PDB Chemical Component NRO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NRO
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.527 |
1.530 |
C2 |
C3 |
1.547 |
1.530 |
C3 |
C4 |
1.536 |
1.508 |
C4 |
C8 |
1.563 |
1.362 |
C4 |
N5 |
1.508 |
1.482 |
C8 |
C10 |
1.557 |
1.396 |
C10 |
O11 |
1.365 |
1.348 |
C10 |
C12 |
1.333 |
1.473 |
C14 |
C15 |
1.427 |
1.413 |
C14 |
O11 |
1.381 |
1.346 |
C14 |
C13 |
1.349 |
1.469 |
C15 |
C16 |
1.434 |
1.409 |
C15 |
C17 |
1.438 |
1.412 |
C16 |
C20 |
1.443 |
1.389 |
C17 |
C18 |
1.431 |
1.376 |
C19 |
C20 |
1.457 |
1.401 |
C19 |
C18 |
1.420 |
1.386 |
C20 |
C21 |
1.540 |
1.478 |
C21 |
O22 |
1.250 |
1.214 |
C21 |
O23 |
1.258 |
1.348 |
N5 |
O6 |
1.414 |
1.318 |
N5 |
O7 |
1.428 |
1.316 |
C12 |
C13 |
1.331 |
1.354 |
C1 |
H1 |
1.100 |
1.090 |
C1 |
H1A |
1.100 |
1.090 |
C1 |
H1B |
1.100 |
1.090 |
C2 |
H2 |
1.100 |
1.090 |
C2 |
H2A |
1.100 |
1.090 |
C3 |
H3 |
1.100 |
1.090 |
C3 |
H3A |
1.100 |
1.091 |
C8 |
H8 |
1.079 |
1.081 |
C16 |
H16 |
1.080 |
1.080 |
C17 |
H17 |
1.080 |
1.080 |
C19 |
H19 |
1.080 |
1.080 |
C12 |
H12 |
1.080 |
1.080 |
C13 |
H13 |
1.080 |
1.080 |
C18 |
H18 |
1.080 |
1.080 |
O23 |
HO23 |
0.950 |
0.967 |
Bond Angles for NRO
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
111.0 |
109.5 |
C2 |
C1 |
H1 |
109.5 |
109.5 |
C2 |
C1 |
H1A |
109.4 |
109.5 |
C2 |
C1 |
H1B |
109.5 |
109.5 |
C1 |
C2 |
H2 |
109.0 |
109.5 |
C1 |
C2 |
H2A |
108.6 |
109.5 |
C2 |
C3 |
C4 |
112.1 |
109.5 |
C3 |
C2 |
H2 |
109.0 |
109.5 |
C3 |
C2 |
H2A |
108.6 |
109.4 |
C2 |
C3 |
H3 |
108.6 |
109.5 |
C2 |
C3 |
H3A |
108.0 |
109.5 |
C3 |
C4 |
C8 |
112.9 |
120.0 |
C3 |
C4 |
N5 |
109.6 |
120.0 |
C4 |
C3 |
H3 |
108.6 |
109.5 |
C4 |
C3 |
H3A |
108.1 |
109.4 |
C8 |
C4 |
N5 |
110.3 |
120.0 |
C4 |
C8 |
C10 |
111.8 |
120.0 |
C4 |
C8 |
H8 |
124.1 |
120.0 |
C4 |
N5 |
O6 |
119.0 |
120.0 |
C4 |
N5 |
O7 |
122.3 |
120.0 |
C8 |
C10 |
O11 |
125.4 |
125.8 |
C8 |
C10 |
C12 |
124.6 |
125.8 |
C10 |
C8 |
H8 |
124.1 |
120.0 |
O11 |
C10 |
C12 |
109.9 |
108.4 |
C10 |
O11 |
C14 |
105.2 |
109.6 |
C10 |
C12 |
C13 |
107.8 |
106.7 |
C10 |
C12 |
H12 |
126.1 |
126.7 |
C15 |
C14 |
O11 |
123.1 |
125.7 |
C15 |
C14 |
C13 |
129.1 |
125.8 |
C14 |
C15 |
C16 |
120.0 |
120.2 |
C14 |
C15 |
C17 |
120.6 |
