PDB Chemical Component NP8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NP8

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C01	O05	1.427	1.429
O05	C06	1.376	1.359
C06	C07	1.385	1.388
C06	C13	1.386	1.389
C07	N09	1.338	1.318
N09	C10	1.338	1.318
C10	C12	1.391	1.394
C12	C13	1.392	1.398
C12	C15	1.492	1.481
C15	C16	1.383	1.389
C15	C50	1.405	1.412
C16	N18	1.340	1.321
N18	C19	1.347	1.322
C19	N20	1.350	1.389
C19	C38	1.425	1.401
N20	C22	1.462	1.465
C22	C24	1.519	1.531
C22	C35	1.518	1.532
C24	C27	1.513	1.531
C27	N30	1.467	1.468
N30	C32	1.468	1.468
C32	C35	1.515	1.531
C38	N39	1.383	1.377
C38	C50	1.396	1.405
N39	C41	1.352	1.345
C41	O42	1.231	1.218
C41	C43	1.457	1.413
C43	C44	1.503	1.507
C43	C48	1.359	1.357
C48	C50	1.442	1.460
C01	H011	1.100	1.091
C01	H012	1.100	1.091
C01	H013	1.100	1.090
C07	H07	1.080	1.080
C13	H13	1.080	1.079
C10	H10	1.080	1.080
C16	H16	1.080	1.081
N20	H20	1.000	0.970
C22	H22	1.100	1.090
C24	H241	1.100	1.089
C24	H242	1.100	1.090
C35	H351	1.100	1.090
C35	H352	1.100	1.090
C27	H271	1.100	1.090
C27	H272	1.100	1.090
N30	H30	1.000	1.009
C32	H321	1.100	1.090
C32	H322	1.100	1.090
N39	H39	1.000	0.970
C44	H441	1.100	1.090
C44	H442	1.100	1.090
C44	H443	1.100	1.090
C48	H48	1.080	1.080

Bond Angles for NP8

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C01	O05	C06	118.0	117.0
O05	C01	H011	109.5	109.5
O05	C01	H012	109.4	109.5
O05	C01	H013	109.4	109.5
O05	C06	C07	123.9	120.5
O05	C06	C13	117.4	120.3
C07	C06	C13	118.7	119.2
C06	C07	N09	122.5	121.0
C06	C07	H07	118.8	119.5
C06	C13	C12	120.0	118.2
C06	C13	H13	120.0	120.9
C07	N09	C10	117.8	121.9
N09	C07	H07	118.7	119.5
N09	C10	C12	124.3	120.7
N09	C10	H10	117.8	119.7
C10	C12	C13	116.6	119.0
C10	C12	C15	121.2	120.5
C12	C10	H10	117.8	119.7
C13	C12	C15	122.2	120.5
C12	C13	H13	120.0	120.9
C12	C15	C16	120.2	120.8
C12	C15	C50	123.0	120.8
C16	C15	C50	116.7	118.4
C15	C16	N18	125.3	121.2
C15	C16	H16	117.3	119.4
C15	C50	C38	118.3	118.7
C15	C50	C48	124.9	122.0
C16	N18	C19	119.8	122.6
N18	C16	H16	117.4	119.4
N18	C19	N20	117.2	119.8
N18	C19	C38	118.2	120.4
N20	C19	C38	124.6	119.8
C19	N20	C22	124.2	120.0
C19	N20	H20	105.6	120.0
C19	C38	N39	118.8	121.7
C19	C38	C50	121.7	118.7
N20	C22	C24	110.0	109.5
N20	C22	C35	109.9	109.5
C22	N20	H20	105.7	120.0
N20	C22	H22	109.2	109.5
C24	C22	C35	110.7	109.2
C22	C24	C27	111.8	109.2
C24	C22	H22	108.4	109.6
C22	C24	H241	108.9	109.6
C22	C24	H242	108.9	109.5
C22	C35	C32	112.6	109.2
C35	C22	H22	108.5	109.6
C22	C35	H351	108.7	109.5
C22	C35	H352	108.7	109.5
C24	C27	N30	109.9	109.5
C27	C24	H241	108.9	109.5
C27	C24	H242	108.9	109.5
