PDB Chemical Component NST
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NST
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.408 |
1.397 |
N1 |
S13 |
1.732 |
1.656 |
N1 |
HN1 |
1.021 |
0.970 |
C2 |
C3 |
1.447 |
1.389 |
C2 |
C4 |
1.432 |
1.389 |
C3 |
C5 |
1.443 |
1.381 |
C3 |
H3 |
1.103 |
1.080 |
C4 |
C6 |
1.438 |
1.381 |
C4 |
H4 |
1.103 |
1.079 |
C5 |
C7 |
1.444 |
1.383 |
C5 |
H5 |
1.102 |
1.080 |
C6 |
C7 |
1.449 |
1.382 |
C6 |
N2 |
1.374 |
1.481 |
C7 |
H7 |
1.102 |
1.080 |
N2 |
O1 |
1.226 |
1.218 |
N2 |
O2 |
1.220 |
1.218 |
S13 |
C15 |
1.854 |
1.762 |
S13 |
O16 |
1.449 |
1.421 |
S13 |
O17 |
1.427 |
1.421 |
C15 |
C18 |
1.409 |
1.387 |
C15 |
C19 |
1.412 |
1.373 |
C18 |
S20 |
1.451 |
1.784 |
C18 |
C21 |
1.505 |
1.464 |
C19 |
C22 |
1.403 |
1.359 |
C19 |
H19 |
1.103 |
1.080 |
S20 |
C22 |
1.407 |
1.733 |
C21 |
O23 |
1.336 |
1.348 |
C21 |
O24 |
1.219 |
1.217 |
C22 |
H22 |
1.103 |
1.081 |
O23 |
H23 |
0.951 |
0.967 |
Bond Angles for NST
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
S13 |
121.0 |
120.0 |
C2 |
N1 |
HN1 |
108.1 |
120.0 |
N1 |
C2 |
C3 |
120.7 |
120.1 |
N1 |
C2 |
C4 |
118.5 |
120.0 |
S13 |
N1 |
HN1 |
108.1 |
120.0 |
N1 |
S13 |
C15 |
114.0 |
107.4 |
N1 |
S13 |
O16 |
106.9 |
105.8 |
N1 |
S13 |
O17 |
109.2 |
105.7 |
C3 |
C2 |
C4 |
120.8 |
119.9 |
C2 |
C3 |
C5 |
119.3 |
119.9 |
C2 |
C3 |
H3 |
120.4 |
120.1 |
C2 |
C4 |
C6 |
120.2 |
119.9 |
C2 |
C4 |
H4 |
119.6 |
120.1 |
C5 |
C3 |
H3 |
120.2 |
120.0 |
C3 |
C5 |
C7 |
119.8 |
120.1 |
C3 |
C5 |
H5 |
120.1 |
120.0 |
C6 |
C4 |
H4 |
120.2 |
120.0 |
C4 |
C6 |
C7 |
119.4 |
120.1 |
C4 |
C6 |
N2 |
120.0 |
119.9 |
C7 |
C5 |
H5 |
120.2 |
119.9 |
C5 |
C7 |
C6 |
120.5 |
120.1 |
C5 |
C7 |
H7 |
119.6 |
119.9 |
C7 |
C6 |
N2 |
120.6 |
120.0 |
C6 |
C7 |
H7 |
119.9 |
119.9 |
C6 |
N2 |
O1 |
120.5 |
120.0 |
C6 |
N2 |
O2 |
120.3 |
120.0 |
O1 |
N2 |
O2 |
119.2 |
120.0 |
C15 |
S13 |
O16 |
107.7 |
105.8 |
C15 |
S13 |
O17 |
109.6 |
105.7 |
S13 |
C15 |
C18 |
127.4 |
121.5 |
S13 |
C15 |
C19 |
125.0 |
121.5 |
O16 |
S13 |
O17 |
109.2 |