120.2 |
O11 |
C14 |
C13 |
107.8 |
108.5 |
C14 |
C13 |
C12 |
109.2 |
106.8 |
C14 |
C13 |
H13 |
125.4 |
126.6 |
C16 |
C15 |
C17 |
119.3 |
119.6 |
C15 |
C16 |
C20 |
120.2 |
119.6 |
C15 |
C16 |
H16 |
119.9 |
120.2 |
C15 |
C17 |
C18 |
121.6 |
120.0 |
C15 |
C17 |
H17 |
119.2 |
120.0 |
C16 |
C20 |
C19 |
118.9 |
120.0 |
C16 |
C20 |
C21 |
121.0 |
120.0 |
C20 |
C16 |
H16 |
119.9 |
120.2 |
C17 |
C18 |
C19 |
118.8 |
120.4 |
C18 |
C17 |
H17 |
119.2 |
120.0 |
C17 |
C18 |
H18 |
120.6 |
119.8 |
C20 |
C19 |
C18 |
121.2 |
120.4 |
C19 |
C20 |
C21 |
120.0 |
120.0 |
C20 |
C19 |
H19 |
119.4 |
119.8 |
C18 |
C19 |
H19 |
119.4 |
119.8 |
C19 |
C18 |
H18 |
120.6 |
119.8 |
C20 |
C21 |
O22 |
120.0 |
120.0 |
C20 |
C21 |
O23 |
118.0 |
120.0 |
O22 |
C21 |
O23 |
122.1 |
120.0 |
C21 |
O23 |
HO23 |
109.5 |
117.0 |
O6 |
N5 |
O7 |
118.7 |
120.0 |
C13 |
C12 |
H12 |
126.1 |
126.6 |
C12 |
C13 |
H13 |
125.4 |
126.6 |
H1 |
C1 |
H1A |
109.5 |
109.5 |
H1 |
C1 |
H1B |
109.5 |
109.4 |
H1A |
C1 |
H1B |
109.5 |
109.5 |
H2 |
C2 |
H2A |
110.7 |
109.5 |
H3 |
C3 |
H3A |
111.5 |
109.5 |
Torsion Angles for NRO
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
C4 |
181.4 |
180.0 |
C3 |
C2 |
C1 |
H2 |
240.0 |
240.0 |
C3 |
C2 |
C1 |
H2A |
119.3 |
120.0 |
C1 |
C2 |
C3 |
H3 |
301.4 |
300.0 |
C1 |
C2 |
C3 |
H3A |
62.4 |
60.0 |
H1 |
C1 |
C2 |
H1A |
240.0 |
240.0 |
H1 |
C1 |
C2 |
H1B |
120.0 |
120.0 |
H1A |
C1 |
C2 |
H1B |
240.0 |
240.0 |
H2 |
C2 |
C1 |
H2A |
239.4 |
240.0 |
C3 |
C2 |
C1 |
H1 |
295.0 |
300.0 |
C3 |
C2 |
C1 |
H1A |
55.0 |
60.0 |
C3 |
C2 |
C1 |
H1B |
175.0 |
180.0 |
C1 |
C2 |
C3 |
H2 |
120.0 |
120.0 |
C1 |
C2 |
C3 |
H2A |
240.7 |
240.0 |
C2 |
C3 |
C4 |
C8 |
195.2 |
95.0 |
C2 |
C3 |
C4 |
N5 |
71.8 |
275.1 |
C4 |
C3 |
C2 |
H3 |
240.0 |
240.0 |
C4 |
C3 |
C2 |
H3A |
118.9 |
120.0 |
H2 |
C2 |
C3 |
H2A |
120.6 |
120.0 |
H3 |
C3 |
C2 |
H3A |
238.9 |
240.0 |
C4 |
C3 |
C2 |
H2 |
61.3 |
60.0 |
C4 |
C3 |
C2 |
H2A |
300.7 |
300.0 |
C2 |
C3 |
C4 |
H3 |
120.0 |
120.0 |
C2 |
C3 |
C4 |
H3A |
241.1 |
240.0 |
C8 |
C4 |
C3 |
N5 |
123.4 |
179.9 |
C3 |
C4 |
C8 |
C10 |
245.0 |
174.6 |
C3 |
C4 |
C8 |
H8 |
65.0 |
354.6 |
C3 |
C4 |
N5 |
O6 |
194.5 |
274.7 |
C3 |
C4 |
N5 |
O7 |
13.8 |
94.8 |
H3 |
C3 |
C4 |
H3A |
121.1 |
120.0 |
C3 |
C4 |
C8 |
N5 |