C24	C27	H271	109.4	109.5
C24	C27	H272	109.4	109.5
C27	N30	C32	110.9	111.2
N30	C27	H271	109.3	109.5
N30	C27	H272	109.4	109.5
C27	N30	H30	109.1	111.0
N30	C32	C35	110.0	109.5
C32	N30	H30	109.1	111.0
N30	C32	H321	109.3	109.5
N30	C32	H322	109.3	109.5
C32	C35	H351	108.7	109.5
C32	C35	H352	108.7	109.5
C35	C32	H321	109.4	109.4
C35	C32	H322	109.4	109.5
N39	C38	C50	119.5	119.6
C38	N39	C41	125.2	120.9
C38	N39	H39	117.4	119.5
C38	C50	C48	116.9	119.3
N39	C41	O42	118.9	119.2
N39	C41	C43	116.4	121.6
C41	N39	H39	117.4	119.6
O42	C41	C43	124.6	119.2
C41	C43	C44	118.9	119.9
C41	C43	C48	119.6	120.2
C44	C43	C48	121.5	119.9
C43	C44	H441	109.5	109.5
C43	C44	H442	109.5	109.5
C43	C44	H443	109.4	109.5
C43	C48	C50	122.4	118.4
C43	C48	H48	118.8	120.8
C50	C48	H48	118.8	120.8
H011	C01	H012	109.5	109.4
H011	C01	H013	109.4	109.4
H012	C01	H013	109.5	109.5
H241	C24	H242	109.5	109.5
H351	C35	H352	109.5	109.6
H271	C27	H272	109.5	109.4
H321	C32	H322	109.5	109.4
H441	C44	H442	109.5	109.5
H441	C44	H443	109.5	109.5
H442	C44	H443	109.5	109.4

Torsion Angles for NP8

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C01	O05	C06	C07	4.6	360.0
C01	O05	C06	C13	184.7	179.7
H011	C01	O05	H012	240.0	240.0
H011	C01	O05	H013	120.0	120.0
H012	C01	O05	H013	240.0	240.0
C06	O05	C01	H011	180.0	180.0
C06	O05	C01	H012	300.0	300.0
C06	O05	C01	H013	60.0	60.0
C07	C06	O05	C13	179.9	180.3
O05	C06	C07	N09	180.0	180.0
O05	C06	C07	H07	0.0	0.0
O05	C06	C13	C12	179.1	179.7
O05	C06	C13	H13	359.0	0.0
O05	C06	C07	C13	180.1	179.7
C07	C06	C13	C12	359.1	359.4
C07	C06	C13	H13	179.1	179.8
C06	C07	N09	C10	359.8	0.0
N09	C07	C06	H07	180.0	179.9
O05	C06	C13	C07	179.9	180.3
C13	C06	C07	N09	359.9	0.3
C13	C06	C07	H07	179.9	180.3
C10	C12	C13	C06	1.9	0.6
C06	C13	C12	C15	178.8	180.3
C12	C13	C06	H13	180.0	179.7
N09	C07	C06	C13	359.9	0.3
C06	C07	N09	H07	180.0	180.1
C07	N09	C10	C12	1.4	0.0
C07	N09	C10	H10	181.4	179.9
C10	N09	C07	H07	179.8	180.0
N09	C10	C12	C13	357.7	359.6
N09	C10	C12	C15	180.8	180.0
C12	C10	N09	H10	180.0	180.1
C06	C13	C12	C10	1.9	0.6
N09	C10	C12	H10	180.0	179.9
C13	C12	C10	C15	176.9	179.7
C10	C12	C13	H13	182.0	180.3
C10	C12	C15	C16	124.1	130.0
C10	C12	C15	C50	307.3	309.7
C06	C13	C12	H13	180.0	180.3
C10	C12	C13	C15	183.2	180.3
C13	C12	C10	H10	177.7	179.7
C13	C12	C15	C16	307.4	310.3
C13	C12	C15	C50	130.6	130.0
C10	C12	C15	C13	176.7	179.7
C15	C12	C10	H10	0.8	0.1
C15	C12	C13	H13	358.8	360.0
C16	C15	C12	C50	176.8	180.3
C12	C15	C16	N18	181.8	180.0
C12	C15	C16	H16	1.8	0.0
C12	C15	C50	C38	178.1	179.7
C12	C15	C50	C48	356.9	0.5
C12	C15	C16	C50	183.0	179.7