125.4 |
C18 |
C15 |
C19 |
107.6 |
117.0 |
C15 |
C18 |
S20 |
107.6 |
101.9 |
C15 |
C18 |
C21 |
126.6 |
129.0 |
C15 |
C19 |
C22 |
109.3 |
119.2 |
C15 |
C19 |
H19 |
125.6 |
120.3 |
S20 |
C18 |
C21 |
125.7 |
129.1 |
C18 |
S20 |
C22 |
107.3 |
98.6 |
C18 |
C21 |
O23 |
121.4 |
120.0 |
C18 |
C21 |
O24 |
119.3 |
120.0 |
C22 |
C19 |
H19 |
125.1 |
120.4 |
C19 |
C22 |
S20 |
108.1 |
103.2 |
C19 |
C22 |
H22 |
125.8 |
128.4 |
S20 |
C22 |
H22 |
126.0 |
128.4 |
O23 |
C21 |
O24 |
119.3 |
120.0 |
C21 |
O23 |
H23 |
121.4 |
120.1 |
Torsion Angles for NST
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
S13 |
N1 |
C2 |
HN1 |
125.3 |
179.9 |
C2 |
N1 |
S13 |
C15 |
77.1 |
63.4 |
C2 |
N1 |
S13 |
O16 |
196.0 |
310.7 |
C2 |
N1 |
S13 |
O17 |
314.1 |
175.9 |
C3 |
C2 |
N1 |
C4 |
180.7 |
180.2 |
N1 |
C2 |
C3 |
C5 |
179.4 |
180.0 |
N1 |
C2 |
C3 |
H3 |
359.4 |
0.0 |
N1 |
C2 |
C4 |
C6 |
180.8 |
179.7 |
N1 |
C2 |
C4 |
H4 |
0.7 |
0.2 |
C2 |
N1 |
S13 |
HN1 |
234.7 |
180.1 |
S13 |
N1 |
C2 |
C3 |
98.6 |
45.3 |
S13 |
N1 |
C2 |
C4 |
277.9 |
225.2 |
C15 |
S13 |
N1 |
O16 |
241.1 |
112.6 |
C15 |
S13 |
N1 |
O17 |
123.0 |
247.5 |
N1 |
S13 |
C15 |
C18 |
56.3 |
64.0 |
N1 |
S13 |
C15 |
C19 |
236.4 |
244.5 |
O16 |
S13 |
N1 |
O17 |
242.0 |
134.8 |
C2 |
N1 |
HN1 |
S13 |
132.6 |
179.9 |
HN1 |
N1 |
C2 |
C3 |
333.3 |
225.4 |
HN1 |
N1 |
C2 |
C4 |
152.6 |
45.2 |
HN1 |
N1 |
S13 |
C15 |
202.4 |
243.3 |
HN1 |
N1 |
S13 |
O16 |
321.3 |
130.6 |
HN1 |
N1 |
S13 |
O17 |
79.4 |
355.8 |
C3 |
C2 |
N1 |
S13 |
98.6 |
45.3 |
C3 |
C2 |
N1 |
HN1 |
333.3 |
225.4 |
N1 |
C2 |
C3 |
C4 |
179.3 |
179.8 |
C3 |
C2 |
C4 |
C6 |
0.1 |
359.5 |
C3 |
C2 |
C4 |
H4 |
180.0 |
180.0 |
C5 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C2 |
C3 |
C5 |
C7 |
359.7 |
0.1 |
C2 |
C3 |
C5 |
H5 |
179.7 |
180.0 |
C4 |
C2 |
N1 |
S13 |
277.9 |
225.2 |
C4 |
C2 |
N1 |
HN1 |
152.6 |
45.2 |
N1 |
C2 |
C4 |
C3 |
180.7 |
180.2 |
C4 |
C2 |
C3 |
C5 |
0.1 |
0.2 |
C4 |
C2 |
C3 |
H3 |
180.1 |
180.2 |
C6 |
C4 |
C2 |
H4 |
180.0 |
179.5 |
C2 |
C4 |
C6 |
C7 |
359.9 |
0.5 |
C2 |
C4 |
C6 |