237.0 |
180.1 |
C8 |
C4 |
C3 |
H3 |
75.2 |
335.0 |
C8 |
C4 |
C3 |
H3A |
314.0 |
215.0 |
C8 |
C4 |
N5 |
O6 |
69.6 |
94.8 |
C8 |
C4 |
N5 |
O7 |
248.9 |
274.8 |
C4 |
C8 |
C10 |
O11 |
66.1 |
5.1 |
C4 |
C8 |
C10 |
C12 |
246.1 |
184.8 |
C10 |
C8 |
C4 |
H8 |
180.0 |
180.0 |
C3 |
C4 |
N5 |
C8 |
124.9 |
179.9 |
N5 |
C4 |
C3 |
H3 |
311.8 |
155.0 |
N5 |
C4 |
C3 |
H3A |
190.6 |
35.1 |
N5 |
C4 |
C8 |
C10 |
8.1 |
354.5 |
N5 |
C4 |
C8 |
H8 |
188.0 |
174.5 |
O6 |
N5 |
C4 |
O7 |
180.7 |
179.9 |
C10 |
C8 |
C4 |
N5 |
8.1 |
354.5 |
C4 |
C8 |
C10 |
H8 |
180.0 |
180.0 |
O11 |
C10 |
C8 |
C12 |
180.0 |
180.2 |
C8 |
C10 |
O11 |
C14 |
179.7 |
180.0 |
C8 |
C10 |
C12 |
C13 |
180.1 |
179.9 |
C8 |
C10 |
C12 |
H12 |
0.1 |
360.0 |
C8 |
C10 |
O11 |
C12 |
180.0 |
179.8 |
O11 |
C10 |
C8 |
H8 |
246.1 |
185.1 |
O11 |
C10 |
C12 |
C13 |
0.1 |
359.7 |
O11 |
C10 |
C12 |
H12 |
180.1 |
179.7 |
C15 |
C14 |
O11 |
C10 |
180.6 |
180.0 |
C10 |
O11 |
C14 |
C13 |
0.3 |
359.9 |
C8 |
C10 |
C12 |
O11 |
180.0 |
180.2 |
C12 |
C10 |
C8 |
H8 |
66.1 |
4.8 |
C12 |
C10 |
O11 |
C14 |
359.8 |
0.2 |
C14 |
C13 |
C12 |
C10 |
0.1 |
0.2 |
C13 |
C12 |
C10 |
H12 |
180.0 |
180.0 |
C10 |
C12 |
C13 |
H13 |
180.0 |
180.1 |
C10 |
O11 |
C14 |
C15 |
180.6 |
180.0 |
O11 |
C14 |
C15 |
C13 |
179.6 |
179.9 |
C15 |
C14 |
C13 |
C12 |
179.4 |
179.9 |
C15 |
C14 |
C13 |
H13 |
359.5 |
359.9 |
C16 |
C15 |
C14 |
C17 |
179.9 |
180.3 |
C14 |
C15 |
C16 |
C20 |
179.9 |
180.0 |
C14 |
C15 |
C16 |
H16 |
359.9 |
359.9 |
C14 |
C15 |
C17 |
C18 |
180.0 |
180.1 |
C14 |
C15 |
C17 |
H17 |
360.0 |
0.0 |
C14 |
O11 |
C10 |
C12 |
359.8 |
0.2 |
C15 |
C14 |
O11 |
C13 |
180.3 |
180.1 |
O11 |
C14 |
C15 |
C16 |
328.0 |
0.1 |
O11 |
C14 |
C15 |
C17 |
148.1 |
179.8 |
O11 |
C14 |
C13 |
C12 |
359.8 |
359.9 |
O11 |
C14 |
C13 |
H13 |
179.8 |
180.0 |
C10 |
C12 |
C13 |
C14 |
0.1 |
0.2 |
C15 |
C14 |
C13 |
O11 |
179.7 |
179.9 |
C13 |
C14 |
C15 |
C16 |
148.4 |
180.2 |
C13 |
C14 |
C15 |
C17 |
328.4 |
359.9 |
C14 |
C13 |
C12 |
H12 |
180.1 |
180.2 |
C12 |
C13 |
C14 |
H13 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
O11 |
328.0 |
0.1 |
C16 |
C15 |
C14 |
C13 |
148.4 |
180.2 |
C14 |
C15 |
C16 |
C17 |
180.1 |
179.7 |
C16 |
C15 |
C17 |
C18 |
0.0 |
359.8 |
C16 |
C15 |
C17 |
H17 |
180.0 |
179.7 |
