.0
C4 C5 O4 O3 179.8 180.0
C3 C6 O5 O6 178.8 179.9
O5 C6 O6 HO6 358.8 359.9
C3 C6 O6 O5 181.2 180.1