C16	C15	C50	C38	1.2	359.5
C16	C15	C50	C48	180.0	180.2
C15	C16	N18	C19	0.8	360.0
N18	C16	C15	H16	180.0	180.0
C12	C15	C50	C16	176.9	180.3
C50	C15	C16	N18	358.8	0.3
C50	C15	C16	H16	178.8	180.3
C19	C38	C50	C15	359.1	0.5
N39	C38	C50	C15	179.4	180.3
C38	C50	C15	C48	181.2	179.2
C43	C48	C50	C15	180.6	179.7
C15	C50	C48	H48	0.6	359.4
N18	C16	C15	C50	358.8	0.3
C15	C16	N18	H16	180.0	180.0
C16	N18	C19	N20	180.3	180.0
C16	N18	C19	C38	359.6	0.0
C19	N18	C16	H16	180.7	180.0
N20	C19	N18	C38	180.6	180.0
N18	C19	N20	C22	352.8	360.0
N18	C19	N20	H20	114.8	180.0
N18	C19	C38	N39	180.2	180.0
N18	C19	C38	C50	0.5	359.7
N18	C19	N20	C38	179.3	180.0
N20	C19	C38	N39	359.5	360.0
N20	C19	C38	C50	179.8	179.7
C19	N20	C22	C24	103.3	155.0
C19	N20	C22	C35	225.5	274.7
C22	N20	C19	H20	238.0	179.9
C19	N20	C22	H22	344.4	34.9
C15	C50	C38	C19	359.1	0.5
N18	C19	C38	N20	180.7	180.0
C38	C19	N20	C22	173.5	180.0
C38	C19	N20	H20	295.5	0.0
N39	C38	C19	C50	179.7	180.3
C19	C38	N39	C41	180.2	180.0
C19	C38	N39	H39	0.2	360.0
C19	C38	C50	C48	180.2	179.8
C22	N20	C19	C38	173.5	180.0
C19	N20	C22	H20	122.0	180.1
C24	C22	N20	C35	237.8	240.4
N20	C22	C24	C27	172.1	177.6
C24	C22	N20	H22	118.9	120.1
N20	C22	C24	H241	292.5	297.5
N20	C22	C24	H242	51.8	57.7
N20	C22	C35	C32	188.6	182.5
C35	C22	N20	H22	241.1	239.8
N20	C22	C35	H351	309.1	302.4
N20	C22	C35	H352	68.1	62.6
N20	C22	C24	C35	121.7	119.9
C24	C22	N20	H20	341.4	335.0
N20	C22	C24	H22	240.6	239.9
C24	C22	C35	C32	310.3	302.3
C35	C22	C24	H22	118.9	120.1
C24	C22	C35	H351	70.8	62.2
C24	C22	C35	H352	189.9	182.4
C22	C24	C27	N30	303.3	300.8
C27	C24	C22	H241	239.6	240.1
C27	C24	C22	H242	120.4	119.9
C22	C24	C27	H271	63.3	60.8
C22	C24	C27	H272	183.2	180.8
H241	C24	C22	H242	240.7	239.8
N20	C22	C35	C24	238.2	240.2
C35	C22	N20	H20	103.5	94.6
N20	C22	C35	H22	119.4	120.2
C35	C22	C24	C27	50.4	57.7
C24	C22	C35	H22	241.1	240.0
C35	C22	C24	H241	170.8	177.6
C35	C22	C24	H242	290.1	297.8
N30	C32	C35	C22	54.8	59.2
C32	C35	C22	H351	239.5	240.1
C32	C35	C22	H352	120.5	119.9
C22	C35	C32	H321	294.7	299.2
C22	C35	C32	H322	174.9	179.2
H351	C35	C22	H352	240.9	239.8
C27	C24	C22	C35	50.4	57.7
C27	C24	C22	H22	291.5	297.6
C22	C24	C27	H241	120.4	120.0
C22	C24	C27	H242	239.6	240.1
C24	C27	N30	C32	62.1	61.7
N30	C27	C24	H271	240.0	240.0
N30	C27	C24	H272	120.1	120.0
C24	C27	N30	H30	182.3	185.8
H241	C24	C27	H242	119.3	120.1
H271	C27	C24	H272	240.1	240.0
N30	C27	C24	H241	182.9	180.8
N30	C27	C24	H242	63.6	60.7
C24	C27	N30	H271	120.1	120.0
C24	C27	N30	H272	239.9	240.0
C27	N30	C32	C35	299.0	298.3
C32	N30	C27	H30	239.8	235.9
C27	N30	C32	H321	59.1	58.2