C15 |
C16 |
C20 |
C19 |
0.1 |
359.9 |
C15 |
C16 |
C20 |
C21 |
180.0 |
180.0 |
C20 |
C16 |
C15 |
H16 |
180.0 |
180.1 |
C17 |
C15 |
C14 |
O11 |
148.1 |
179.8 |
C17 |
C15 |
C14 |
C13 |
328.4 |
359.9 |
C14 |
C15 |
C17 |
C16 |
179.9 |
180.3 |
C17 |
C15 |
C16 |
C20 |
359.9 |
0.3 |
C17 |
C15 |
C16 |
H16 |
179.9 |
180.2 |
C15 |
C17 |
C18 |
C19 |
0.1 |
359.9 |
C18 |
C17 |
C15 |
H17 |
180.0 |
180.1 |
C15 |
C17 |
C18 |
H18 |
180.1 |
179.9 |
C20 |
C16 |
C15 |
C17 |
359.9 |
0.3 |
C15 |
C16 |
C20 |
H16 |
180.0 |
179.9 |
C16 |
C20 |
C19 |
C18 |
360.0 |
359.8 |
C19 |
C20 |
C16 |
C21 |
180.1 |
179.9 |
C16 |
C20 |
C19 |
H19 |
180.0 |
180.0 |
C16 |
C20 |
C21 |
O22 |
359.4 |
359.9 |
C16 |
C20 |
C21 |
O23 |
179.3 |
180.0 |
C15 |
C17 |
C18 |
H17 |
180.0 |
179.9 |
C20 |
C19 |
C18 |
C17 |
359.9 |
0.3 |
C17 |
C18 |
C19 |
H19 |
179.9 |
180.0 |
C19 |
C18 |
C17 |
H18 |
180.0 |
180.0 |
C16 |
C20 |
C19 |
C21 |
179.9 |
180.1 |
C19 |
C20 |
C16 |
H16 |
180.1 |
180.0 |
C17 |
C18 |
C19 |
C20 |
359.9 |
0.3 |
C18 |
C19 |
C20 |
H19 |
180.0 |
179.8 |
C20 |
C19 |
C18 |
H18 |
179.9 |
180.3 |
C19 |
C20 |
C21 |
O22 |
179.2 |
180.0 |
C19 |
C20 |
C21 |
O23 |
359.2 |
0.0 |
C19 |
C18 |
C17 |
H17 |
180.1 |
180.0 |
C17 |
C18 |
C19 |
H18 |
180.0 |
180.0 |
C18 |
C19 |
C20 |
C21 |
180.1 |
179.7 |
C20 |
C19 |
C18 |
H19 |
180.0 |
180.2 |
C16 |
C20 |
C21 |
C19 |
180.1 |
179.9 |
C21 |
C20 |
C16 |
H16 |
360.0 |
0.1 |
C21 |
C20 |
C19 |
C18 |
180.1 |
179.7 |
C21 |
C20 |
C19 |
H19 |
0.1 |
360.0 |
O22 |
C21 |
C20 |
O23 |
180.1 |
180.0 |
C20 |
C21 |
O23 |
HO23 |
180.1 |
180.0 |
C20 |
C21 |
O22 |
O23 |
179.9 |
180.0 |
O22 |
C21 |
O23 |
HO23 |
360.0 |
0.0 |
C20 |
C21 |
O23 |
O22 |
180.1 |
180.0 |
C4 |
N5 |
O6 |
O7 |
179.3 |
180.1 |
C4 |
N5 |
O7 |
O6 |
180.7 |
179.9 |
C10 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
H1 |
C1 |
C2 |
C3 |
295.0 |
300.0 |
C2 |
C1 |
H1 |
H1A |
120.0 |
120.0 |
C2 |
C1 |
H1 |
H1B |
240.0 |
240.0 |
H1 |
C1 |
C2 |
H2 |
55.0 |
60.0 |
H1 |
C1 |
C2 |
H2A |
175.6 |
180.0 |
H1A |
C1 |
H1 |
H1B |
120.0 |
120.0 |
H1A |
C1 |
C2 |
C3 |
55.0 |
60.0 |
C2 |
C1 |
H1A |
H1 |
240.0 |
240.0 |
C2 |
C1 |
H1A |
H1B |
120.0 |
120.0 |
H1A |
C1 |
C2 |
H2 |
175.0 |
180.0 |
H1A |
C1 |
C2 |
H2A |
295.6 |
300.0 |
H1 |
C1 |
H1A |
H1B |