N2 |
179.5 |
180.3 |
C5 |
C3 |
C2 |
C4 |
0.1 |
0.2 |
C2 |
C3 |
C5 |
H3 |
180.0 |
180.0 |
C7 |
C5 |
C3 |
H5 |
180.0 |
180.1 |
C3 |
C5 |
C7 |
C6 |
0.3 |
359.9 |
C3 |
C5 |
C7 |
H7 |
180.3 |
180.0 |
H3 |
C3 |
C2 |
C4 |
180.1 |
180.2 |
C2 |
C3 |
H3 |
C5 |
180.0 |
180.0 |
H3 |
C3 |
C5 |
C7 |
179.7 |
180.0 |
H3 |
C3 |
C5 |
H5 |
359.7 |
359.9 |
C2 |
C4 |
C6 |
H4 |
180.0 |
180.5 |
C5 |
C7 |
C6 |
C4 |
359.9 |
359.8 |
C7 |
C6 |
C4 |
N2 |
180.4 |
180.2 |
C4 |
C6 |
C7 |
H7 |
179.9 |
179.8 |
C4 |
C6 |
N2 |
O1 |
0.4 |
180.2 |
C4 |
C6 |
N2 |
O2 |
180.6 |
0.2 |
C2 |
C4 |
H4 |
C6 |
180.0 |
179.5 |
H4 |
C4 |
C6 |
C7 |
180.0 |
180.0 |
H4 |
C4 |
C6 |
N2 |
359.6 |
359.8 |
C7 |
C5 |
C3 |
H3 |
179.7 |
180.0 |
C3 |
C5 |
C7 |
H5 |
180.0 |
179.9 |
C4 |
C6 |
C7 |
C5 |
359.9 |
359.8 |
C5 |
C7 |
C6 |
N2 |
180.3 |
180.0 |
C6 |
C7 |
C5 |
H7 |
180.0 |
180.0 |
H5 |
C5 |
C3 |
H3 |
359.7 |
359.9 |
C3 |
C5 |
H5 |
C7 |
180.0 |
180.1 |
H5 |
C5 |
C7 |
C6 |
180.3 |
180.0 |
H5 |
C5 |
C7 |
H7 |
0.3 |
0.0 |
C7 |
C6 |
C4 |
H4 |
180.0 |
180.0 |
C4 |
C6 |
C7 |
N2 |
179.6 |
179.8 |
C6 |
C7 |
C5 |
H5 |
180.3 |
180.0 |
C5 |
C7 |
C6 |
H7 |
180.0 |
180.0 |
C7 |
C6 |
N2 |
O1 |
180.0 |
0.0 |
C7 |
C6 |
N2 |
O2 |
0.2 |
180.0 |
N2 |
C6 |
C4 |
H4 |
359.6 |
359.8 |
C4 |
C6 |
N2 |
C7 |
180.4 |
180.2 |
N2 |
C6 |
C7 |
H7 |
0.3 |
360.0 |
O1 |
N2 |
C6 |
O2 |
179.8 |
180.0 |
H7 |
C7 |
C5 |
H5 |
0.3 |
0.0 |
C5 |
C7 |
H7 |
C6 |
180.0 |
180.0 |
H7 |
C7 |
C6 |
N2 |
0.3 |
360.0 |
C6 |
N2 |
O1 |
O2 |
180.2 |
180.0 |
C6 |
N2 |
O2 |
O1 |
179.8 |
180.0 |
C15 |
S13 |
N1 |
HN1 |
202.4 |
243.3 |
N1 |
S13 |
C15 |
O16 |
118.4 |
247.4 |
N1 |
S13 |
C15 |
O17 |
237.2 |
112.5 |
O16 |
S13 |
C15 |
O17 |
118.8 |
225.2 |
C18 |
C15 |
S13 |
C19 |
180.0 |
179.5 |
S13 |
C15 |
C18 |
S20 |
180.0 |
180.1 |
S13 |
C15 |
C18 |
C21 |
0.2 |
0.3 |
S13 |
C15 |
C19 |
C22 |
179.9 |
180.0 |
S13 |
C15 |
C19 |
H19 |
359.8 |
359.8 |
O16 |
S13 |
N1 |
HN1 |
321.3 |
130.6 |
N1 |
S13 |
O16 |
C15 |
237.1 |
113.7 |
N1 |
S13 |
O16 |
O17 |
118.0 |
236.9 |
C15 |
S13 |
O16 |
O17 |
241.0 |
123.2 |