C27	N30	C32	H322	179.0	178.2
H271	C27	N30	H272	119.9	120.0
C22	C35	C32	N30	54.8	59.2
C32	N30	C27	H271	302.1	301.7
C32	N30	C27	H272	182.2	181.8
C27	N30	C32	H30	120.2	124.1
N30	C32	C35	H351	294.3	299.2
N30	C32	C35	H352	175.3	179.1
C35	C32	N30	H321	239.9	240.0
C35	C32	N30	H322	120.1	120.1
H321	C32	N30	H322	240.2	240.0
C32	C35	C22	H22	69.2	62.3
C22	C35	C32	H351	120.5	120.0
C22	C35	C32	H352	239.5	240.1
C35	C32	N30	H30	178.9	174.2
N30	C32	C35	H321	120.1	120.0
N30	C32	C35	H322	239.9	239.9
H351	C35	C32	H352	119.1	120.2
H321	C32	C35	H322	119.9	119.9
C15	C50	C38	N39	179.4	180.3
C19	C38	N39	C50	180.3	179.7
N39	C38	C50	C48	0.5	359.5
C38	N39	C41	O42	179.9	180.0
C38	N39	C41	C43	359.7	360.0
C41	N39	C38	H39	180.0	180.0
C15	C50	C38	C48	178.9	180.8
C19	C38	C50	N39	179.7	180.3
C50	C38	N39	C41	359.9	0.3
C50	C38	N39	H39	179.9	180.3
C43	C48	C50	C38	359.4	0.5
C38	C50	C48	H48	179.4	180.2
C41	N39	C38	C50	359.9	0.3
C38	N39	C41	H39	180.0	180.0
O42	C41	N39	C43	180.2	180.0
N39	C41	C43	C44	180.2	180.0
N39	C41	C43	C48	0.2	0.0
N39	C41	O42	C43	179.8	180.0
O42	C41	N39	H39	359.9	360.0
O42	C41	C43	C44	360.0	0.0
O42	C41	C43	C48	180.0	180.0
N39	C41	C43	O42	180.2	180.0
C43	C41	N39	H39	179.8	180.0
C44	C43	C41	C48	180.0	180.0
C41	C43	C44	H441	180.0	360.0
C41	C43	C44	H442	300.0	120.0
C41	C43	C44	H443	60.0	239.9
C41	C43	C48	C50	0.3	359.8
C41	C43	C48	H48	180.3	180.0
C41	C43	C44	C48	180.0	180.0
C44	C43	C48	C50	180.2	179.7
C44	C43	C48	H48	0.2	0.0
H441	C44	C43	H442	240.0	240.0
H441	C44	C43	H443	120.0	120.0
H442	C44	C43	H443	240.0	240.1
C15	C50	C48	C43	180.6	179.7
C38	C50	C48	C43	359.4	0.5
C41	C43	C48	C44	180.0	180.0
C48	C43	C44	H441	0.0	180.0
C48	C43	C44	H442	120.0	300.1
C48	C43	C44	H443	240.0	60.0
C50	C48	C43	H48	180.0	179.7
C15	C50	C48	C38	181.2	179.2
C43	C48	C50	H48	180.0	180.3
H011	C01	O05	C06	180.0	180.0
O05	C01	H011	H012	120.0	120.0
O05	C01	H011	H013	240.0	240.0
H012	C01	H011	H013	120.0	120.0
H012	C01	O05	C06	300.0	300.0
O05	C01	H012	H011	240.0	240.0
O05	C01	H012	H013	120.0	120.1
H011	C01	H012	H013	240.0	240.1
H013	C01	O05	C06	60.0	60.0
O05	C01	H013	H011	120.0	120.0
O05	C01	H013	H012	240.0	240.0
H011	C01	H013	H012	120.0	119.9
H07	C07	C06	C13	179.9	180.3
C06	C07	H07	N09	180.0	179.9
H07	C07	N09	C10	179.8	180.0
C06	C13	H13	C12	180.0	179.6
H13	C13	C12	C15	358.8	360.0
N09	C10	H10	C12	180.0	180.1
H10	C10	C12	C13	177.7	179.7
H10	C10	C12	C15	0.8	0.1
H16	C16	C15	C50	178.8	180.3
C15	C16	H16	N18	180.0	180.0
H16	C16	N18	C19	180.7	180.0
H20	N20	C19	C38	295.5	0.0
C19	N20	H20	C22	226.7	179.9
H20	N20	C22	C24	341.4	335.0
H20	N20	C22	C35	103.5	94.6