240.0 |
240.0 |
H1B |
C1 |
C2 |
C3 |
175.0 |
180.0 |
C2 |
C1 |
H1B |
H1 |
120.0 |
120.0 |
C2 |
C1 |
H1B |
H1A |
240.0 |
240.0 |
H1B |
C1 |
C2 |
H2 |
295.0 |
300.0 |
H1B |
C1 |
C2 |
H2A |
55.7 |
60.0 |
H1 |
C1 |
H1B |
H1A |
120.0 |
120.0 |
C1 |
C2 |
H2 |
C3 |
238.7 |
240.0 |
H2 |
C2 |
C1 |
H1 |
55.0 |
60.0 |
H2 |
C2 |
C1 |
H1A |
175.0 |
180.0 |
H2 |
C2 |
C1 |
H1B |
295.0 |
300.0 |
C1 |
C2 |
H2 |
H2A |
119.3 |
120.0 |
H2 |
C2 |
C3 |
C4 |
61.3 |
60.0 |
C3 |
C2 |
H2 |
H2A |
240.6 |
240.0 |
H2 |
C2 |
C3 |
H3 |
181.3 |
180.0 |
H2 |
C2 |
C3 |
H3A |
302.4 |
300.0 |
C1 |
C2 |
H2A |
C3 |
120.9 |
120.0 |
H2A |
C2 |
C1 |
H1 |
175.6 |
180.0 |
H2A |
C2 |
C1 |
H1A |
295.6 |
300.0 |
H2A |
C2 |
C1 |
H1B |
55.7 |
60.0 |
C1 |
C2 |
H2A |
H2 |
240.4 |
240.0 |
H2A |
C2 |
C3 |
C4 |
300.7 |
300.0 |
C3 |
C2 |
H2A |
H2 |
119.6 |
120.0 |
H2A |
C2 |
C3 |
H3 |
60.7 |
60.0 |
H2A |
C2 |
C3 |
H3A |
181.8 |
180.0 |
C2 |
C3 |
H3 |
C4 |
237.9 |
240.0 |
H3 |
C3 |
C2 |
H2 |
181.3 |
180.0 |
H3 |
C3 |
C2 |
H2A |
60.7 |
60.0 |
C2 |
C3 |
H3 |
H3A |
118.9 |
120.0 |
H3 |
C3 |
C4 |
C8 |
75.2 |
335.0 |
H3 |
C3 |
C4 |
N5 |
311.8 |
155.0 |
C4 |
C3 |
H3 |
H3A |
241.0 |
240.0 |
C2 |
C3 |
H3A |
C4 |
121.4 |
120.0 |
H3A |
C3 |
C2 |
H2 |
302.4 |
300.0 |
H3A |
C3 |
C2 |
H2A |
181.8 |
180.0 |
C2 |
C3 |
H3A |
H3 |
240.7 |
240.0 |
H3A |
C3 |
C4 |
C8 |
314.0 |
215.0 |
H3A |
C3 |
C4 |
N5 |
190.6 |
35.1 |
C4 |
C3 |
H3A |
H3 |
119.3 |
120.0 |
H8 |
C8 |
C4 |
N5 |
188.0 |
174.5 |
C4 |
C8 |
H8 |
C10 |
180.0 |
180.0 |
H8 |
C8 |
C10 |
O11 |
246.1 |
185.1 |
H8 |
C8 |
C10 |
C12 |
66.1 |
4.8 |
H16 |
C16 |
C15 |
C17 |
179.9 |
180.2 |
C15 |
C16 |
H16 |
C20 |
180.0 |
180.1 |
H16 |
C16 |
C20 |
C19 |
180.1 |
180.0 |
H16 |
C16 |
C20 |
C21 |
360.0 |
0.1 |
C15 |
C17 |
H17 |
C18 |
180.0 |
180.1 |
H17 |
C17 |
C18 |
C19 |
180.1 |
180.0 |
H17 |
C17 |
C18 |
H18 |
0.1 |
360.0 |
C20 |
C19 |
H19 |
C18 |
180.0 |
179.8 |
H19 |
C19 |
C20 |
C21 |
0.1 |
360.0 |
H19 |
C19 |
C18 |
H18 |
359.9 |
0.0 |
C10 |
C12 |
H12 |
C13 |
180.0 |
180.0 |
H12 |
C12 |
C13 |
H13 |
0.0 |
0.1 |
C14 |
C13 |
H13 |
C12 |
180.0 |
179.9 |
H13 |
C13 |
C12 |
H12 |
0.0 |
0.1 |
C17 |
C18 |
H18 |
C19 |
180.0 |
180.0 |
H18 |
C18 |
C17 |
H17 |
0.1 |
360.0 |
H18 |
C18 |
C19 |
H19 |
359.9 |
0.0 |