O16 |
S13 |
C15 |
C18 |
297.9 |
176.6 |
O16 |
S13 |
C15 |
C19 |
117.9 |
357.2 |
O17 |
S13 |
N1 |
HN1 |
79.4 |
355.8 |
N1 |
S13 |
O17 |
C15 |
125.6 |
246.3 |
N1 |
S13 |
O17 |
O16 |
243.5 |
123.2 |
C15 |
S13 |
O17 |
O16 |
117.8 |
236.8 |
O17 |
S13 |
C15 |
C18 |
179.1 |
311.5 |
O17 |
S13 |
C15 |
C19 |
359.2 |
132.0 |
C18 |
C15 |
S13 |
O16 |
297.9 |
176.6 |
C18 |
C15 |
S13 |
O17 |
179.1 |
311.5 |
S13 |
C15 |
C18 |
C19 |
180.0 |
180.5 |
C18 |
C15 |
C19 |
C22 |
359.9 |
0.5 |
C18 |
C15 |
C19 |
H19 |
179.9 |
180.3 |
S20 |
C18 |
C15 |
C21 |
179.8 |
179.8 |
C15 |
C18 |
S20 |
C22 |
0.2 |
0.2 |
C15 |
C18 |
C21 |
O23 |
359.4 |
174.8 |
C15 |
C18 |
C21 |
O24 |
179.8 |
354.7 |
C19 |
C15 |
S13 |
O16 |
117.9 |
357.2 |
C19 |
C15 |
S13 |
O17 |
359.2 |
132.0 |
S13 |
C15 |
C19 |
C18 |
180.0 |
179.5 |
C19 |
C15 |
C18 |
S20 |
359.9 |
359.6 |
C19 |
C15 |
C18 |
C21 |
180.1 |
179.8 |
C22 |
C19 |
C15 |
H19 |
180.1 |
180.3 |
C15 |
C19 |
C22 |
S20 |
0.2 |
359.7 |
C15 |
C19 |
C22 |
H22 |
180.2 |
179.8 |
S20 |
C18 |
C15 |
C19 |
359.9 |
359.6 |
C15 |
C18 |
S20 |
C21 |
180.2 |
180.2 |
S20 |
C18 |
C21 |
O23 |
179.6 |
355.1 |
S20 |
C18 |
C21 |
O24 |
0.0 |
175.0 |
C19 |
C22 |
S20 |
C18 |
359.7 |
0.0 |
C18 |
S20 |
C22 |
H22 |
179.8 |
180.0 |
C21 |
C18 |
C15 |
C19 |
180.1 |
179.8 |
C15 |
C18 |
C21 |
S20 |
179.8 |
179.7 |
C21 |
C18 |
S20 |
C22 |
180.0 |
180.0 |
O23 |
C21 |
C18 |
O24 |
179.6 |
180.0 |
C18 |
C21 |
O23 |
H23 |
180.0 |
180.0 |
C15 |
C19 |
C22 |
H19 |
179.9 |
179.7 |
C18 |
S20 |
C22 |
C19 |
359.7 |
0.0 |
S20 |
C22 |
C19 |
H22 |
180.0 |
179.9 |
C15 |
C19 |
H19 |
C22 |
180.1 |
180.3 |
H19 |
C19 |
C22 |
S20 |
180.3 |
180.0 |
H19 |
C19 |
C22 |
H22 |
0.2 |
0.0 |
C22 |
S20 |
C18 |
C21 |
180.0 |
180.0 |
S20 |
C22 |
C19 |
H19 |
180.3 |
180.0 |
C19 |
C22 |
S20 |
H22 |
180.0 |
180.1 |
C18 |
C21 |
O23 |
O24 |
180.4 |
180.0 |
C18 |
C21 |
O24 |
O23 |
179.6 |
180.0 |
O24 |
C21 |
O23 |
H23 |
359.6 |
0.0 |
H22 |
C22 |
C19 |
H19 |
0.2 |
0.0 |
C19 |
C22 |
H22 |
S20 |
180.1 |
179.9 |
H23 |
O23 |
C21 |
O24 |
359.6 |
0.0 |