H20	N20	C22	H22	222.5	214.9
N20	C22	H22	C24	119.9	120.1
N20	C22	H22	C35	240.2	239.8
H22	C22	N20	H20	222.5	214.9
C24	C22	H22	C35	120.3	119.8
H22	C22	C24	C27	291.5	297.6
H22	C22	C24	H241	51.9	57.6
H22	C22	C24	H242	171.2	177.7
H22	C22	C35	C32	69.2	62.3
H22	C22	C35	H351	189.7	182.2
H22	C22	C35	H352	308.7	302.4
H241	C24	C22	C35	170.8	177.6
C22	C24	H241	C27	237.8	240.2
H241	C24	C22	H22	51.9	57.6
C22	C24	H241	H242	118.9	120.2
H241	C24	C27	N30	182.9	180.8
C27	C24	H241	H242	241.1	239.9
H241	C24	C27	H271	302.9	300.8
H241	C24	C27	H272	62.8	60.8
H242	C24	C22	C35	290.1	297.8
C22	C24	H242	C27	122.2	119.8
H242	C24	C22	H22	171.2	177.7
C22	C24	H242	H241	241.1	239.8
H242	C24	C27	N30	63.6	60.7
C27	C24	H242	H241	118.9	120.1
H242	C24	C27	H271	183.7	180.8
H242	C24	C27	H272	303.5	300.7
C22	C35	H351	C32	237.1	240.2
H351	C35	C22	H22	189.7	182.2
C22	C35	H351	H352	118.6	120.1
C32	C35	H351	H352	241.4	239.9
H351	C35	C32	H321	174.3	179.2
H351	C35	C32	H322	54.4	59.3
C22	C35	H352	C32	122.9	119.7
H352	C35	C22	H22	308.7	302.4
C22	C35	H352	H351	241.4	239.9
C32	C35	H352	H351	118.6	120.1
H352	C35	C32	H321	55.2	59.1
H352	C35	C32	H322	295.4	299.1
C24	C27	H271	N30	239.6	239.9
H271	C27	C24	H241	302.9	300.8
H271	C27	C24	H242	183.7	180.8
C24	C27	H271	H272	119.8	120.0
H271	C27	N30	C32	302.1	301.7
N30	C27	H271	H272	240.2	240.0
H271	C27	N30	H30	62.3	65.8
C24	C27	H272	N30	120.4	120.1
H272	C27	C24	H241	62.8	60.8
H272	C27	C24	H242	303.5	300.7
C24	C27	H272	H271	240.2	240.0
H272	C27	N30	C32	182.2	181.8
N30	C27	H272	H271	119.8	120.0
H272	C27	N30	H30	302.4	305.9
C27	N30	H30	C32	238.7	235.8
H30	N30	C27	H271	62.3	65.8
H30	N30	C27	H272	302.4	305.9
H30	N30	C32	C35	178.9	174.2
H30	N30	C32	H321	298.9	294.2
H30	N30	C32	H322	58.8	54.1
N30	C32	H321	C35	239.5	240.0
H321	C32	N30	H30	298.9	294.2
N30	C32	H321	H322	119.7	120.0
H321	C32	C35	H351	174.3	179.2
H321	C32	C35	H352	55.2	59.1
C35	C32	H321	H322	240.2	240.0
N30	C32	H322	C35	120.5	120.1
H322	C32	N30	H30	58.8	54.1
N30	C32	H322	H321	240.3	240.0
H322	C32	C35	H351	54.4	59.3
H322	C32	C35	H352	295.4	299.1
C35	C32	H322	H321	119.8	119.9
H39	N39	C38	C50	179.9	180.3
C38	N39	H39	C41	180.0	180.0
H39	N39	C41	O42	359.9	360.0
H39	N39	C41	C43	179.8	180.0
H441	C44	C43	C48	0.0	180.0
C43	C44	H441	H442	120.0	120.0
C43	C44	H441	H443	240.0	240.0
H442	C44	H441	H443	120.0	120.0
H442	C44	C43	C48	120.0	300.1
C43	C44	H442	H441	240.0	240.0
C43	C44	H442	H443	120.0	119.9
H441	C44	H442	H443	240.0	240.0
H443	C44	C43	C48	240.0	60.0
C43	C44	H443	H441	120.0	120.0
C43	C44	H443	H442	240.0	240.0
H441	C44	H443	H442	120.0	120.0
C43	C48	H48	C50	180.0	179.7